RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 EHMT2Q96KQ7 1210 aa24.53■■□□□ 1.52
DDX49-204ENST00000595858 JPH4Q96JJ6 628 aa24.53■■□□□ 1.52
DDX49-204ENST00000595858 GOLGA3Q08378 1498 aa24.49■■□□□ 1.51
DDX49-204ENST00000595858 UBTFP17480 764 aaKnown RBP24.46■■□□□ 1.51
DDX49-204ENST00000595858 IQGAP2Q13576 1575 aa24.45■■□□□ 1.5
DDX49-204ENST00000595858 SHROOM2Q13796 1616 aa24.44■■□□□ 1.5
DDX49-204ENST00000595858 CTTNBP2Q8WZ74 1663 aa24.43■■□□□ 1.5
DDX49-204ENST00000595858 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
DDX49-204ENST00000595858 PRG4Q92954 1404 aaPredicted RBP24.41■■□□□ 1.5
DDX49-204ENST00000595858 RIMBP3CA6NJZ7 1639 aa24.37■■□□□ 1.49
DDX49-204ENST00000595858 RIMBP3BA6NNM3 1639 aa24.37■■□□□ 1.49
DDX49-204ENST00000595858 RIMBP3Q9UFD9 1639 aa24.37■■□□□ 1.49
DDX49-204ENST00000595858 ERCC6L2Q5T890 1561 aa24.35■■□□□ 1.49
DDX49-204ENST00000595858 UGGT2Q9NYU1 1516 aa24.35■■□□□ 1.49
DDX49-204ENST00000595858 LOC105371045A0A1W2PR82 267 aa24.33■■□□□ 1.49
DDX49-204ENST00000595858 CARMIL2Q6F5E8 1435 aa24.3■■□□□ 1.48
DDX49-204ENST00000595858 RANGAP1P46060 587 aaPredicted RBP24.29■■□□□ 1.48
DDX49-204ENST00000595858 DISP1Q96F81 1524 aa24.29■■□□□ 1.48
DDX49-204ENST00000595858 TNIKQ9UKE5 1360 aa24.28■■□□□ 1.48
DDX49-204ENST00000595858 ARAP1Q96P48 1450 aa24.26■■□□□ 1.47
DDX49-204ENST00000595858 CYB5RLQ6IPT4 315 aa24.25■■□□□ 1.47
DDX49-204ENST00000595858 KIAA0556O60303 1618 aa24.21■■□□□ 1.47
DDX49-204ENST00000595858 P3H3Q8IVL6 736 aa24.2■■□□□ 1.46
DDX49-204ENST00000595858 PTPRGP23470 1445 aa24.17■■□□□ 1.46
DDX49-204ENST00000595858 TTBK1Q5TCY1 1321 aaPredicted RBP24.17■■□□□ 1.46
DDX49-204ENST00000595858 SAMD9Q5K651 1589 aa24.17■■□□□ 1.46
DDX49-204ENST00000595858 EFCAB5A4FU69 1503 aa24.13■■□□□ 1.45
DDX49-204ENST00000595858 ARHGAP35Q9NRY4 1499 aa24.1■■□□□ 1.45
DDX49-204ENST00000595858 FHOD3Q2V2M9 1422 aa24.09■■□□□ 1.45
DDX49-204ENST00000595858 CLIP1P30622 1438 aa24.08■■□□□ 1.44
DDX49-204ENST00000595858 CEP162Q5TB80 1403 aa24.06■■□□□ 1.44
DDX49-204ENST00000595858 UACAQ9BZF9 1416 aa24.01■■□□□ 1.43
DDX49-204ENST00000595858 PLB1Q6P1J6 1458 aa23.98■■□□□ 1.43
DDX49-204ENST00000595858 UHRF1BP1LA0JNW5 1464 aa23.95■■□□□ 1.42
DDX49-204ENST00000595858 ADCY10Q96PN6 1610 aa23.95■■□□□ 1.42
DDX49-204ENST00000595858 ABCA8O94911 1581 aa23.94■■□□□ 1.42
DDX49-204ENST00000595858 FMN1Q68DA7 1419 aa23.94■■□□□ 1.42
DDX49-204ENST00000595858 ABCC2Q92887 1545 aa23.92■■□□□ 1.42
DDX49-204ENST00000595858 NPM1P06748 294 aaKnown RBP eCLIP23.9■■□□□ 1.42
DDX49-204ENST00000595858 RAPGEF6Q8TEU7 1601 aa23.87■■□□□ 1.41
DDX49-204ENST00000595858 KDM5BQ9UGL1 1544 aa23.84■■□□□ 1.41
DDX49-204ENST00000595858 ARID3CA6NKF2 412 aa23.82■■□□□ 1.4
DDX49-204ENST00000595858 ATP1B4Q9UN42 357 aaPredicted RBP23.82■■□□□ 1.4
DDX49-204ENST00000595858 NUP153P49790 1475 aaKnown RBP23.82■■□□□ 1.4
DDX49-204ENST00000595858 CASKIN1Q8WXD9 1431 aa23.79■■□□□ 1.4
DDX49-204ENST00000595858 ATP10BO94823 1461 aa23.78■■□□□ 1.4
DDX49-204ENST00000595858 ZCCHC11Q5TAX3 1644 aaKnown RBP23.75■■□□□ 1.39
DDX49-204ENST00000595858 PCF11O94913 1555 aaKnown RBP23.75■■□□□ 1.39
DDX49-204ENST00000595858 VPS8Q8N3P4 1428 aa23.74■■□□□ 1.39
DDX49-204ENST00000595858 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.74■■□□□ 1.39
DDX49-204ENST00000595858 HNRNPUL2Q1KMD3 747 aaKnown RBP23.74■■□□□ 1.39
DDX49-204ENST00000595858 HECW1Q76N89 1606 aa23.74■■□□□ 1.39
DDX49-204ENST00000595858 MAPKBP1O60336 1514 aa23.73■■□□□ 1.39
DDX49-204ENST00000595858 FYCO1Q9BQS8 1478 aa23.73■■□□□ 1.39
DDX49-204ENST00000595858 ASXL2Q76L83 1435 aa23.71■■□□□ 1.39
DDX49-204ENST00000595858 EPRSP07814 1512 aaKnown RBP23.71■■□□□ 1.39
DDX49-204ENST00000595858 CDK13Q14004 1512 aaKnown RBP23.68■■□□□ 1.38
DDX49-204ENST00000595858 PLEKHD1A6NEE1 506 aa23.64■■□□□ 1.38
DDX49-204ENST00000595858 CCDC18Q5T9S5 1454 aa23.64■■□□□ 1.37
DDX49-204ENST00000595858 LRRIQ1Q96JM4 1722 aa23.63■■□□□ 1.37
DDX49-204ENST00000595858 WDR7Q9Y4E6 1490 aa23.63■■□□□ 1.37
DDX49-204ENST00000595858 TRHP20396 242 aaPredicted RBP23.62■■□□□ 1.37
DDX49-204ENST00000595858 CDK11AQ9UQ88 783 aaPredicted RBP23.62■■□□□ 1.37
DDX49-204ENST00000595858 ABCC10Q5T3U5 1492 aa23.6■■□□□ 1.37
DDX49-204ENST00000595858 KCNH8Q96L42 1107 aa23.6■■□□□ 1.37
DDX49-204ENST00000595858 FAM69CQ0P6D2 419 aa23.58■■□□□ 1.37
DDX49-204ENST00000595858 DIP2BQ9P265 1576 aa23.54■■□□□ 1.36
DDX49-204ENST00000595858 TROQ12816 1431 aaPredicted RBP23.51■■□□□ 1.35
DDX49-204ENST00000595858 APLP2Q06481 763 aa23.5■■□□□ 1.35
DDX49-204ENST00000595858 KIF13AQ9H1H9 1805 aa23.49■■□□□ 1.35
DDX49-204ENST00000595858 MAGI3Q5TCQ9 1506 aa23.49■■□□□ 1.35
DDX49-204ENST00000595858 GLI2P10070 1586 aa23.49■■□□□ 1.35
DDX49-204ENST00000595858 MAP3K1Q13233 1512 aa23.47■■□□□ 1.35
DDX49-204ENST00000595858 TIAM1Q13009 1591 aa23.47■■□□□ 1.35
DDX49-204ENST00000595858 MTUS2Q5JR59 1369 aa23.47■■□□□ 1.35
DDX49-204ENST00000595858 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
DDX49-204ENST00000595858 KANK4Q5T7N3 995 aaPredicted RBP23.43■■□□□ 1.34
DDX49-204ENST00000595858 ABCA9Q8IUA7 1624 aa23.4■■□□□ 1.34
DDX49-204ENST00000595858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.4■■□□□ 1.34
DDX49-204ENST00000595858 LRRC9Q6ZRR7 1453 aa23.4■■□□□ 1.34
DDX49-204ENST00000595858 CD109Q6YHK3 1445 aa23.4■■□□□ 1.34
DDX49-204ENST00000595858 KIF14Q15058 1648 aa23.39■■□□□ 1.33
DDX49-204ENST00000595858 EHBP1L1Q8N3D4 1523 aa23.38■■□□□ 1.33
DDX49-204ENST00000595858 MAP3K4Q9Y6R4 1608 aa23.38■■□□□ 1.33
DDX49-204ENST00000595858 TTC37Q6PGP7 1564 aa23.35■■□□□ 1.33
DDX49-204ENST00000595858 TSPOAP1O95153 1857 aa23.33■■□□□ 1.33
DDX49-204ENST00000595858 PLCH2O75038 1416 aa23.29■■□□□ 1.32
DDX49-204ENST00000595858 PPRC1Q5VV67 1664 aaKnown RBP23.29■■□□□ 1.32
DDX49-204ENST00000595858 NCOA2Q15596 1464 aa23.28■■□□□ 1.32
DDX49-204ENST00000595858 TEX14Q8IWB6 1497 aa23.27■■□□□ 1.32
DDX49-204ENST00000595858 SUPT6HQ7KZ85 1726 aaKnown RBP23.27■■□□□ 1.32
DDX49-204ENST00000595858 CCNB3Q8WWL7 1395 aa23.26■■□□□ 1.31
DDX49-204ENST00000595858 PPARGC1BQ86YN6 1023 aaKnown RBP23.24■■□□□ 1.31
DDX49-204ENST00000595858 GPATCH8Q9UKJ3 1502 aaKnown RBP23.24■■□□□ 1.31
DDX49-204ENST00000595858 MYO5CQ9NQX4 1742 aa23.23■■□□□ 1.31
DDX49-204ENST00000595858 EFCAB2Q5VUJ9 269 aa23.23■■□□□ 1.31
DDX49-204ENST00000595858 ARAP3Q8WWN8 1544 aa23.21■■□□□ 1.31
DDX49-204ENST00000595858 FANCAO15360 1455 aa23.21■■□□□ 1.31
DDX49-204ENST00000595858 CDC42BPAQ5VT25 1732 aa23.2■■□□□ 1.3
DDX49-204ENST00000595858 CFDP1Q9UEE9 299 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms