RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 KIAA0586Q9BVV6 1533 aa36.24■■■■□ 3.39
CHMP2A-204ENST00000597848 JPH4Q96JJ6 628 aa36.18■■■■□ 3.38
CHMP2A-204ENST00000597848 UBTFP17480 764 aaKnown RBP36.16■■■■□ 3.38
CHMP2A-204ENST00000597848 GOLGA3Q08378 1498 aa36.16■■■■□ 3.38
CHMP2A-204ENST00000597848 IQGAP2Q13576 1575 aa36.08■■■■□ 3.37
CHMP2A-204ENST00000597848 CTTNBP2Q8WZ74 1663 aa36.04■■■■□ 3.36
CHMP2A-204ENST00000597848 PRG4Q92954 1404 aaPredicted RBP36.03■■■■□ 3.36
CHMP2A-204ENST00000597848 SHROOM2Q13796 1616 aa36.03■■■■□ 3.36
CHMP2A-204ENST00000597848 ARHGEF11O15085 1522 aa36.03■■■■□ 3.36
CHMP2A-204ENST00000597848 RANGAP1P46060 587 aaPredicted RBP35.96■■■■□ 3.35
CHMP2A-204ENST00000597848 RIMBP3CA6NJZ7 1639 aa35.95■■■■□ 3.35
CHMP2A-204ENST00000597848 RIMBP3BA6NNM3 1639 aa35.95■■■■□ 3.35
CHMP2A-204ENST00000597848 RIMBP3Q9UFD9 1639 aa35.95■■■■□ 3.35
CHMP2A-204ENST00000597848 ERCC6L2Q5T890 1561 aa35.92■■■■□ 3.34
CHMP2A-204ENST00000597848 LOC105371045A0A1W2PR82 267 aa35.91■■■■□ 3.34
CHMP2A-204ENST00000597848 UGGT2Q9NYU1 1516 aa35.89■■■■□ 3.34
CHMP2A-204ENST00000597848 CARMIL2Q6F5E8 1435 aa35.89■■■■□ 3.34
CHMP2A-204ENST00000597848 TNIKQ9UKE5 1360 aa35.81■■■■□ 3.32
CHMP2A-204ENST00000597848 CYB5RLQ6IPT4 315 aa35.81■■■■□ 3.32
CHMP2A-204ENST00000597848 DISP1Q96F81 1524 aa35.8■■■■□ 3.32
CHMP2A-204ENST00000597848 TTBK1Q5TCY1 1321 aaPredicted RBP35.79■■■■□ 3.32
CHMP2A-204ENST00000597848 ARAP1Q96P48 1450 aa35.78■■■■□ 3.32
CHMP2A-204ENST00000597848 P3H3Q8IVL6 736 aa35.77■■■■□ 3.32
CHMP2A-204ENST00000597848 KIAA0556O60303 1618 aa35.72■■■■□ 3.31
CHMP2A-204ENST00000597848 PTPRGP23470 1445 aa35.69■■■■□ 3.3
CHMP2A-204ENST00000597848 SAMD9Q5K651 1589 aa35.63■■■■□ 3.29
CHMP2A-204ENST00000597848 EFCAB5A4FU69 1503 aa35.61■■■■□ 3.29
CHMP2A-204ENST00000597848 CLIP1P30622 1438 aa35.56■■■■□ 3.28
CHMP2A-204ENST00000597848 FHOD3Q2V2M9 1422 aa35.56■■■■□ 3.28
CHMP2A-204ENST00000597848 ARHGAP35Q9NRY4 1499 aa35.54■■■■□ 3.28
CHMP2A-204ENST00000597848 CEP162Q5TB80 1403 aa35.5■■■■□ 3.27
CHMP2A-204ENST00000597848 UACAQ9BZF9 1416 aa35.43■■■■□ 3.26
CHMP2A-204ENST00000597848 PLB1Q6P1J6 1458 aa35.38■■■■□ 3.25
CHMP2A-204ENST00000597848 NPM1P06748 294 aaKnown RBP eCLIP35.35■■■■□ 3.25
CHMP2A-204ENST00000597848 FMN1Q68DA7 1419 aa35.33■■■■□ 3.25
CHMP2A-204ENST00000597848 ADCY10Q96PN6 1610 aa35.32■■■■□ 3.24
CHMP2A-204ENST00000597848 UHRF1BP1LA0JNW5 1464 aa35.31■■■■□ 3.24
CHMP2A-204ENST00000597848 ABCC2Q92887 1545 aa35.31■■■■□ 3.24
CHMP2A-204ENST00000597848 ABCA8O94911 1581 aa35.3■■■■□ 3.24
CHMP2A-204ENST00000597848 ATP1B4Q9UN42 357 aaPredicted RBP35.27■■■■□ 3.24
CHMP2A-204ENST00000597848 ARID3CA6NKF2 412 aa35.24■■■■□ 3.23
CHMP2A-204ENST00000597848 RAPGEF6Q8TEU7 1601 aa35.23■■■■□ 3.23
CHMP2A-204ENST00000597848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.14■■■■□ 3.22
CHMP2A-204ENST00000597848 HNRNPUL2Q1KMD3 747 aaKnown RBP35.14■■■■□ 3.22
CHMP2A-204ENST00000597848 KDM5BQ9UGL1 1544 aa35.14■■■■□ 3.22
CHMP2A-204ENST00000597848 NUP153P49790 1475 aaKnown RBP35.12■■■■□ 3.21
CHMP2A-204ENST00000597848 CASKIN1Q8WXD9 1431 aa35.1■■■■□ 3.21
CHMP2A-204ENST00000597848 ATP10BO94823 1461 aa35.08■■■■□ 3.21
CHMP2A-204ENST00000597848 ZCCHC11Q5TAX3 1644 aaKnown RBP35.06■■■■□ 3.2
CHMP2A-204ENST00000597848 PCF11O94913 1555 aaKnown RBP35.05■■■■□ 3.2
CHMP2A-204ENST00000597848 HECW1Q76N89 1606 aa35.05■■■■□ 3.2
CHMP2A-204ENST00000597848 VPS8Q8N3P4 1428 aa35.02■■■■□ 3.2
CHMP2A-204ENST00000597848 FYCO1Q9BQS8 1478 aa35.01■■■■□ 3.19
CHMP2A-204ENST00000597848 ASXL2Q76L83 1435 aa34.99■■■■□ 3.19
CHMP2A-204ENST00000597848 MAPKBP1O60336 1514 aa34.99■■■■□ 3.19
CHMP2A-204ENST00000597848 EPRSP07814 1512 aaKnown RBP34.98■■■■□ 3.19
CHMP2A-204ENST00000597848 TRHP20396 242 aaPredicted RBP34.95■■■■□ 3.19
CHMP2A-204ENST00000597848 CDK13Q14004 1512 aaKnown RBP34.95■■■■□ 3.19
CHMP2A-204ENST00000597848 PLEKHD1A6NEE1 506 aa34.92■■■■□ 3.18
CHMP2A-204ENST00000597848 CDK11AQ9UQ88 783 aaPredicted RBP34.9■■■■□ 3.18
CHMP2A-204ENST00000597848 KCNH8Q96L42 1107 aa34.89■■■■□ 3.18
CHMP2A-204ENST00000597848 CCDC18Q5T9S5 1454 aa34.89■■■■□ 3.18
CHMP2A-204ENST00000597848 WDR7Q9Y4E6 1490 aa34.87■■■■□ 3.17
CHMP2A-204ENST00000597848 FAM69CQ0P6D2 419 aa34.84■■■■□ 3.17
CHMP2A-204ENST00000597848 LRRIQ1Q96JM4 1722 aa34.82■■■■□ 3.16
CHMP2A-204ENST00000597848 ABCC10Q5T3U5 1492 aa34.81■■■■□ 3.16
CHMP2A-204ENST00000597848 APLP2Q06481 763 aa34.79■■■■□ 3.16
CHMP2A-204ENST00000597848 DIP2BQ9P265 1576 aa34.72■■■■□ 3.15
CHMP2A-204ENST00000597848 TROQ12816 1431 aaPredicted RBP34.69■■■■□ 3.14
CHMP2A-204ENST00000597848 MTUS2Q5JR59 1369 aa34.66■■■■□ 3.14
CHMP2A-204ENST00000597848 TIAM1Q13009 1591 aa34.64■■■■□ 3.14
CHMP2A-204ENST00000597848 GLI2P10070 1586 aa34.63■■■■□ 3.13
CHMP2A-204ENST00000597848 KIF13AQ9H1H9 1805 aa34.63■■■■□ 3.13
CHMP2A-204ENST00000597848 MAGI3Q5TCQ9 1506 aa34.63■■■■□ 3.13
CHMP2A-204ENST00000597848 MAP3K1Q13233 1512 aa34.6■■■■□ 3.13
CHMP2A-204ENST00000597848 CFAP43Q8NDM7 1665 aa34.6■■■■□ 3.13
CHMP2A-204ENST00000597848 KANK4Q5T7N3 995 aaPredicted RBP34.56■■■■□ 3.12
CHMP2A-204ENST00000597848 CD109Q6YHK3 1445 aa34.55■■■■□ 3.12
CHMP2A-204ENST00000597848 KIF14Q15058 1648 aa34.53■■■■□ 3.12
CHMP2A-204ENST00000597848 LRRC9Q6ZRR7 1453 aa34.52■■■■□ 3.12
CHMP2A-204ENST00000597848 EHBP1L1Q8N3D4 1523 aa34.51■■■■□ 3.12
CHMP2A-204ENST00000597848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.5■■■■□ 3.11
CHMP2A-204ENST00000597848 ABCA9Q8IUA7 1624 aa34.5■■■■□ 3.11
CHMP2A-204ENST00000597848 MAP3K4Q9Y6R4 1608 aa34.48■■■■□ 3.11
CHMP2A-204ENST00000597848 TSPOAP1O95153 1857 aa34.45■■■■□ 3.11
CHMP2A-204ENST00000597848 TTC37Q6PGP7 1564 aa34.45■■■■□ 3.1
CHMP2A-204ENST00000597848 PPARGC1BQ86YN6 1023 aaKnown RBP34.38■■■■□ 3.09
CHMP2A-204ENST00000597848 CCNB3Q8WWL7 1395 aa34.37■■■■□ 3.09
CHMP2A-204ENST00000597848 NCOA2Q15596 1464 aa34.36■■■■□ 3.09
CHMP2A-204ENST00000597848 TEX14Q8IWB6 1497 aa34.36■■■■□ 3.09
CHMP2A-204ENST00000597848 PLCH2O75038 1416 aa34.36■■■■□ 3.09
CHMP2A-204ENST00000597848 SUPT6HQ7KZ85 1726 aaKnown RBP34.35■■■■□ 3.09
CHMP2A-204ENST00000597848 PPRC1Q5VV67 1664 aaKnown RBP34.32■■■■□ 3.08
CHMP2A-204ENST00000597848 EFCAB2Q5VUJ9 269 aa34.3■■■■□ 3.08
CHMP2A-204ENST00000597848 MYO5CQ9NQX4 1742 aa34.29■■■■□ 3.08
CHMP2A-204ENST00000597848 GPATCH8Q9UKJ3 1502 aaKnown RBP34.28■■■■□ 3.08
CHMP2A-204ENST00000597848 ARHGAP5Q13017 1502 aa34.26■■■■□ 3.08
CHMP2A-204ENST00000597848 CFDP1Q9UEE9 299 aaPredicted RBP34.26■■■■□ 3.08
CHMP2A-204ENST00000597848 FANCAO15360 1455 aa34.26■■■■□ 3.07
CHMP2A-204ENST00000597848 ZNF777Q9ULD5 760 aaPredicted RBP34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms