RNA–Protein interactions for RNA: ENST00000593064.5

TCF3-218, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-218ENST00000593064 MYT1Q01538 1121 aa22.35■■□□□ 1.17
TCF3-218ENST00000593064 TIAM1Q13009 1591 aa22.33■■□□□ 1.16
TCF3-218ENST00000593064 SIN3AQ96ST3 1273 aa22.31■■□□□ 1.16
TCF3-218ENST00000593064 P3H3Q8IVL6 736 aa22.31■■□□□ 1.16
TCF3-218ENST00000593064 PHLDB1Q86UU1 1377 aa22.3■■□□□ 1.16
TCF3-218ENST00000593064 FAM50AQ14320 339 aaKnown RBP22.29■■□□□ 1.16
TCF3-218ENST00000593064 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
TCF3-218ENST00000593064 PRDM2Q13029 1718 aa22.27■■□□□ 1.15
TCF3-218ENST00000593064 SETD5Q9C0A6 1442 aa22.26■■□□□ 1.15
TCF3-218ENST00000593064 LRRC9Q6ZRR7 1453 aa22.26■■□□□ 1.15
TCF3-218ENST00000593064 ATP1B4Q9UN42 357 aaPredicted RBP22.25■■□□□ 1.15
TCF3-218ENST00000593064 TOPBP1Q92547 1522 aa22.25■■□□□ 1.15
TCF3-218ENST00000593064 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
TCF3-218ENST00000593064 WDR97A6NE52 1622 aa22.24■■□□□ 1.15
TCF3-218ENST00000593064 DDX10Q13206 875 aaKnown RBP22.24■■□□□ 1.15
TCF3-218ENST00000593064 URB2Q14146 1524 aaKnown RBP22.22■■□□□ 1.15
TCF3-218ENST00000593064 POLA1P09884 1462 aaPredicted RBP22.22■■□□□ 1.15
TCF3-218ENST00000593064 HIRIP3Q9BW71 556 aaPredicted RBP22.22■■□□□ 1.15
TCF3-218ENST00000593064 PDS5BQ9NTI5 1447 aa22.21■■□□□ 1.15
TCF3-218ENST00000593064 LAMC3Q9Y6N6 1575 aa22.19■■□□□ 1.14
TCF3-218ENST00000593064 MAP3K1Q13233 1512 aa22.18■■□□□ 1.14
TCF3-218ENST00000593064 TSHZ2Q9NRE2 1034 aa22.17■■□□□ 1.14
TCF3-218ENST00000593064 PCF11O94913 1555 aaKnown RBP22.16■■□□□ 1.14
TCF3-218ENST00000593064 BCANQ96GW7 911 aa22.15■■□□□ 1.14
TCF3-218ENST00000593064 DNMBPQ6XZF7 1577 aa22.14■■□□□ 1.14
TCF3-218ENST00000593064 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
TCF3-218ENST00000593064 FHOD3Q2V2M9 1422 aa22.12■■□□□ 1.13
TCF3-218ENST00000593064 CFAP43Q8NDM7 1665 aa22.09■■□□□ 1.13
TCF3-218ENST00000593064 FHAD1B1AJZ9 1412 aa22.09■■□□□ 1.13
TCF3-218ENST00000593064 PPP1R15AO75807 674 aaPredicted RBP22.07■■□□□ 1.12
TCF3-218ENST00000593064 FKBP8Q14318 412 aa22.03■■□□□ 1.12
TCF3-218ENST00000593064 TRIM52Q96A61 297 aa22■■□□□ 1.11
TCF3-218ENST00000593064 ABCA10Q8WWZ4 1543 aa21.99■■□□□ 1.11
TCF3-218ENST00000593064 AQRO60306 1485 aaKnown RBP eCLIP21.98■■□□□ 1.117e-7■■■□□ 18.9
TCF3-218ENST00000593064 ERCC6Q03468 1493 aa21.98■■□□□ 1.11
TCF3-218ENST00000593064 FYCO1Q9BQS8 1478 aa21.95■■□□□ 1.1
TCF3-218ENST00000593064 CASKIN1Q8WXD9 1431 aa21.94■■□□□ 1.1
TCF3-218ENST00000593064 TIMELESSQ9UNS1 1208 aa21.92■■□□□ 1.1
TCF3-218ENST00000593064 GAPVD1Q14C86 1478 aa21.91■■□□□ 1.1
TCF3-218ENST00000593064 PTPRKQ15262 1439 aa21.91■■□□□ 1.1
TCF3-218ENST00000593064 FGD6Q6ZV73 1430 aa21.9■■□□□ 1.1
TCF3-218ENST00000593064 ANP32CO43423 234 aa21.89■■□□□ 1.1
TCF3-218ENST00000593064 MRC2Q9UBG0 1479 aa21.88■■□□□ 1.09
TCF3-218ENST00000593064 CCDC18Q5T9S5 1454 aa21.87■■□□□ 1.09
TCF3-218ENST00000593064 TONSLQ96HA7 1378 aa21.87■■□□□ 1.09
TCF3-218ENST00000593064 EFCAB5A4FU69 1503 aa21.87■■□□□ 1.09
TCF3-218ENST00000593064 FBLN2P98095 1184 aa21.86■■□□□ 1.09
TCF3-218ENST00000593064 ZNF608Q9ULD9 1512 aaPredicted RBP21.86■■□□□ 1.09
TCF3-218ENST00000593064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.85■■□□□ 1.094e-6■□□□□ 8.2
TCF3-218ENST00000593064 CCER2I3L3R5 266 aa21.84■■□□□ 1.09
TCF3-218ENST00000593064 MTUS2Q5JR59 1369 aa21.84■■□□□ 1.09
TCF3-218ENST00000593064 CTTNBP2Q8WZ74 1663 aa21.83■■□□□ 1.09
TCF3-218ENST00000593064 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.08
TCF3-218ENST00000593064 ARID3CA6NKF2 412 aa21.81■■□□□ 1.08
TCF3-218ENST00000593064 ANP32EQ9BTT0 268 aa21.8■■□□□ 1.08
TCF3-218ENST00000593064 LRRIQ1Q96JM4 1722 aa21.8■■□□□ 1.08
TCF3-218ENST00000593064 FMN1Q68DA7 1419 aa21.8■■□□□ 1.08
TCF3-218ENST00000593064 NEFLP07196 543 aa21.79■■□□□ 1.08
TCF3-218ENST00000593064 HFM1A2PYH4 1435 aa21.79■■□□□ 1.08
TCF3-218ENST00000593064 PTPN23Q9H3S7 1636 aa21.79■■□□□ 1.08
TCF3-218ENST00000593064 UACAQ9BZF9 1416 aa21.78■■□□□ 1.08
TCF3-218ENST00000593064 CUL7Q14999 1698 aa21.77■■□□□ 1.08
TCF3-218ENST00000593064 TARBP1Q13395 1621 aaKnown RBP21.76■■□□□ 1.07
TCF3-218ENST00000593064 NAIPQ13075 1403 aa21.76■■□□□ 1.07
TCF3-218ENST00000593064 NCOA2Q15596 1464 aa21.75■■□□□ 1.07
TCF3-218ENST00000593064 ABCA5Q8WWZ7 1642 aa21.73■■□□□ 1.07
TCF3-218ENST00000593064 RRP7BPQ9NSQ0 103 aa21.72■■□□□ 1.07
TCF3-218ENST00000593064 CHIC2Q9UKJ5 165 aa21.72■■□□□ 1.07
TCF3-218ENST00000593064 KDM5BQ9UGL1 1544 aa21.71■■□□□ 1.07
TCF3-218ENST00000593064 MYOM3Q5VTT5 1437 aa21.71■■□□□ 1.07
TCF3-218ENST00000593064 RBM19Q9Y4C8 960 aaKnown RBP21.71■■□□□ 1.07
TCF3-218ENST00000593064 GRIN2BQ13224 1484 aa21.68■■□□□ 1.06
TCF3-218ENST00000593064 SAMD9Q5K651 1589 aa21.67■■□□□ 1.06
TCF3-218ENST00000593064 IRX6P78412 446 aaPredicted RBP21.67■■□□□ 1.06
TCF3-218ENST00000593064 HNRNPUQ00839 825 aaKnown RBP eCLIP21.66■■□□□ 1.06
TCF3-218ENST00000593064 MAGI3Q5TCQ9 1506 aa21.64■■□□□ 1.06
TCF3-218ENST00000593064 WASHC2AQ641Q2 1341 aa21.63■■□□□ 1.05
TCF3-218ENST00000593064 CHMP7Q8WUX9 453 aaPredicted RBP21.63■■□□□ 1.05
TCF3-218ENST00000593064 WDR62O43379 1518 aa21.63■■□□□ 1.05
TCF3-218ENST00000593064 HSPA5P11021 654 aaKnown RBP21.63■■□□□ 1.05
TCF3-218ENST00000593064 SUPT6HQ7KZ85 1726 aaKnown RBP21.63■■□□□ 1.05
TCF3-218ENST00000593064 DENND4BO75064 1496 aaPredicted RBP21.61■■□□□ 1.05
TCF3-218ENST00000593064 IFT140Q96RY7 1462 aa21.61■■□□□ 1.05
TCF3-218ENST00000593064 KDM6BO15054 1643 aa21.59■■□□□ 1.05
TCF3-218ENST00000593064 FOXD1Q16676 465 aa21.59■■□□□ 1.05
TCF3-218ENST00000593064 CCDC184Q52MB2 194 aa21.58■■□□□ 1.05
TCF3-218ENST00000593064 EHBP1L1Q8N3D4 1523 aa21.58■■□□□ 1.04
TCF3-218ENST00000593064 UGGT2Q9NYU1 1516 aa21.58■■□□□ 1.04
TCF3-218ENST00000593064 PBRM1Q86U86 1689 aa21.55■■□□□ 1.04
TCF3-218ENST00000593064 ARHGEF11O15085 1522 aa21.53■■□□□ 1.04
TCF3-218ENST00000593064 THOC2Q8NI27 1593 aaKnown RBP21.53■■□□□ 1.04
TCF3-218ENST00000593064 C11orf95C9JLR9 678 aaPredicted RBP21.52■■□□□ 1.04
TCF3-218ENST00000593064 EIF4G3O43432 1585 aaKnown RBP21.5■■□□□ 1.03
TCF3-218ENST00000593064 L3MBTL2Q969R5 705 aa21.5■■□□□ 1.03
TCF3-218ENST00000593064 MPHOSPH9Q99550 1183 aa21.5■■□□□ 1.03
TCF3-218ENST00000593064 EIF4G2P78344 907 aaKnown RBP eCLIP21.49■■□□□ 1.03
TCF3-218ENST00000593064 MSH5O43196 834 aa21.49■■□□□ 1.03
TCF3-218ENST00000593064 GCC2Q8IWJ2 1684 aa21.47■■□□□ 1.03
TCF3-218ENST00000593064 ADAMTS12P58397 1594 aa21.47■■□□□ 1.03
TCF3-218ENST00000593064 CDK13Q14004 1512 aaKnown RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms