RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 NISCHQ9Y2I1 1504 aa13.8□□□□□ -0.2
HCG18-243ENST00000602498 ABCC9O60706 1549 aa12.35□□□□□ -0.43
HCG18-243ENST00000602498 CCDC180Q9P1Z9 1646 aa12.13□□□□□ -0.47
HCG18-243ENST00000602498 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
HCG18-243ENST00000602498 PABPN1Q86U42 306 aaKnown RBP eCLIP11.64□□□□□ -0.55
HCG18-243ENST00000602498 RB1CC1Q8TDY2 1594 aa11.62□□□□□ -0.55
HCG18-243ENST00000602498 NACADO15069 1562 aa11.56□□□□□ -0.56
HCG18-243ENST00000602498 DNAJC5BQ9UF47 199 aa11.56□□□□□ -0.56
HCG18-243ENST00000602498 AEBP2Q6ZN18 517 aaPredicted RBP11.49□□□□□ -0.57
HCG18-243ENST00000602498 ZCCHC6Q5VYS8 1495 aaKnown RBP11.45□□□□□ -0.58
HCG18-243ENST00000602498 MYO15BQ96JP2 1530 aa11.37□□□□□ -0.59
HCG18-243ENST00000602498 DCAF1Q9Y4B6 1507 aa11.3□□□□□ -0.6
HCG18-243ENST00000602498 BICRAQ9NZM4 1560 aa11.29□□□□□ -0.6
HCG18-243ENST00000602498 SCRIBQ14160 1630 aa11.28□□□□□ -0.6
HCG18-243ENST00000602498 UNC13AQ9UPW8 1703 aa11.2□□□□□ -0.62
HCG18-243ENST00000602498 CHIC1Q5VXU3 224 aa11.14□□□□□ -0.63
HCG18-243ENST00000602498 SHROOM4Q9ULL8 1493 aa11.08□□□□□ -0.64
HCG18-243ENST00000602498 CECR2Q9BXF3 1484 aa11.07□□□□□ -0.64
HCG18-243ENST00000602498 EIF4G1Q04637 1599 aaKnown RBP11.03□□□□□ -0.64
HCG18-243ENST00000602498 CC2D2AQ9P2K1 1620 aa11.02□□□□□ -0.64
HCG18-243ENST00000602498 ATAD2BQ9ULI0 1458 aa10.76□□□□□ -0.69
HCG18-243ENST00000602498 NCAPD3P42695 1498 aa10.74□□□□□ -0.69
HCG18-243ENST00000602498 SMARCA4P51532 1647 aa10.69□□□□□ -0.7
HCG18-243ENST00000602498 MROH2BQ7Z745 1585 aa10.69□□□□□ -0.7
HCG18-243ENST00000602498 BAZ1AQ9NRL2 1556 aaPredicted RBP10.67□□□□□ -0.7
HCG18-243ENST00000602498 BAZ1BQ9UIG0 1483 aaKnown RBP10.66□□□□□ -0.7
HCG18-243ENST00000602498 SMARCA2P51531 1590 aa10.65□□□□□ -0.71
HCG18-243ENST00000602498 ERCC6Q03468 1493 aa10.63□□□□□ -0.71
HCG18-243ENST00000602498 NESP48681 1621 aa10.63□□□□□ -0.71
HCG18-243ENST00000602498 HMGXB3Q12766 1538 aa10.59□□□□□ -0.71
HCG18-243ENST00000602498 RSF1Q96T23 1441 aaPredicted RBP10.54□□□□□ -0.72
HCG18-243ENST00000602498 PEG3Q9GZU2 1588 aa10.52□□□□□ -0.72
HCG18-243ENST00000602498 WIZO95785 1651 aa10.5□□□□□ -0.73
HCG18-243ENST00000602498 CADPSQ9ULU8 1353 aa10.49□□□□□ -0.73
HCG18-243ENST00000602498 CUX2O14529 1486 aa10.45□□□□□ -0.74
HCG18-243ENST00000602498 PDS5BQ9NTI5 1447 aa10.44□□□□□ -0.74
HCG18-243ENST00000602498 DNAJC5Q9H3Z4 198 aa10.44□□□□□ -0.74
HCG18-243ENST00000602498 LAMC3Q9Y6N6 1575 aa10.39□□□□□ -0.75
HCG18-243ENST00000602498 TOP2AP11388 1531 aaKnown RBP10.38□□□□□ -0.75
HCG18-243ENST00000602498 FANCD2Q9BXW9 1451 aa10.36□□□□□ -0.75
HCG18-243ENST00000602498 SUPT5HO00267 1087 aaKnown RBP10.35□□□□□ -0.75
HCG18-243ENST00000602498 CCDC88BA6NC98 1476 aa10.34□□□□□ -0.75
HCG18-243ENST00000602498 CFTRP13569 1480 aa10.34□□□□□ -0.75
HCG18-243ENST00000602498 MRC2Q9UBG0 1479 aa10.34□□□□□ -0.75
HCG18-243ENST00000602498 THOC2Q8NI27 1593 aaKnown RBP10.34□□□□□ -0.75
HCG18-243ENST00000602498 CEP164Q9UPV0 1460 aa10.32□□□□□ -0.76
HCG18-243ENST00000602498 KIF21AQ7Z4S6 1674 aa10.3□□□□□ -0.76
HCG18-243ENST00000602498 WDR62O43379 1518 aa10.25□□□□□ -0.77
HCG18-243ENST00000602498 URB2Q14146 1524 aaKnown RBP10.25□□□□□ -0.77
HCG18-243ENST00000602498 TRIM41Q8WV44 630 aa10.18□□□□□ -0.78
HCG18-243ENST00000602498 ZNF608Q9ULD9 1512 aaPredicted RBP10.15□□□□□ -0.78
HCG18-243ENST00000602498 TOPBP1Q92547 1522 aa10.14□□□□□ -0.79
HCG18-243ENST00000602498 OSCARQ8IYS5 282 aa10.13□□□□□ -0.79
HCG18-243ENST00000602498 FBLN2P98095 1184 aa10.12□□□□□ -0.79
HCG18-243ENST00000602498 AQRO60306 1485 aaKnown RBP eCLIP10.1□□□□□ -0.79
HCG18-243ENST00000602498 IFT140Q96RY7 1462 aa10.1□□□□□ -0.79
HCG18-243ENST00000602498 RAD54L2Q9Y4B4 1467 aa10.1□□□□□ -0.79
HCG18-243ENST00000602498 TDRD9Q8NDG6 1382 aaKnown RBP10.1□□□□□ -0.79
HCG18-243ENST00000602498 SOGA1O94964 1423 aa10.07□□□□□ -0.8
HCG18-243ENST00000602498 POLA1P09884 1462 aaPredicted RBP10.06□□□□□ -0.8
HCG18-243ENST00000602498 DNMBPQ6XZF7 1577 aa10.05□□□□□ -0.8
HCG18-243ENST00000602498 ABCC8Q09428 1581 aa10.05□□□□□ -0.8
HCG18-243ENST00000602498 FGD5Q6ZNL6 1462 aa10.03□□□□□ -0.8
HCG18-243ENST00000602498 CUX1P39880 1505 aa10.02□□□□□ -0.81
HCG18-243ENST00000602498 CHMP7Q8WUX9 453 aaPredicted RBP9.99□□□□□ -0.81
HCG18-243ENST00000602498 EIF4G3O43432 1585 aaKnown RBP9.97□□□□□ -0.81
HCG18-243ENST00000602498 CYB5RLQ6IPT4 315 aa9.96□□□□□ -0.82
HCG18-243ENST00000602498 SNAPC4Q5SXM2 1469 aa9.96□□□□□ -0.82
HCG18-243ENST00000602498 TARBP1Q13395 1621 aaKnown RBP9.96□□□□□ -0.82
HCG18-243ENST00000602498 PRDM2Q13029 1718 aa9.95□□□□□ -0.82
HCG18-243ENST00000602498 WRNQ14191 1432 aaPredicted RBP eCLIP9.93□□□□□ -0.82
HCG18-243ENST00000602498 GRIN2BQ13224 1484 aa9.91□□□□□ -0.82
HCG18-243ENST00000602498 GAPVD1Q14C86 1478 aa9.91□□□□□ -0.82
HCG18-243ENST00000602498 ARHGEF11O15085 1522 aa9.89□□□□□ -0.83
HCG18-243ENST00000602498 ABCA10Q8WWZ4 1543 aa9.87□□□□□ -0.83
HCG18-243ENST00000602498 PHF23Q9BUL5 403 aaPredicted RBP9.87□□□□□ -0.83
HCG18-243ENST00000602498 SYNJ1O43426 1573 aa9.86□□□□□ -0.83
HCG18-243ENST00000602498 RIMBP3CA6NJZ7 1639 aa9.85□□□□□ -0.83
HCG18-243ENST00000602498 RIMBP3BA6NNM3 1639 aa9.85□□□□□ -0.83
HCG18-243ENST00000602498 RIMBP3Q9UFD9 1639 aa9.85□□□□□ -0.83
HCG18-243ENST00000602498 SYNJ2O15056 1496 aa9.85□□□□□ -0.83
HCG18-243ENST00000602498 MAGI1Q96QZ7 1491 aaPredicted RBP9.85□□□□□ -0.83
HCG18-243ENST00000602498 TRHP20396 242 aaPredicted RBP9.84□□□□□ -0.83
HCG18-243ENST00000602498 ARAP1Q96P48 1450 aa9.83□□□□□ -0.84
HCG18-243ENST00000602498 CHD1O14646 1710 aa9.81□□□□□ -0.84
HCG18-243ENST00000602498 TOP2BQ02880 1626 aa9.81□□□□□ -0.84
HCG18-243ENST00000602498 FHAD1B1AJZ9 1412 aa9.78□□□□□ -0.84
HCG18-243ENST00000602498 GRIN2AQ12879 1464 aa9.78□□□□□ -0.84
HCG18-243ENST00000602498 ABCA5Q8WWZ7 1642 aa9.78□□□□□ -0.84
HCG18-243ENST00000602498 CLASP1Q7Z460 1538 aa9.77□□□□□ -0.84
HCG18-243ENST00000602498 WDR97A6NE52 1622 aa9.76□□□□□ -0.85
HCG18-243ENST00000602498 TTBK1Q5TCY1 1321 aaPredicted RBP9.76□□□□□ -0.85
HCG18-243ENST00000602498 IGF1RP08069 1367 aa9.75□□□□□ -0.85
HCG18-243ENST00000602498 BIVM-ERCC5R4GMW8 1640 aa9.74□□□□□ -0.85
HCG18-243ENST00000602498 JPH4Q96JJ6 628 aa9.74□□□□□ -0.85
HCG18-243ENST00000602498 NUP160Q12769 1436 aa9.73□□□□□ -0.85
HCG18-243ENST00000602498 ADAMTS12P58397 1594 aa9.73□□□□□ -0.85
HCG18-243ENST00000602498 KIF27Q86VH2 1401 aa9.73□□□□□ -0.85
HCG18-243ENST00000602498 ERCC6L2Q5T890 1561 aa9.72□□□□□ -0.85
HCG18-243ENST00000602498 PBRM1Q86U86 1689 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms