RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 EHMT2Q96KQ7 1210 aa37■■■■□ 3.51
SNRNP70-204ENST00000595231 GOLGA3Q08378 1498 aa37■■■■□ 3.51
SNRNP70-204ENST00000595231 CTTNBP2Q8WZ74 1663 aa36.94■■■■□ 3.5
SNRNP70-204ENST00000595231 JPH4Q96JJ6 628 aa36.93■■■■□ 3.5
SNRNP70-204ENST00000595231 IQGAP2Q13576 1575 aa36.91■■■■□ 3.5
SNRNP70-204ENST00000595231 SHROOM2Q13796 1616 aa36.91■■■■□ 3.5
SNRNP70-204ENST00000595231 UBTFP17480 764 aaKnown RBP36.87■■■■□ 3.49
SNRNP70-204ENST00000595231 ARHGEF11O15085 1522 aa36.78■■■■□ 3.48
SNRNP70-204ENST00000595231 PRG4Q92954 1404 aaPredicted RBP36.77■■■■□ 3.48
SNRNP70-204ENST00000595231 LOC105371045A0A1W2PR82 267 aa36.76■■■■□ 3.47
SNRNP70-204ENST00000595231 UGGT2Q9NYU1 1516 aa36.75■■■■□ 3.47
SNRNP70-204ENST00000595231 ERCC6L2Q5T890 1561 aa36.74■■■■□ 3.47
SNRNP70-204ENST00000595231 RIMBP3CA6NJZ7 1639 aa36.71■■■■□ 3.47
SNRNP70-204ENST00000595231 RIMBP3BA6NNM3 1639 aa36.71■■■■□ 3.47
SNRNP70-204ENST00000595231 RIMBP3Q9UFD9 1639 aa36.71■■■■□ 3.47
SNRNP70-204ENST00000595231 TNIKQ9UKE5 1360 aa36.67■■■■□ 3.46
SNRNP70-204ENST00000595231 DISP1Q96F81 1524 aa36.66■■■■□ 3.46
SNRNP70-204ENST00000595231 CARMIL2Q6F5E8 1435 aa36.6■■■■□ 3.45
SNRNP70-204ENST00000595231 RANGAP1P46060 587 aaPredicted RBP36.6■■■■□ 3.45
SNRNP70-204ENST00000595231 KIAA0556O60303 1618 aa36.56■■■■□ 3.44
SNRNP70-204ENST00000595231 ARAP1Q96P48 1450 aa36.54■■■■□ 3.44
SNRNP70-204ENST00000595231 SAMD9Q5K651 1589 aa36.53■■■■□ 3.44
SNRNP70-204ENST00000595231 P3H3Q8IVL6 736 aa36.46■■■■□ 3.43
SNRNP70-204ENST00000595231 EFCAB5A4FU69 1503 aa36.45■■■■□ 3.43
SNRNP70-204ENST00000595231 CYB5RLQ6IPT4 315 aa36.44■■■■□ 3.42
SNRNP70-204ENST00000595231 ARHGAP35Q9NRY4 1499 aa36.42■■■■□ 3.42
SNRNP70-204ENST00000595231 PTPRGP23470 1445 aa36.4■■■■□ 3.42
SNRNP70-204ENST00000595231 CLIP1P30622 1438 aa36.36■■■■□ 3.41
SNRNP70-204ENST00000595231 TTBK1Q5TCY1 1321 aaPredicted RBP36.36■■■■□ 3.41
SNRNP70-204ENST00000595231 FHOD3Q2V2M9 1422 aa36.35■■■■□ 3.41
SNRNP70-204ENST00000595231 CEP162Q5TB80 1403 aa36.35■■■■□ 3.41
SNRNP70-204ENST00000595231 PLB1Q6P1J6 1458 aa36.18■■■■□ 3.38
SNRNP70-204ENST00000595231 UACAQ9BZF9 1416 aa36.18■■■■□ 3.38
SNRNP70-204ENST00000595231 ABCA8O94911 1581 aa36.14■■■■□ 3.38
SNRNP70-204ENST00000595231 ADCY10Q96PN6 1610 aa36.14■■■■□ 3.38
SNRNP70-204ENST00000595231 FMN1Q68DA7 1419 aa36.12■■■■□ 3.37
SNRNP70-204ENST00000595231 UHRF1BP1LA0JNW5 1464 aa36.12■■■■□ 3.37
SNRNP70-204ENST00000595231 ABCC2Q92887 1545 aa36.09■■■■□ 3.37
SNRNP70-204ENST00000595231 RAPGEF6Q8TEU7 1601 aa36.04■■■■□ 3.36
SNRNP70-204ENST00000595231 NUP153P49790 1475 aaKnown RBP35.95■■■■□ 3.35
SNRNP70-204ENST00000595231 KDM5BQ9UGL1 1544 aa35.95■■■■□ 3.35
SNRNP70-204ENST00000595231 CASKIN1Q8WXD9 1431 aa35.92■■■■□ 3.34
SNRNP70-204ENST00000595231 NPM1P06748 294 aaKnown RBP eCLIP35.91■■■■□ 3.34
SNRNP70-204ENST00000595231 PCF11O94913 1555 aaKnown RBP35.91■■■■□ 3.34
SNRNP70-204ENST00000595231 ARID3CA6NKF2 412 aa35.88■■■■□ 3.33
SNRNP70-204ENST00000595231 ATP10BO94823 1461 aa35.87■■■■□ 3.33
SNRNP70-204ENST00000595231 VPS8Q8N3P4 1428 aa35.87■■■■□ 3.33
SNRNP70-204ENST00000595231 ZCCHC11Q5TAX3 1644 aaKnown RBP35.86■■■■□ 3.33
SNRNP70-204ENST00000595231 ATP1B4Q9UN42 357 aaPredicted RBP35.86■■■■□ 3.33
SNRNP70-204ENST00000595231 HECW1Q76N89 1606 aa35.86■■■■□ 3.33
SNRNP70-204ENST00000595231 FYCO1Q9BQS8 1478 aa35.85■■■■□ 3.33
SNRNP70-204ENST00000595231 EPRSP07814 1512 aaKnown RBP35.79■■■■□ 3.32
SNRNP70-204ENST00000595231 LRRIQ1Q96JM4 1722 aa35.79■■■■□ 3.32
SNRNP70-204ENST00000595231 MAPKBP1O60336 1514 aa35.78■■■■□ 3.32
SNRNP70-204ENST00000595231 CDK13Q14004 1512 aaKnown RBP35.75■■■■□ 3.31
SNRNP70-204ENST00000595231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.72■■■■□ 3.31
SNRNP70-204ENST00000595231 HNRNPUL2Q1KMD3 747 aaKnown RBP35.72■■■■□ 3.31
SNRNP70-204ENST00000595231 ASXL2Q76L83 1435 aa35.72■■■■□ 3.31
SNRNP70-204ENST00000595231 CCDC18Q5T9S5 1454 aa35.68■■■■□ 3.3
SNRNP70-204ENST00000595231 WDR7Q9Y4E6 1490 aa35.62■■■■□ 3.29
SNRNP70-204ENST00000595231 PLEKHD1A6NEE1 506 aa35.59■■■■□ 3.29
SNRNP70-204ENST00000595231 CDK11AQ9UQ88 783 aaPredicted RBP35.56■■■■□ 3.28
SNRNP70-204ENST00000595231 ABCC10Q5T3U5 1492 aa35.54■■■■□ 3.28
SNRNP70-204ENST00000595231 MAGI3Q5TCQ9 1506 aa35.51■■■■□ 3.28
SNRNP70-204ENST00000595231 KCNH8Q96L42 1107 aa35.51■■■■□ 3.28
SNRNP70-204ENST00000595231 TIAM1Q13009 1591 aa35.5■■■■□ 3.27
SNRNP70-204ENST00000595231 DIP2BQ9P265 1576 aa35.5■■■■□ 3.27
SNRNP70-204ENST00000595231 CFAP43Q8NDM7 1665 aa35.49■■■■□ 3.27
SNRNP70-204ENST00000595231 MAP3K1Q13233 1512 aa35.49■■■■□ 3.27
SNRNP70-204ENST00000595231 TROQ12816 1431 aaPredicted RBP35.46■■■■□ 3.27
SNRNP70-204ENST00000595231 KIF13AQ9H1H9 1805 aa35.46■■■■□ 3.27
SNRNP70-204ENST00000595231 TRHP20396 242 aaPredicted RBP35.46■■■■□ 3.27
SNRNP70-204ENST00000595231 FAM69CQ0P6D2 419 aa35.46■■■■□ 3.27
SNRNP70-204ENST00000595231 GLI2P10070 1586 aa35.42■■■■□ 3.26
SNRNP70-204ENST00000595231 APLP2Q06481 763 aa35.4■■■■□ 3.26
SNRNP70-204ENST00000595231 MTUS2Q5JR59 1369 aa35.38■■■■□ 3.25
SNRNP70-204ENST00000595231 KANK4Q5T7N3 995 aaPredicted RBP35.38■■■■□ 3.25
SNRNP70-204ENST00000595231 LRRC9Q6ZRR7 1453 aa35.35■■■■□ 3.25
SNRNP70-204ENST00000595231 KIF14Q15058 1648 aa35.34■■■■□ 3.25
SNRNP70-204ENST00000595231 ABCA9Q8IUA7 1624 aa35.32■■■■□ 3.24
SNRNP70-204ENST00000595231 EHBP1L1Q8N3D4 1523 aa35.32■■■■□ 3.24
SNRNP70-204ENST00000595231 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.32■■■■□ 3.243e-8■■■□□ 15.3
SNRNP70-204ENST00000595231 MAP3K4Q9Y6R4 1608 aa35.29■■■■□ 3.24
SNRNP70-204ENST00000595231 TTC37Q6PGP7 1564 aa35.27■■■■□ 3.24
SNRNP70-204ENST00000595231 CD109Q6YHK3 1445 aa35.24■■■■□ 3.23
SNRNP70-204ENST00000595231 TSPOAP1O95153 1857 aa35.18■■■■□ 3.22
SNRNP70-204ENST00000595231 SUPT6HQ7KZ85 1726 aaKnown RBP35.18■■■■□ 3.22
SNRNP70-204ENST00000595231 PPRC1Q5VV67 1664 aaKnown RBP35.16■■■■□ 3.22
SNRNP70-204ENST00000595231 NCOA2Q15596 1464 aa35.16■■■■□ 3.22
SNRNP70-204ENST00000595231 PLCH2O75038 1416 aa35.12■■■■□ 3.21
SNRNP70-204ENST00000595231 PPARGC1BQ86YN6 1023 aaKnown RBP35.1■■■■□ 3.21
SNRNP70-204ENST00000595231 MYO5CQ9NQX4 1742 aa35.1■■■■□ 3.21
SNRNP70-204ENST00000595231 GPATCH8Q9UKJ3 1502 aaKnown RBP35.09■■■■□ 3.21
SNRNP70-204ENST00000595231 CDC42BPAQ5VT25 1732 aa35.07■■■■□ 3.21
SNRNP70-204ENST00000595231 CCNB3Q8WWL7 1395 aa35.07■■■■□ 3.21
SNRNP70-204ENST00000595231 CDC42BPBQ9Y5S2 1711 aa35.05■■■■□ 3.2
SNRNP70-204ENST00000595231 ARAP3Q8WWN8 1544 aa35.04■■■■□ 3.2
SNRNP70-204ENST00000595231 PREX2Q70Z35 1606 aa35.03■■■■□ 3.2
SNRNP70-204ENST00000595231 TEX14Q8IWB6 1497 aa35.03■■■■□ 3.2
SNRNP70-204ENST00000595231 FANCAO15360 1455 aa34.99■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms