RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 JPH4Q96JJ6 628 aa20.19■□□□□ 0.82
DDX39A-219ENST00000592927 DIP2BQ9P265 1576 aa20.19■□□□□ 0.82
DDX39A-219ENST00000592927 MAPKBP1O60336 1514 aa20.17■□□□□ 0.82
DDX39A-219ENST00000592927 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
DDX39A-219ENST00000592927 ADAMTS12P58397 1594 aa20.14■□□□□ 0.81
DDX39A-219ENST00000592927 BIVM-ERCC5R4GMW8 1640 aa20.13■□□□□ 0.81
DDX39A-219ENST00000592927 ADGRL1O94910 1474 aa20.13■□□□□ 0.81
DDX39A-219ENST00000592927 FHAD1B1AJZ9 1412 aa20.13■□□□□ 0.81
DDX39A-219ENST00000592927 HECW2Q9P2P5 1572 aa20.12■□□□□ 0.81
DDX39A-219ENST00000592927 FBXO41Q8TF61 875 aa20.1■□□□□ 0.81
DDX39A-219ENST00000592927 TSPOAP1O95153 1857 aa20.05■□□□□ 0.8
DDX39A-219ENST00000592927 ADCY10Q96PN6 1610 aa20.02■□□□□ 0.8
DDX39A-219ENST00000592927 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
DDX39A-219ENST00000592927 ERICH3Q5RHP9 1530 aa19.93■□□□□ 0.78
DDX39A-219ENST00000592927 COL17A1Q9UMD9 1497 aaPredicted RBP19.9■□□□□ 0.78
DDX39A-219ENST00000592927 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
DDX39A-219ENST00000592927 TTBK1Q5TCY1 1321 aaPredicted RBP19.85■□□□□ 0.77
DDX39A-219ENST00000592927 KIF27Q86VH2 1401 aa19.84■□□□□ 0.77
DDX39A-219ENST00000592927 ASXL2Q76L83 1435 aa19.82■□□□□ 0.76
DDX39A-219ENST00000592927 PPRC1Q5VV67 1664 aaKnown RBP19.81■□□□□ 0.76
DDX39A-219ENST00000592927 LMTK3Q96Q04 1460 aa19.81■□□□□ 0.76
DDX39A-219ENST00000592927 PTPRGP23470 1445 aa19.81■□□□□ 0.76
DDX39A-219ENST00000592927 GLI2P10070 1586 aa19.79■□□□□ 0.76
DDX39A-219ENST00000592927 PLB1Q6P1J6 1458 aa19.79■□□□□ 0.76
DDX39A-219ENST00000592927 ABCC2Q92887 1545 aa19.76■□□□□ 0.75
DDX39A-219ENST00000592927 KIAA0586Q9BVV6 1533 aa19.76■□□□□ 0.75
DDX39A-219ENST00000592927 IGF1RP08069 1367 aa19.71■□□□□ 0.75
DDX39A-219ENST00000592927 TEX14Q8IWB6 1497 aa19.69■□□□□ 0.74
DDX39A-219ENST00000592927 EPRSP07814 1512 aaKnown RBP19.67■□□□□ 0.74
DDX39A-219ENST00000592927 SOCS7O14512 581 aa19.67■□□□□ 0.74
DDX39A-219ENST00000592927 TNIKQ9UKE5 1360 aa19.67■□□□□ 0.74
DDX39A-219ENST00000592927 ILDR2Q71H61 639 aa19.66■□□□□ 0.74
DDX39A-219ENST00000592927 EEA1Q15075 1411 aa19.64■□□□□ 0.73
DDX39A-219ENST00000592927 MAP3K4Q9Y6R4 1608 aa19.62■□□□□ 0.73
DDX39A-219ENST00000592927 CARMIL1Q5VZK9 1371 aa19.62■□□□□ 0.73
DDX39A-219ENST00000592927 FAM9AQ8IZU1 332 aaPredicted RBP19.62■□□□□ 0.73
DDX39A-219ENST00000592927 CARMIL2Q6F5E8 1435 aa19.61■□□□□ 0.73
DDX39A-219ENST00000592927 UHRF1BP1LA0JNW5 1464 aa19.6■□□□□ 0.73
DDX39A-219ENST00000592927 CUL7Q14999 1698 aa19.6■□□□□ 0.73
DDX39A-219ENST00000592927 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
DDX39A-219ENST00000592927 UACAQ9BZF9 1416 aa19.59■□□□□ 0.73
DDX39A-219ENST00000592927 DISP3Q9P2K9 1392 aa19.57■□□□□ 0.72
DDX39A-219ENST00000592927 KDM5BQ9UGL1 1544 aa19.54■□□□□ 0.72
DDX39A-219ENST00000592927 PTPRMP28827 1452 aa19.52■□□□□ 0.72
DDX39A-219ENST00000592927 RAPGEF2Q9Y4G8 1499 aa19.52■□□□□ 0.72
DDX39A-219ENST00000592927 PRXQ9BXM0 1461 aa19.5■□□□□ 0.71
DDX39A-219ENST00000592927 CERKQ8TCT0 537 aa19.48■□□□□ 0.71
DDX39A-219ENST00000592927 KIF21BO75037 1637 aa19.47■□□□□ 0.71
DDX39A-219ENST00000592927 CD109Q6YHK3 1445 aa19.47■□□□□ 0.71
DDX39A-219ENST00000592927 KCNH8Q96L42 1107 aa19.45■□□□□ 0.7
DDX39A-219ENST00000592927 WDR7Q9Y4E6 1490 aa19.44■□□□□ 0.7
DDX39A-219ENST00000592927 MAGI3Q5TCQ9 1506 aa19.44■□□□□ 0.7
DDX39A-219ENST00000592927 ZCCHC11Q5TAX3 1644 aaKnown RBP19.43■□□□□ 0.7
DDX39A-219ENST00000592927 PCF11O94913 1555 aaKnown RBP19.43■□□□□ 0.7
DDX39A-219ENST00000592927 DISP1Q96F81 1524 aa19.41■□□□□ 0.7
DDX39A-219ENST00000592927 HSPA2P54652 639 aa19.4■□□□□ 0.7
DDX39A-219ENST00000592927 IQGAP2Q13576 1575 aa19.38■□□□□ 0.69
DDX39A-219ENST00000592927 ADAMTSL3P82987 1691 aa19.37■□□□□ 0.69
DDX39A-219ENST00000592927 EHMT2Q96KQ7 1210 aa19.35■□□□□ 0.69
DDX39A-219ENST00000592927 ARID4BQ4LE39 1312 aaPredicted RBP19.33■□□□□ 0.69
DDX39A-219ENST00000592927 GOLGA3Q08378 1498 aa19.32■□□□□ 0.68
DDX39A-219ENST00000592927 ARAP3Q8WWN8 1544 aa19.31■□□□□ 0.68
DDX39A-219ENST00000592927 CFAP43Q8NDM7 1665 aa19.31■□□□□ 0.68
DDX39A-219ENST00000592927 UBTFP17480 764 aaKnown RBP19.3■□□□□ 0.68
DDX39A-219ENST00000592927 RAPGEF3O95398 923 aa19.29■□□□□ 0.68
DDX39A-219ENST00000592927 PLPPR3Q6T4P5 718 aa19.28■□□□□ 0.68
DDX39A-219ENST00000592927 MADDQ8WXG6 1647 aa19.26■□□□□ 0.67
DDX39A-219ENST00000592927 UGGT2Q9NYU1 1516 aa19.25■□□□□ 0.67
DDX39A-219ENST00000592927 CTTNBP2Q8WZ74 1663 aa19.24■□□□□ 0.67
DDX39A-219ENST00000592927 BCORL1Q5H9F3 1711 aa19.23■□□□□ 0.67
DDX39A-219ENST00000592927 KIAA0556O60303 1618 aa19.22■□□□□ 0.67
DDX39A-219ENST00000592927 SPATA31D1Q6ZQQ2 1576 aa19.21■□□□□ 0.67
DDX39A-219ENST00000592927 PHLDB1Q86UU1 1377 aa19.2■□□□□ 0.66
DDX39A-219ENST00000592927 RANGAP1P46060 587 aaPredicted RBP19.17■□□□□ 0.66
DDX39A-219ENST00000592927 LOC105371045A0A1W2PR82 267 aa19.15■□□□□ 0.66
DDX39A-219ENST00000592927 RIMS1Q86UR5 1692 aaKnown RBP19.14■□□□□ 0.66
DDX39A-219ENST00000592927 ARID3CA6NKF2 412 aa19.14■□□□□ 0.65
DDX39A-219ENST00000592927 ABCA8O94911 1581 aa19.11■□□□□ 0.65
DDX39A-219ENST00000592927 P3H3Q8IVL6 736 aa19.08■□□□□ 0.64
DDX39A-219ENST00000592927 NEO1Q92859 1461 aa19.08■□□□□ 0.64
DDX39A-219ENST00000592927 DMRT2Q9Y5R5 561 aa19.07■□□□□ 0.64
DDX39A-219ENST00000592927 FRMPD1Q5SYB0 1578 aa19.06■□□□□ 0.64
DDX39A-219ENST00000592927 MLECQ14165 292 aa19.05■□□□□ 0.64
DDX39A-219ENST00000592927 SAMD9Q5K651 1589 aa19.04■□□□□ 0.64
DDX39A-219ENST00000592927 POGZQ7Z3K3 1410 aa19.04■□□□□ 0.64
DDX39A-219ENST00000592927 YEATS2Q9ULM3 1422 aa19.04■□□□□ 0.64
DDX39A-219ENST00000592927 EFCAB5A4FU69 1503 aa19.04■□□□□ 0.64
DDX39A-219ENST00000592927 ATP10BO94823 1461 aa19.03■□□□□ 0.64
DDX39A-219ENST00000592927 ABCA9Q8IUA7 1624 aa19.02■□□□□ 0.64
DDX39A-219ENST00000592927 ARHGEF40Q8TER5 1519 aa19■□□□□ 0.63
DDX39A-219ENST00000592927 CLIP1P30622 1438 aa18.99■□□□□ 0.63
DDX39A-219ENST00000592927 FHOD3Q2V2M9 1422 aa18.99■□□□□ 0.63
DDX39A-219ENST00000592927 FANCAO15360 1455 aa18.98■□□□□ 0.63
DDX39A-219ENST00000592927 ARHGAP35Q9NRY4 1499 aa18.98■□□□□ 0.63
DDX39A-219ENST00000592927 AKNAQ7Z591 1439 aa18.98■□□□□ 0.63
DDX39A-219ENST00000592927 DENND4BO75064 1496 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-219ENST00000592927 CEBPAP49715 358 aaPredicted RBP18.96■□□□□ 0.63
DDX39A-219ENST00000592927 CEP162Q5TB80 1403 aa18.96■□□□□ 0.63
DDX39A-219ENST00000592927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.94■□□□□ 0.62
DDX39A-219ENST00000592927 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms