RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 RIMBP3CA6NJZ7 1639 aa31.91■■■□□ 2.7
PNKP-207ENST00000596014 RIMBP3BA6NNM3 1639 aa31.91■■■□□ 2.7
PNKP-207ENST00000596014 RIMBP3Q9UFD9 1639 aa31.91■■■□□ 2.7
PNKP-207ENST00000596014 SHROOM2Q13796 1616 aa31.9■■■□□ 2.7
PNKP-207ENST00000596014 JPH4Q96JJ6 628 aa31.9■■■□□ 2.7
PNKP-207ENST00000596014 KIF21BO75037 1637 aa31.87■■■□□ 2.69
PNKP-207ENST00000596014 IQGAP2Q13576 1575 aa31.83■■■□□ 2.69
PNKP-207ENST00000596014 CTTNBP2Q8WZ74 1663 aa31.82■■■□□ 2.68
PNKP-207ENST00000596014 PRG4Q92954 1404 aaPredicted RBP31.79■■■□□ 2.68
PNKP-207ENST00000596014 ERCC6L2Q5T890 1561 aa31.78■■■□□ 2.68
PNKP-207ENST00000596014 EHMT2Q96KQ7 1210 aa31.73■■■□□ 2.67
PNKP-207ENST00000596014 GOLGA3Q08378 1498 aa31.71■■■□□ 2.67
PNKP-207ENST00000596014 ARAP1Q96P48 1450 aa31.7■■■□□ 2.67
PNKP-207ENST00000596014 UGGT2Q9NYU1 1516 aa31.67■■■□□ 2.66
PNKP-207ENST00000596014 CYB5RLQ6IPT4 315 aa31.67■■■□□ 2.66
PNKP-207ENST00000596014 UBTFP17480 764 aaKnown RBP31.64■■■□□ 2.66
PNKP-207ENST00000596014 CARMIL2Q6F5E8 1435 aa31.61■■■□□ 2.65
PNKP-207ENST00000596014 DISP1Q96F81 1524 aa31.59■■■□□ 2.65
PNKP-207ENST00000596014 KIAA0556O60303 1618 aa31.52■■■□□ 2.64
PNKP-207ENST00000596014 TNIKQ9UKE5 1360 aa31.49■■■□□ 2.63
PNKP-207ENST00000596014 RANGAP1P46060 587 aaPredicted RBP31.48■■■□□ 2.63
PNKP-207ENST00000596014 PTPRGP23470 1445 aa31.45■■■□□ 2.63
PNKP-207ENST00000596014 TTBK1Q5TCY1 1321 aaPredicted RBP31.43■■■□□ 2.62
PNKP-207ENST00000596014 SAMD9Q5K651 1589 aa31.42■■■□□ 2.62
PNKP-207ENST00000596014 P3H3Q8IVL6 736 aa31.39■■■□□ 2.62
PNKP-207ENST00000596014 LOC105371045A0A1W2PR82 267 aa31.36■■■□□ 2.61
PNKP-207ENST00000596014 EFCAB5A4FU69 1503 aa31.34■■■□□ 2.61
PNKP-207ENST00000596014 FHOD3Q2V2M9 1422 aa31.25■■■□□ 2.59
PNKP-207ENST00000596014 ADCY10Q96PN6 1610 aa31.25■■■□□ 2.59
PNKP-207ENST00000596014 ARHGAP35Q9NRY4 1499 aa31.25■■■□□ 2.59
PNKP-207ENST00000596014 UACAQ9BZF9 1416 aa31.25■■■□□ 2.59
PNKP-207ENST00000596014 PLB1Q6P1J6 1458 aa31.19■■■□□ 2.58
PNKP-207ENST00000596014 UHRF1BP1LA0JNW5 1464 aa31.19■■■□□ 2.58
PNKP-207ENST00000596014 ABCC2Q92887 1545 aa31.17■■■□□ 2.58
PNKP-207ENST00000596014 ABCA8O94911 1581 aa31.16■■■□□ 2.58
PNKP-207ENST00000596014 CLIP1P30622 1438 aa31.16■■■□□ 2.58
PNKP-207ENST00000596014 NPM1P06748 294 aaKnown RBP eCLIP31.14■■■□□ 2.58
PNKP-207ENST00000596014 CEP162Q5TB80 1403 aa31.1■■■□□ 2.57
PNKP-207ENST00000596014 RAPGEF6Q8TEU7 1601 aa31.06■■■□□ 2.56
PNKP-207ENST00000596014 FMN1Q68DA7 1419 aa31.05■■■□□ 2.56
PNKP-207ENST00000596014 KDM5BQ9UGL1 1544 aa31.04■■■□□ 2.56
PNKP-207ENST00000596014 ZCCHC11Q5TAX3 1644 aaKnown RBP30.99■■■□□ 2.55
PNKP-207ENST00000596014 MAPKBP1O60336 1514 aa30.98■■■□□ 2.55
PNKP-207ENST00000596014 NUP153P49790 1475 aaKnown RBP30.95■■■□□ 2.55
PNKP-207ENST00000596014 ARID3CA6NKF2 412 aa30.94■■■□□ 2.54
PNKP-207ENST00000596014 ATP10BO94823 1461 aa30.93■■■□□ 2.54
PNKP-207ENST00000596014 TRHP20396 242 aaPredicted RBP30.9■■■□□ 2.54
PNKP-207ENST00000596014 ASXL2Q76L83 1435 aa30.89■■■□□ 2.54
PNKP-207ENST00000596014 ATP1B4Q9UN42 357 aaPredicted RBP30.88■■■□□ 2.53
PNKP-207ENST00000596014 HECW1Q76N89 1606 aa30.85■■■□□ 2.53
PNKP-207ENST00000596014 CASKIN1Q8WXD9 1431 aa30.85■■■□□ 2.53
PNKP-207ENST00000596014 PCF11O94913 1555 aaKnown RBP30.83■■■□□ 2.53
PNKP-207ENST00000596014 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.83■■■□□ 2.53
PNKP-207ENST00000596014 HNRNPUL2Q1KMD3 747 aaKnown RBP30.83■■■□□ 2.53
PNKP-207ENST00000596014 ABCC10Q5T3U5 1492 aa30.81■■■□□ 2.52
PNKP-207ENST00000596014 EPRSP07814 1512 aaKnown RBP30.79■■■□□ 2.52
PNKP-207ENST00000596014 KIF13AQ9H1H9 1805 aa30.79■■■□□ 2.52
PNKP-207ENST00000596014 FYCO1Q9BQS8 1478 aa30.78■■■□□ 2.52
PNKP-207ENST00000596014 WDR7Q9Y4E6 1490 aa30.78■■■□□ 2.52
PNKP-207ENST00000596014 CDK13Q14004 1512 aaKnown RBP30.77■■■□□ 2.52
PNKP-207ENST00000596014 DIP2BQ9P265 1576 aa30.77■■■□□ 2.52
PNKP-207ENST00000596014 FAM69CQ0P6D2 419 aa30.76■■■□□ 2.51
PNKP-207ENST00000596014 LRRIQ1Q96JM4 1722 aa30.76■■■□□ 2.51
PNKP-207ENST00000596014 VPS8Q8N3P4 1428 aa30.7■■■□□ 2.51
PNKP-207ENST00000596014 PLEKHD1A6NEE1 506 aa30.7■■■□□ 2.5
PNKP-207ENST00000596014 KCNH8Q96L42 1107 aa30.7■■■□□ 2.5
PNKP-207ENST00000596014 CCDC18Q5T9S5 1454 aa30.67■■■□□ 2.5
PNKP-207ENST00000596014 GLI2P10070 1586 aa30.66■■■□□ 2.5
PNKP-207ENST00000596014 CDK11AQ9UQ88 783 aaPredicted RBP30.64■■■□□ 2.5
PNKP-207ENST00000596014 TSPOAP1O95153 1857 aa30.55■■■□□ 2.48
PNKP-207ENST00000596014 MAP3K4Q9Y6R4 1608 aa30.54■■■□□ 2.48
PNKP-207ENST00000596014 TROQ12816 1431 aaPredicted RBP30.53■■■□□ 2.48
PNKP-207ENST00000596014 CFAP43Q8NDM7 1665 aa30.51■■■□□ 2.47
PNKP-207ENST00000596014 MAGI3Q5TCQ9 1506 aa30.5■■■□□ 2.47
PNKP-207ENST00000596014 ABCA9Q8IUA7 1624 aa30.5■■■□□ 2.47
PNKP-207ENST00000596014 CD109Q6YHK3 1445 aa30.48■■■□□ 2.47
PNKP-207ENST00000596014 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.45■■■□□ 2.47
PNKP-207ENST00000596014 PPRC1Q5VV67 1664 aaKnown RBP30.45■■■□□ 2.46
PNKP-207ENST00000596014 KIF14Q15058 1648 aa30.44■■■□□ 2.46
PNKP-207ENST00000596014 TIAM1Q13009 1591 aa30.43■■■□□ 2.46
PNKP-207ENST00000596014 MTUS2Q5JR59 1369 aa30.41■■■□□ 2.46
PNKP-207ENST00000596014 TTC37Q6PGP7 1564 aa30.4■■■□□ 2.46
PNKP-207ENST00000596014 MAP3K1Q13233 1512 aa30.39■■■□□ 2.46
PNKP-207ENST00000596014 APLP2Q06481 763 aa30.36■■■□□ 2.45
PNKP-207ENST00000596014 TEX14Q8IWB6 1497 aa30.36■■■□□ 2.45
PNKP-207ENST00000596014 EHBP1L1Q8N3D4 1523 aa30.34■■■□□ 2.45
PNKP-207ENST00000596014 LRRC9Q6ZRR7 1453 aa30.31■■■□□ 2.44
PNKP-207ENST00000596014 KANK4Q5T7N3 995 aaPredicted RBP30.3■■■□□ 2.44
PNKP-207ENST00000596014 MYO5CQ9NQX4 1742 aa30.29■■■□□ 2.44
PNKP-207ENST00000596014 PLCH2O75038 1416 aa30.28■■■□□ 2.44
PNKP-207ENST00000596014 SUPT6HQ7KZ85 1726 aaKnown RBP30.22■■■□□ 2.43
PNKP-207ENST00000596014 ARAP3Q8WWN8 1544 aa30.21■■■□□ 2.43
PNKP-207ENST00000596014 FANCAO15360 1455 aa30.21■■■□□ 2.43
PNKP-207ENST00000596014 NEO1Q92859 1461 aa30.21■■■□□ 2.43
PNKP-207ENST00000596014 CDC42BPAQ5VT25 1732 aa30.21■■■□□ 2.43
PNKP-207ENST00000596014 CDC42BPBQ9Y5S2 1711 aa30.2■■■□□ 2.42
PNKP-207ENST00000596014 KDM6BO15054 1643 aa30.19■■■□□ 2.42
PNKP-207ENST00000596014 PHLDB1Q86UU1 1377 aa30.19■■■□□ 2.42
PNKP-207ENST00000596014 NCOA2Q15596 1464 aa30.18■■■□□ 2.42
PNKP-207ENST00000596014 PREX2Q70Z35 1606 aa30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms