RNA–Protein interactions for RNA: ENST00000593064.5

TCF3-218, Transcript of transcription factor 3, humanhuman

TSL 2

Gene TCF3, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-218ENST00000593064 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
TCF3-218ENST00000593064 SHROOM4Q9ULL8 1493 aa27.19■■□□□ 1.94
TCF3-218ENST00000593064 SUPT5HO00267 1087 aaKnown RBP26.77■■□□□ 1.88
TCF3-218ENST00000593064 DCAF8L2P0C7V8 631 aa26.71■■□□□ 1.87
TCF3-218ENST00000593064 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
TCF3-218ENST00000593064 ZCCHC6Q5VYS8 1495 aaKnown RBP26.47■■□□□ 1.83
TCF3-218ENST00000593064 MYO15BQ96JP2 1530 aa26.14■■□□□ 1.78
TCF3-218ENST00000593064 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
TCF3-218ENST00000593064 ABCC9O60706 1549 aa25.8■■□□□ 1.72
TCF3-218ENST00000593064 HRCP23327 699 aa25.77■■□□□ 1.72
TCF3-218ENST00000593064 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
TCF3-218ENST00000593064 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
TCF3-218ENST00000593064 LOC105371045A0A1W2PR82 267 aa25.46■■□□□ 1.67
TCF3-218ENST00000593064 PPARGC1BQ86YN6 1023 aaKnown RBP25.42■■□□□ 1.66
TCF3-218ENST00000593064 SCRIBQ14160 1630 aa25.2■■□□□ 1.62
TCF3-218ENST00000593064 TRIM26Q12899 539 aaPredicted RBP24.95■■□□□ 1.58
TCF3-218ENST00000593064 RSF1Q96T23 1441 aaPredicted RBP24.92■■□□□ 1.58
TCF3-218ENST00000593064 NACADO15069 1562 aa24.89■■□□□ 1.58
TCF3-218ENST00000593064 TRIM41Q8WV44 630 aa24.79■■□□□ 1.56
TCF3-218ENST00000593064 FAM9AQ8IZU1 332 aaPredicted RBP24.79■■□□□ 1.56
TCF3-218ENST00000593064 RB1CC1Q8TDY2 1594 aa24.76■■□□□ 1.55
TCF3-218ENST00000593064 EHMT2Q96KQ7 1210 aa24.71■■□□□ 1.55
TCF3-218ENST00000593064 PABPN1Q86U42 306 aaKnown RBP eCLIP24.69■■□□□ 1.543e-7■□□□□ 8.9
TCF3-218ENST00000593064 CECR2Q9BXF3 1484 aa24.56■■□□□ 1.52
TCF3-218ENST00000593064 MROH2BQ7Z745 1585 aa24.41■■□□□ 1.5
TCF3-218ENST00000593064 ZEB1P37275 1124 aaPredicted RBP24.4■■□□□ 1.5
TCF3-218ENST00000593064 WIZO95785 1651 aa24.32■■□□□ 1.48
TCF3-218ENST00000593064 UNC13AQ9UPW8 1703 aa24.28■■□□□ 1.48
TCF3-218ENST00000593064 BICRAQ9NZM4 1560 aa24.08■■□□□ 1.45
TCF3-218ENST00000593064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.07■■□□□ 1.44
TCF3-218ENST00000593064 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
TCF3-218ENST00000593064 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
TCF3-218ENST00000593064 EIF4G1Q04637 1599 aaKnown RBP24.02■■□□□ 1.44
TCF3-218ENST00000593064 TTBK1Q5TCY1 1321 aaPredicted RBP23.96■■□□□ 1.43
TCF3-218ENST00000593064 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
TCF3-218ENST00000593064 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
TCF3-218ENST00000593064 CCDC88BA6NC98 1476 aa23.88■■□□□ 1.41
TCF3-218ENST00000593064 SMARCA4P51532 1647 aa23.87■■□□□ 1.41
TCF3-218ENST00000593064 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
TCF3-218ENST00000593064 SOGA1O94964 1423 aa23.77■■□□□ 1.4
TCF3-218ENST00000593064 SMARCA2P51531 1590 aa23.74■■□□□ 1.39
TCF3-218ENST00000593064 CEP162Q5TB80 1403 aa23.74■■□□□ 1.39
TCF3-218ENST00000593064 RUSC2Q8N2Y8 1516 aa23.68■■□□□ 1.38
TCF3-218ENST00000593064 WRNQ14191 1432 aaPredicted RBP eCLIP23.67■■□□□ 1.38
TCF3-218ENST00000593064 NEUROD1Q13562 356 aa23.65■■□□□ 1.38
TCF3-218ENST00000593064 DIEXFQ68CQ4 756 aaKnown RBP23.62■■□□□ 1.37
TCF3-218ENST00000593064 ACIN1Q9UKV3 1341 aaKnown RBP23.61■■□□□ 1.37
TCF3-218ENST00000593064 UBTFP17480 764 aaKnown RBP23.6■■□□□ 1.37
TCF3-218ENST00000593064 TNIKQ9UKE5 1360 aa23.59■■□□□ 1.37
TCF3-218ENST00000593064 PELP1Q8IZL8 1130 aaKnown RBP23.58■■□□□ 1.37
TCF3-218ENST00000593064 CSRNP3Q8WYN3 585 aa23.58■■□□□ 1.37
TCF3-218ENST00000593064 ATAD2BQ9ULI0 1458 aa23.52■■□□□ 1.36
TCF3-218ENST00000593064 BAZ1BQ9UIG0 1483 aaKnown RBP23.45■■□□□ 1.34
TCF3-218ENST00000593064 GTF3C3Q9Y5Q9 886 aa23.43■■□□□ 1.34
TCF3-218ENST00000593064 EEA1Q15075 1411 aa23.43■■□□□ 1.34
TCF3-218ENST00000593064 GOLGA3Q08378 1498 aa23.41■■□□□ 1.34
TCF3-218ENST00000593064 HNRNPUL2Q1KMD3 747 aaKnown RBP23.34■■□□□ 1.33
TCF3-218ENST00000593064 CENPBP07199 599 aaPredicted RBP23.34■■□□□ 1.33
TCF3-218ENST00000593064 ZNF316A6NFI3 1004 aaPredicted RBP23.31■■□□□ 1.32
TCF3-218ENST00000593064 SYNJ1O43426 1573 aa23.3■■□□□ 1.32
TCF3-218ENST00000593064 PEG3Q9GZU2 1588 aa23.29■■□□□ 1.32
TCF3-218ENST00000593064 RANGAP1P46060 587 aaPredicted RBP23.25■■□□□ 1.31
TCF3-218ENST00000593064 YTHDC1Q96MU7 727 aaKnown RBP23.24■■□□□ 1.31
TCF3-218ENST00000593064 CEP164Q9UPV0 1460 aa23.22■■□□□ 1.31
TCF3-218ENST00000593064 CLIP1P30622 1438 aa23.21■■□□□ 1.31
TCF3-218ENST00000593064 KIF21BO75037 1637 aa23.17■■□□□ 1.3
TCF3-218ENST00000593064 RAPGEF2Q9Y4G8 1499 aa23.14■■□□□ 1.29
TCF3-218ENST00000593064 MIER1Q8N108 512 aa23.14■■□□□ 1.29
TCF3-218ENST00000593064 NCAPD3P42695 1498 aa23.11■■□□□ 1.29
TCF3-218ENST00000593064 VPS8Q8N3P4 1428 aa23.11■■□□□ 1.29
TCF3-218ENST00000593064 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
TCF3-218ENST00000593064 APLP2Q06481 763 aa23.05■■□□□ 1.28
TCF3-218ENST00000593064 CC2D2AQ9P2K1 1620 aa23.03■■□□□ 1.28
TCF3-218ENST00000593064 HMGXB3Q12766 1538 aa22.95■■□□□ 1.26
TCF3-218ENST00000593064 TOP2BQ02880 1626 aa22.88■■□□□ 1.25
TCF3-218ENST00000593064 KANK4Q5T7N3 995 aaPredicted RBP22.85■■□□□ 1.25
TCF3-218ENST00000593064 ARAP1Q96P48 1450 aa22.81■■□□□ 1.24
TCF3-218ENST00000593064 DHX57Q6P158 1386 aaKnown RBP22.8■■□□□ 1.24
TCF3-218ENST00000593064 PRXQ9BXM0 1461 aa22.77■■□□□ 1.24
TCF3-218ENST00000593064 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
TCF3-218ENST00000593064 CFTRP13569 1480 aa22.75■■□□□ 1.23
TCF3-218ENST00000593064 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
TCF3-218ENST00000593064 NESP48681 1621 aa22.73■■□□□ 1.23
TCF3-218ENST00000593064 ERICH3Q5RHP9 1530 aa22.71■■□□□ 1.23
TCF3-218ENST00000593064 CUX1P39880 1505 aa22.68■■□□□ 1.22
TCF3-218ENST00000593064 ITGAEP38570 1179 aa22.65■■□□□ 1.22
TCF3-218ENST00000593064 CLSPNQ9HAW4 1339 aa22.64■■□□□ 1.21
TCF3-218ENST00000593064 RRBP1Q9P2E9 1410 aaKnown RBP22.6■■□□□ 1.21
TCF3-218ENST00000593064 KIF27Q86VH2 1401 aa22.58■■□□□ 1.21
TCF3-218ENST00000593064 ARHGAP35Q9NRY4 1499 aa22.56■■□□□ 1.2
TCF3-218ENST00000593064 CCNB3Q8WWL7 1395 aa22.54■■□□□ 1.2
TCF3-218ENST00000593064 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.2
TCF3-218ENST00000593064 CUX2O14529 1486 aa22.46■■□□□ 1.19
TCF3-218ENST00000593064 SUPT16HQ9Y5B9 1047 aaKnown RBP22.46■■□□□ 1.19
TCF3-218ENST00000593064 KCNH8Q96L42 1107 aa22.44■■□□□ 1.18
TCF3-218ENST00000593064 RAB3GAP2Q9H2M9 1393 aa22.43■■□□□ 1.18
TCF3-218ENST00000593064 FGD5Q6ZNL6 1462 aa22.4■■□□□ 1.18
TCF3-218ENST00000593064 RAD54L2Q9Y4B4 1467 aa22.38■■□□□ 1.17
TCF3-218ENST00000593064 IGF1RP08069 1367 aa22.38■■□□□ 1.17
TCF3-218ENST00000593064 MAPKBP1O60336 1514 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms