RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 KDM4FA0A1W2PPD8 638 aa16.67■□□□□ 0.26
SRRM1-221ENST00000593639 SUPT5HO00267 1087 aaKnown RBP16.67■□□□□ 0.26
SRRM1-221ENST00000593639 NPM1P06748 294 aaKnown RBP eCLIP16.65■□□□□ 0.26
SRRM1-221ENST00000593639 BIVM-ERCC5R4GMW8 1640 aa16.65■□□□□ 0.26
SRRM1-221ENST00000593639 MAPKBP1O60336 1514 aa16.63■□□□□ 0.25
SRRM1-221ENST00000593639 RUSC2Q8N2Y8 1516 aa16.6■□□□□ 0.25
SRRM1-221ENST00000593639 DIP2BQ9P265 1576 aa16.6■□□□□ 0.25
SRRM1-221ENST00000593639 ADCY10Q96PN6 1610 aa16.58■□□□□ 0.24
SRRM1-221ENST00000593639 KDM6BO15054 1643 aa16.54■□□□□ 0.24
SRRM1-221ENST00000593639 ILDR1Q86SU0 546 aaPredicted RBP16.53■□□□□ 0.24
SRRM1-221ENST00000593639 KIAA0586Q9BVV6 1533 aa16.51■□□□□ 0.23
SRRM1-221ENST00000593639 IGF1RP08069 1367 aa16.49■□□□□ 0.23
SRRM1-221ENST00000593639 PTPRGP23470 1445 aa16.46■□□□□ 0.23
SRRM1-221ENST00000593639 TTBK1Q5TCY1 1321 aaPredicted RBP16.45■□□□□ 0.22
SRRM1-221ENST00000593639 KIF27Q86VH2 1401 aa16.41■□□□□ 0.22
SRRM1-221ENST00000593639 TSPOAP1O95153 1857 aa16.41■□□□□ 0.22
SRRM1-221ENST00000593639 ASXL2Q76L83 1435 aa16.4■□□□□ 0.22
SRRM1-221ENST00000593639 ABCC2Q92887 1545 aa16.4■□□□□ 0.22
SRRM1-221ENST00000593639 TNIKQ9UKE5 1360 aa16.38■□□□□ 0.21
SRRM1-221ENST00000593639 ADGRL1O94910 1474 aa16.38■□□□□ 0.21
SRRM1-221ENST00000593639 PLB1Q6P1J6 1458 aa16.36■□□□□ 0.21
SRRM1-221ENST00000593639 COL17A1Q9UMD9 1497 aaPredicted RBP16.36■□□□□ 0.21
SRRM1-221ENST00000593639 CARMIL1Q5VZK9 1371 aa16.35■□□□□ 0.21
SRRM1-221ENST00000593639 CARMIL2Q6F5E8 1435 aa16.35■□□□□ 0.21
SRRM1-221ENST00000593639 GLI2P10070 1586 aa16.34■□□□□ 0.21
SRRM1-221ENST00000593639 CUL7Q14999 1698 aa16.34■□□□□ 0.21
SRRM1-221ENST00000593639 UHRF1BP1LA0JNW5 1464 aa16.32■□□□□ 0.2
SRRM1-221ENST00000593639 PPRC1Q5VV67 1664 aaKnown RBP16.32■□□□□ 0.2
SRRM1-221ENST00000593639 UACAQ9BZF9 1416 aa16.31■□□□□ 0.2
SRRM1-221ENST00000593639 EPRSP07814 1512 aaKnown RBP16.29■□□□□ 0.2
SRRM1-221ENST00000593639 DISP1Q96F81 1524 aa16.27■□□□□ 0.2
SRRM1-221ENST00000593639 IQGAP2Q13576 1575 aa16.26■□□□□ 0.19
SRRM1-221ENST00000593639 KDM5BQ9UGL1 1544 aa16.25■□□□□ 0.19
SRRM1-221ENST00000593639 HECW2Q9P2P5 1572 aa16.25■□□□□ 0.19
SRRM1-221ENST00000593639 TEX14Q8IWB6 1497 aa16.23■□□□□ 0.19
SRRM1-221ENST00000593639 MAP3K4Q9Y6R4 1608 aa16.22■□□□□ 0.19
SRRM1-221ENST00000593639 UGGT2Q9NYU1 1516 aa16.17■□□□□ 0.18
SRRM1-221ENST00000593639 WDR7Q9Y4E6 1490 aa16.16■□□□□ 0.18
SRRM1-221ENST00000593639 ZCCHC11Q5TAX3 1644 aaKnown RBP16.16■□□□□ 0.18
SRRM1-221ENST00000593639 KIAA0556O60303 1618 aa16.12■□□□□ 0.17
SRRM1-221ENST00000593639 RAPGEF2Q9Y4G8 1499 aa16.12■□□□□ 0.17
SRRM1-221ENST00000593639 CD109Q6YHK3 1445 aa16.11■□□□□ 0.17
SRRM1-221ENST00000593639 MAGI3Q5TCQ9 1506 aa16.1■□□□□ 0.17
SRRM1-221ENST00000593639 KCNH8Q96L42 1107 aa16.1■□□□□ 0.17
SRRM1-221ENST00000593639 FBXO41Q8TF61 875 aa16.06■□□□□ 0.16
SRRM1-221ENST00000593639 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
SRRM1-221ENST00000593639 ABCA8O94911 1581 aa16.02■□□□□ 0.16
SRRM1-221ENST00000593639 CFAP43Q8NDM7 1665 aa15.99■□□□□ 0.15
SRRM1-221ENST00000593639 ARAP3Q8WWN8 1544 aa15.99■□□□□ 0.15
SRRM1-221ENST00000593639 GOLGA3Q08378 1498 aa15.98■□□□□ 0.15
SRRM1-221ENST00000593639 KIF21BO75037 1637 aa15.98■□□□□ 0.15
SRRM1-221ENST00000593639 ARID3CA6NKF2 412 aa15.98■□□□□ 0.15
SRRM1-221ENST00000593639 PTPRMP28827 1452 aa15.97■□□□□ 0.15
SRRM1-221ENST00000593639 RAPGEF3O95398 923 aa15.94■□□□□ 0.14
SRRM1-221ENST00000593639 ATP10BO94823 1461 aa15.93■□□□□ 0.14
SRRM1-221ENST00000593639 PHLDB1Q86UU1 1377 aa15.91■□□□□ 0.14
SRRM1-221ENST00000593639 P3H3Q8IVL6 736 aa15.9■□□□□ 0.14
SRRM1-221ENST00000593639 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
SRRM1-221ENST00000593639 ADAMTSL3P82987 1691 aa15.89■□□□□ 0.13
SRRM1-221ENST00000593639 CTTNBP2Q8WZ74 1663 aa15.87■□□□□ 0.13
SRRM1-221ENST00000593639 LMTK3Q96Q04 1460 aa15.86■□□□□ 0.13
SRRM1-221ENST00000593639 ARID4BQ4LE39 1312 aaPredicted RBP15.86■□□□□ 0.13
SRRM1-221ENST00000593639 PCF11O94913 1555 aaKnown RBP15.85■□□□□ 0.13
SRRM1-221ENST00000593639 NEO1Q92859 1461 aa15.84■□□□□ 0.13
SRRM1-221ENST00000593639 ABCA9Q8IUA7 1624 aa15.84■□□□□ 0.13
SRRM1-221ENST00000593639 FAM9AQ8IZU1 332 aaPredicted RBP15.83■□□□□ 0.12
SRRM1-221ENST00000593639 FRMPD1Q5SYB0 1578 aa15.82■□□□□ 0.12
SRRM1-221ENST00000593639 MADDQ8WXG6 1647 aa15.81■□□□□ 0.12
SRRM1-221ENST00000593639 BCORL1Q5H9F3 1711 aa15.8■□□□□ 0.12
SRRM1-221ENST00000593639 HSPA2P54652 639 aa15.8■□□□□ 0.12
SRRM1-221ENST00000593639 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.79■□□□□ 0.12
SRRM1-221ENST00000593639 HNRNPUL2Q1KMD3 747 aaKnown RBP15.79■□□□□ 0.12
SRRM1-221ENST00000593639 PLPPR3Q6T4P5 718 aa15.76■□□□□ 0.11
SRRM1-221ENST00000593639 DENND4BO75064 1496 aaPredicted RBP15.75■□□□□ 0.11
SRRM1-221ENST00000593639 NUP153P49790 1475 aaKnown RBP15.75■□□□□ 0.11
SRRM1-221ENST00000593639 ARHGEF40Q8TER5 1519 aa15.74■□□□□ 0.11
SRRM1-221ENST00000593639 FHOD3Q2V2M9 1422 aa15.73■□□□□ 0.11
SRRM1-221ENST00000593639 SAMD9Q5K651 1589 aa15.73■□□□□ 0.11
SRRM1-221ENST00000593639 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
SRRM1-221ENST00000593639 AKNAQ7Z591 1439 aa15.72■□□□□ 0.11
SRRM1-221ENST00000593639 CERKQ8TCT0 537 aa15.72■□□□□ 0.11
SRRM1-221ENST00000593639 RIMS1Q86UR5 1692 aaKnown RBP15.7■□□□□ 0.1
SRRM1-221ENST00000593639 YEATS2Q9ULM3 1422 aa15.7■□□□□ 0.1
SRRM1-221ENST00000593639 PLEKHD1A6NEE1 506 aa15.7■□□□□ 0.1
SRRM1-221ENST00000593639 FANCAO15360 1455 aa15.7■□□□□ 0.1
SRRM1-221ENST00000593639 POGZQ7Z3K3 1410 aa15.68■□□□□ 0.1
SRRM1-221ENST00000593639 RANGAP1P46060 587 aaPredicted RBP15.68■□□□□ 0.1
SRRM1-221ENST00000593639 MLECQ14165 292 aa15.68■□□□□ 0.1
SRRM1-221ENST00000593639 CSRNP3Q8WYN3 585 aa15.68■□□□□ 0.1
SRRM1-221ENST00000593639 RICTORQ6R327 1708 aa15.65■□□□□ 0.1
SRRM1-221ENST00000593639 ZMYM4Q5VZL5 1548 aa15.65■□□□□ 0.1
SRRM1-221ENST00000593639 ZFYVE16Q7Z3T8 1539 aa15.65■□□□□ 0.1
SRRM1-221ENST00000593639 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.65■□□□□ 0.1
SRRM1-221ENST00000593639 SIGLEC1Q9BZZ2 1709 aa15.63■□□□□ 0.09
SRRM1-221ENST00000593639 MAGI2Q86UL8 1455 aa15.63■□□□□ 0.09
SRRM1-221ENST00000593639 EFCAB5A4FU69 1503 aa15.63■□□□□ 0.09
SRRM1-221ENST00000593639 ILDR2Q71H61 639 aa15.62■□□□□ 0.09
SRRM1-221ENST00000593639 TTC37Q6PGP7 1564 aa15.61■□□□□ 0.09
SRRM1-221ENST00000593639 SCAPERQ9BY12 1400 aa15.6■□□□□ 0.09
SRRM1-221ENST00000593639 CFAP74Q9C0B2 1584 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms