RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 CUL7Q14999 1698 aa39.66■■■■□ 3.94
SSBP4-203ENST00000593641 IGF1RP08069 1367 aa39.6■■■■□ 3.93
SSBP4-203ENST00000593641 KIAA0586Q9BVV6 1533 aa39.55■■■■□ 3.92
SSBP4-203ENST00000593641 KIF13AQ9H1H9 1805 aa39.54■■■■□ 3.92
SSBP4-203ENST00000593641 NPM1P06748 294 aaKnown RBP eCLIP39.44■■■■□ 3.9
SSBP4-203ENST00000593641 ADCY10Q96PN6 1610 aa39.39■■■■□ 3.9
SSBP4-203ENST00000593641 CARMIL1Q5VZK9 1371 aa39.38■■■■□ 3.89
SSBP4-203ENST00000593641 AEBP2Q6ZN18 517 aaPredicted RBP39.38■■■■□ 3.89
SSBP4-203ENST00000593641 MAPKBP1O60336 1514 aa39.36■■■■□ 3.89
SSBP4-203ENST00000593641 ABCC10Q5T3U5 1492 aa39.31■■■■□ 3.88
SSBP4-203ENST00000593641 FAM69CQ0P6D2 419 aa39.28■■■■□ 3.88
SSBP4-203ENST00000593641 DIP2BQ9P265 1576 aa39.25■■■■□ 3.87
SSBP4-203ENST00000593641 IQGAP2Q13576 1575 aa39.21■■■■□ 3.87
SSBP4-203ENST00000593641 CARMIL2Q6F5E8 1435 aa39.2■■■■□ 3.87
SSBP4-203ENST00000593641 PTPRGP23470 1445 aa39.19■■■■□ 3.86
SSBP4-203ENST00000593641 TNIKQ9UKE5 1360 aa39.12■■■■□ 3.85
SSBP4-203ENST00000593641 TTBK1Q5TCY1 1321 aaPredicted RBP39.12■■■■□ 3.85
SSBP4-203ENST00000593641 RAPGEF2Q9Y4G8 1499 aa39.05■■■■□ 3.84
SSBP4-203ENST00000593641 TSPOAP1O95153 1857 aa39.04■■■■□ 3.84
SSBP4-203ENST00000593641 ABCC2Q92887 1545 aa39.01■■■■□ 3.84
SSBP4-203ENST00000593641 DISP1Q96F81 1524 aa38.96■■■■□ 3.83
SSBP4-203ENST00000593641 KDM6BO15054 1643 aa38.95■■■■□ 3.83
SSBP4-203ENST00000593641 UGGT2Q9NYU1 1516 aa38.92■■■■□ 3.82
SSBP4-203ENST00000593641 UHRF1BP1LA0JNW5 1464 aa38.92■■■■□ 3.82
SSBP4-203ENST00000593641 UACAQ9BZF9 1416 aa38.89■■■■□ 3.82
SSBP4-203ENST00000593641 PLB1Q6P1J6 1458 aa38.87■■■■□ 3.81
SSBP4-203ENST00000593641 ASXL2Q76L83 1435 aa38.87■■■■□ 3.81
SSBP4-203ENST00000593641 KIAA0556O60303 1618 aa38.84■■■■□ 3.81
SSBP4-203ENST00000593641 CTTNBP2Q8WZ74 1663 aa38.81■■■■□ 3.8
SSBP4-203ENST00000593641 GLI2P10070 1586 aa38.78■■■■□ 3.8
SSBP4-203ENST00000593641 KDM5BQ9UGL1 1544 aa38.74■■■■□ 3.79
SSBP4-203ENST00000593641 ZCCHC11Q5TAX3 1644 aaKnown RBP38.7■■■■□ 3.79
SSBP4-203ENST00000593641 PPRC1Q5VV67 1664 aaKnown RBP38.69■■■■□ 3.78
SSBP4-203ENST00000593641 GOLGA3Q08378 1498 aa38.64■■■■□ 3.78
SSBP4-203ENST00000593641 EPRSP07814 1512 aaKnown RBP38.63■■■■□ 3.78
SSBP4-203ENST00000593641 PRXQ9BXM0 1461 aa38.6■■■■□ 3.77
SSBP4-203ENST00000593641 MAP3K4Q9Y6R4 1608 aa38.58■■■■□ 3.77
SSBP4-203ENST00000593641 TEX14Q8IWB6 1497 aa38.51■■■■□ 3.76
SSBP4-203ENST00000593641 WDR7Q9Y4E6 1490 aa38.5■■■■□ 3.75
SSBP4-203ENST00000593641 KDM4FA0A1W2PPD8 638 aa38.47■■■■□ 3.75
SSBP4-203ENST00000593641 ABCA8O94911 1581 aa38.46■■■■□ 3.75
SSBP4-203ENST00000593641 COL17A1Q9UMD9 1497 aaPredicted RBP38.36■■■■□ 3.73
SSBP4-203ENST00000593641 FAM9AQ8IZU1 332 aaPredicted RBP38.33■■■■□ 3.73
SSBP4-203ENST00000593641 CFAP43Q8NDM7 1665 aa38.33■■■■□ 3.73
SSBP4-203ENST00000593641 CSRNP3Q8WYN3 585 aa38.27■■■■□ 3.72
SSBP4-203ENST00000593641 KCNH8Q96L42 1107 aa38.27■■■■□ 3.72
SSBP4-203ENST00000593641 CD109Q6YHK3 1445 aa38.26■■■■□ 3.72
SSBP4-203ENST00000593641 MAGI3Q5TCQ9 1506 aa38.23■■■■□ 3.71
SSBP4-203ENST00000593641 ADGRL1O94910 1474 aa38.22■■■■□ 3.71
SSBP4-203ENST00000593641 P3H3Q8IVL6 736 aa38.22■■■■□ 3.71
SSBP4-203ENST00000593641 SAMD9Q5K651 1589 aa38.19■■■■□ 3.7
SSBP4-203ENST00000593641 EEA1Q15075 1411 aa38.16■■■■□ 3.7
SSBP4-203ENST00000593641 ARID3CA6NKF2 412 aa38.13■■■■□ 3.69
SSBP4-203ENST00000593641 ATP10BO94823 1461 aa38.11■■■■□ 3.69
SSBP4-203ENST00000593641 RAPGEF6Q8TEU7 1601 aa38.08■■■■□ 3.69
SSBP4-203ENST00000593641 ABCA9Q8IUA7 1624 aa37.99■■■■□ 3.67
SSBP4-203ENST00000593641 RANGAP1P46060 587 aaPredicted RBP37.96■■■■□ 3.67
SSBP4-203ENST00000593641 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.94■■■■□ 3.66
SSBP4-203ENST00000593641 HNRNPUL2Q1KMD3 747 aaKnown RBP37.94■■■■□ 3.66
SSBP4-203ENST00000593641 ARAP3Q8WWN8 1544 aa37.93■■■■□ 3.66
SSBP4-203ENST00000593641 FHOD3Q2V2M9 1422 aa37.91■■■■□ 3.66
SSBP4-203ENST00000593641 NUP153P49790 1475 aaKnown RBP37.89■■■■□ 3.66
SSBP4-203ENST00000593641 KIF21BO75037 1637 aa37.87■■■■□ 3.65
SSBP4-203ENST00000593641 PHLDB1Q86UU1 1377 aa37.87■■■■□ 3.65
SSBP4-203ENST00000593641 EFCAB5A4FU69 1503 aa37.82■■■■□ 3.65
SSBP4-203ENST00000593641 NEO1Q92859 1461 aa37.79■■■■□ 3.64
SSBP4-203ENST00000593641 HECW2Q9P2P5 1572 aa37.74■■■■□ 3.63
SSBP4-203ENST00000593641 PLEKHD1A6NEE1 506 aa37.71■■■■□ 3.63
SSBP4-203ENST00000593641 RAPGEF3O95398 923 aa37.68■■■■□ 3.62
SSBP4-203ENST00000593641 FRMPD1Q5SYB0 1578 aa37.62■■■■□ 3.61
SSBP4-203ENST00000593641 CFAP74Q9C0B2 1584 aa37.59■■■■□ 3.61
SSBP4-203ENST00000593641 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.57■■■■□ 3.61
SSBP4-203ENST00000593641 UBTFP17480 764 aaKnown RBP37.57■■■■□ 3.6
SSBP4-203ENST00000593641 EHMT2Q96KQ7 1210 aa37.54■■■■□ 3.6
SSBP4-203ENST00000593641 FANCAO15360 1455 aa37.53■■■■□ 3.6
SSBP4-203ENST00000593641 CDK13Q14004 1512 aaKnown RBP37.53■■■■□ 3.6
SSBP4-203ENST00000593641 TTC37Q6PGP7 1564 aa37.53■■■■□ 3.6
SSBP4-203ENST00000593641 ADAMTSL3P82987 1691 aa37.53■■■■□ 3.6
SSBP4-203ENST00000593641 AKNAQ7Z591 1439 aa37.52■■■■□ 3.6
SSBP4-203ENST00000593641 DENND4BO75064 1496 aaPredicted RBP37.52■■■■□ 3.6
SSBP4-203ENST00000593641 RICTORQ6R327 1708 aa37.51■■■■□ 3.6
SSBP4-203ENST00000593641 ARHGEF40Q8TER5 1519 aa37.48■■■■□ 3.59
SSBP4-203ENST00000593641 FMN1Q68DA7 1419 aa37.48■■■■□ 3.59
SSBP4-203ENST00000593641 BCORL1Q5H9F3 1711 aa37.47■■■■□ 3.59
SSBP4-203ENST00000593641 ARID4BQ4LE39 1312 aaPredicted RBP37.46■■■■□ 3.59
SSBP4-203ENST00000593641 CHIC1Q5VXU3 224 aa37.46■■■■□ 3.59
SSBP4-203ENST00000593641 HECW1Q76N89 1606 aa37.46■■■■□ 3.59
SSBP4-203ENST00000593641 PTPRMP28827 1452 aa37.44■■■■□ 3.58
SSBP4-203ENST00000593641 ARHGAP35Q9NRY4 1499 aa37.41■■■■□ 3.58
SSBP4-203ENST00000593641 ATP1B4Q9UN42 357 aaPredicted RBP37.41■■■■□ 3.58
SSBP4-203ENST00000593641 ILDR1Q86SU0 546 aaPredicted RBP37.38■■■■□ 3.57
SSBP4-203ENST00000593641 MADDQ8WXG6 1647 aa37.37■■■■□ 3.57
SSBP4-203ENST00000593641 ZMYM4Q5VZL5 1548 aa37.36■■■■□ 3.57
SSBP4-203ENST00000593641 CDK11AQ9UQ88 783 aaPredicted RBP37.32■■■■□ 3.56
SSBP4-203ENST00000593641 PLCH2O75038 1416 aa37.32■■■■□ 3.56
SSBP4-203ENST00000593641 MYO5CQ9NQX4 1742 aa37.31■■■■□ 3.56
SSBP4-203ENST00000593641 ZFYVE16Q7Z3T8 1539 aa37.31■■■■□ 3.56
SSBP4-203ENST00000593641 MAGI2Q86UL8 1455 aa37.27■■■■□ 3.56
SSBP4-203ENST00000593641 RIMS1Q86UR5 1692 aaKnown RBP37.26■■■■□ 3.56
SSBP4-203ENST00000593641 POGZQ7Z3K3 1410 aa37.26■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms