RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 CEP170Q5SW79 1584 aa9.71□□□□□ -0.85
HCG18-243ENST00000602498 PRG4Q92954 1404 aaPredicted RBP9.71□□□□□ -0.86
HCG18-243ENST00000602498 ERICH3Q5RHP9 1530 aa9.71□□□□□ -0.86
HCG18-243ENST00000602498 CARMIL1Q5VZK9 1371 aa9.69□□□□□ -0.86
HCG18-243ENST00000602498 RUSC2Q8N2Y8 1516 aa9.67□□□□□ -0.86
HCG18-243ENST00000602498 FAM9AQ8IZU1 332 aaPredicted RBP9.63□□□□□ -0.87
HCG18-243ENST00000602498 EHMT2Q96KQ7 1210 aa9.61□□□□□ -0.87
HCG18-243ENST00000602498 SENP3Q9H4L4 574 aaPredicted RBP9.61□□□□□ -0.87
HCG18-243ENST00000602498 KIAA0586Q9BVV6 1533 aa9.61□□□□□ -0.87
HCG18-243ENST00000602498 NPM1P06748 294 aaKnown RBP eCLIP9.6□□□□□ -0.87
HCG18-243ENST00000602498 RANGAP1P46060 587 aaPredicted RBP9.58□□□□□ -0.88
HCG18-243ENST00000602498 FAM69CQ0P6D2 419 aa9.58□□□□□ -0.88
HCG18-243ENST00000602498 PTPRGP23470 1445 aa9.57□□□□□ -0.88
HCG18-243ENST00000602498 SHROOM2Q13796 1616 aa9.56□□□□□ -0.88
HCG18-243ENST00000602498 RAPGEF2Q9Y4G8 1499 aa9.56□□□□□ -0.88
HCG18-243ENST00000602498 P3H3Q8IVL6 736 aa9.55□□□□□ -0.88
HCG18-243ENST00000602498 TNIKQ9UKE5 1360 aa9.54□□□□□ -0.88
HCG18-243ENST00000602498 ARID3CA6NKF2 412 aa9.54□□□□□ -0.88
HCG18-243ENST00000602498 CSRNP3Q8WYN3 585 aa9.53□□□□□ -0.88
HCG18-243ENST00000602498 CARMIL2Q6F5E8 1435 aa9.53□□□□□ -0.88
HCG18-243ENST00000602498 CUL7Q14999 1698 aa9.52□□□□□ -0.89
HCG18-243ENST00000602498 DISP1Q96F81 1524 aa9.49□□□□□ -0.89
HCG18-243ENST00000602498 PRXQ9BXM0 1461 aa9.48□□□□□ -0.89
HCG18-243ENST00000602498 IQGAP2Q13576 1575 aa9.48□□□□□ -0.89
HCG18-243ENST00000602498 UACAQ9BZF9 1416 aa9.47□□□□□ -0.89
HCG18-243ENST00000602498 ADCY10Q96PN6 1610 aa9.46□□□□□ -0.89
HCG18-243ENST00000602498 ABCC10Q5T3U5 1492 aa9.46□□□□□ -0.9
HCG18-243ENST00000602498 KCNH8Q96L42 1107 aa9.45□□□□□ -0.9
HCG18-243ENST00000602498 ASXL2Q76L83 1435 aa9.45□□□□□ -0.9
HCG18-243ENST00000602498 PLB1Q6P1J6 1458 aa9.44□□□□□ -0.9
HCG18-243ENST00000602498 ABCC2Q92887 1545 aa9.43□□□□□ -0.9
HCG18-243ENST00000602498 UGGT2Q9NYU1 1516 aa9.43□□□□□ -0.9
HCG18-243ENST00000602498 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.42□□□□□ -0.9
HCG18-243ENST00000602498 UBTFP17480 764 aaKnown RBP9.42□□□□□ -0.9
HCG18-243ENST00000602498 HNRNPUL2Q1KMD3 747 aaKnown RBP9.42□□□□□ -0.9
HCG18-243ENST00000602498 MAPKBP1O60336 1514 aa9.41□□□□□ -0.9
HCG18-243ENST00000602498 KIAA0556O60303 1618 aa9.4□□□□□ -0.9
HCG18-243ENST00000602498 UHRF1BP1LA0JNW5 1464 aa9.39□□□□□ -0.91
HCG18-243ENST00000602498 DIP2BQ9P265 1576 aa9.38□□□□□ -0.91
HCG18-243ENST00000602498 ATP1B4Q9UN42 357 aaPredicted RBP9.38□□□□□ -0.91
HCG18-243ENST00000602498 GOLGA3Q08378 1498 aa9.38□□□□□ -0.91
HCG18-243ENST00000602498 FHOD3Q2V2M9 1422 aa9.38□□□□□ -0.91
HCG18-243ENST00000602498 EEA1Q15075 1411 aa9.37□□□□□ -0.91
HCG18-243ENST00000602498 EPRSP07814 1512 aaKnown RBP9.36□□□□□ -0.91
HCG18-243ENST00000602498 KDM5BQ9UGL1 1544 aa9.36□□□□□ -0.91
HCG18-243ENST00000602498 WDR7Q9Y4E6 1490 aa9.34□□□□□ -0.91
HCG18-243ENST00000602498 ATP10BO94823 1461 aa9.32□□□□□ -0.92
HCG18-243ENST00000602498 COL17A1Q9UMD9 1497 aaPredicted RBP9.32□□□□□ -0.92
HCG18-243ENST00000602498 KDM4FA0A1W2PPD8 638 aa9.31□□□□□ -0.92
HCG18-243ENST00000602498 ABCA8O94911 1581 aa9.31□□□□□ -0.92
HCG18-243ENST00000602498 KIF13AQ9H1H9 1805 aa9.31□□□□□ -0.92
HCG18-243ENST00000602498 CD109Q6YHK3 1445 aa9.31□□□□□ -0.92
HCG18-243ENST00000602498 ZCCHC11Q5TAX3 1644 aaKnown RBP9.3□□□□□ -0.92
HCG18-243ENST00000602498 PLEKHD1A6NEE1 506 aa9.28□□□□□ -0.92
HCG18-243ENST00000602498 KDM6BO15054 1643 aa9.27□□□□□ -0.92
HCG18-243ENST00000602498 CTTNBP2Q8WZ74 1663 aa9.27□□□□□ -0.93
HCG18-243ENST00000602498 TSPOAP1O95153 1857 aa9.27□□□□□ -0.93
HCG18-243ENST00000602498 NUP153P49790 1475 aaKnown RBP9.27□□□□□ -0.93
HCG18-243ENST00000602498 GLI2P10070 1586 aa9.26□□□□□ -0.93
HCG18-243ENST00000602498 RAPGEF3O95398 923 aa9.26□□□□□ -0.93
HCG18-243ENST00000602498 SAMD9Q5K651 1589 aa9.24□□□□□ -0.93
HCG18-243ENST00000602498 TEX14Q8IWB6 1497 aa9.24□□□□□ -0.93
HCG18-243ENST00000602498 KIF21BO75037 1637 aa9.23□□□□□ -0.93
HCG18-243ENST00000602498 ARHGAP35Q9NRY4 1499 aa9.23□□□□□ -0.93
HCG18-243ENST00000602498 CDK13Q14004 1512 aaKnown RBP9.22□□□□□ -0.93
HCG18-243ENST00000602498 MAGI3Q5TCQ9 1506 aa9.21□□□□□ -0.93
HCG18-243ENST00000602498 RAPGEF6Q8TEU7 1601 aa9.2□□□□□ -0.94
HCG18-243ENST00000602498 PPRC1Q5VV67 1664 aaKnown RBP9.2□□□□□ -0.94
HCG18-243ENST00000602498 MAP3K4Q9Y6R4 1608 aa9.2□□□□□ -0.94
HCG18-243ENST00000602498 LOC105371045A0A1W2PR82 267 aa9.19□□□□□ -0.94
HCG18-243ENST00000602498 PLPPR3Q6T4P5 718 aa9.19□□□□□ -0.94
HCG18-243ENST00000602498 ARID4BQ4LE39 1312 aaPredicted RBP9.19□□□□□ -0.94
HCG18-243ENST00000602498 EFCAB5A4FU69 1503 aa9.19□□□□□ -0.94
HCG18-243ENST00000602498 FMN1Q68DA7 1419 aa9.18□□□□□ -0.94
HCG18-243ENST00000602498 ADGRL1O94910 1474 aa9.17□□□□□ -0.94
HCG18-243ENST00000602498 CDK11AQ9UQ88 783 aaPredicted RBP9.17□□□□□ -0.94
HCG18-243ENST00000602498 CLIP1P30622 1438 aa9.16□□□□□ -0.94
HCG18-243ENST00000602498 MLECQ14165 292 aa9.15□□□□□ -0.94
HCG18-243ENST00000602498 MYT1LQ9UL68 1186 aa9.15□□□□□ -0.94
HCG18-243ENST00000602498 AKNAQ7Z591 1439 aa9.14□□□□□ -0.95
HCG18-243ENST00000602498 FANCAO15360 1455 aa9.14□□□□□ -0.95
HCG18-243ENST00000602498 ZNF777Q9ULD5 760 aaPredicted RBP9.13□□□□□ -0.95
HCG18-243ENST00000602498 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.13□□□□□ -0.95
HCG18-243ENST00000602498 ARAP3Q8WWN8 1544 aa9.12□□□□□ -0.95
HCG18-243ENST00000602498 EFCAB2Q5VUJ9 269 aa9.12□□□□□ -0.95
HCG18-243ENST00000602498 NEO1Q92859 1461 aa9.12□□□□□ -0.95
HCG18-243ENST00000602498 SCAPERQ9BY12 1400 aa9.12□□□□□ -0.95
HCG18-243ENST00000602498 PHLDB1Q86UU1 1377 aa9.12□□□□□ -0.95
HCG18-243ENST00000602498 CFAP43Q8NDM7 1665 aa9.11□□□□□ -0.95
HCG18-243ENST00000602498 DENND4BO75064 1496 aaPredicted RBP9.11□□□□□ -0.95
HCG18-243ENST00000602498 AFAP1Q8N556 730 aa9.11□□□□□ -0.95
HCG18-243ENST00000602498 ABCA9Q8IUA7 1624 aa9.11□□□□□ -0.95
HCG18-243ENST00000602498 PLCH2O75038 1416 aa9.11□□□□□ -0.95
HCG18-243ENST00000602498 TROQ12816 1431 aaPredicted RBP9.11□□□□□ -0.95
HCG18-243ENST00000602498 CASKIN1Q8WXD9 1431 aa9.11□□□□□ -0.95
HCG18-243ENST00000602498 YEATS2Q9ULM3 1422 aa9.1□□□□□ -0.95
HCG18-243ENST00000602498 TTC37Q6PGP7 1564 aa9.1□□□□□ -0.95
HCG18-243ENST00000602498 HECW1Q76N89 1606 aa9.09□□□□□ -0.95
HCG18-243ENST00000602498 CEP162Q5TB80 1403 aa9.08□□□□□ -0.96
HCG18-243ENST00000602498 PCF11O94913 1555 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms