RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 GOLGA3Q08378 1498 aa28.49■■■□□ 2.15
AP3D1-211ENST00000591650 EHMT2Q96KQ7 1210 aa28.43■■■□□ 2.14
AP3D1-211ENST00000591650 IQGAP2Q13576 1575 aa28.42■■■□□ 2.14
AP3D1-211ENST00000591650 KIAA0586Q9BVV6 1533 aa28.42■■■□□ 2.14
AP3D1-211ENST00000591650 SHROOM2Q13796 1616 aa28.4■■■□□ 2.14
AP3D1-211ENST00000591650 ERCC6L2Q5T890 1561 aa28.25■■■□□ 2.11
AP3D1-211ENST00000591650 UBTFP17480 764 aaKnown RBP28.25■■■□□ 2.11
AP3D1-211ENST00000591650 UGGT2Q9NYU1 1516 aa28.25■■■□□ 2.11
AP3D1-211ENST00000591650 ARHGEF11O15085 1522 aa28.22■■■□□ 2.11
AP3D1-211ENST00000591650 JPH4Q96JJ6 628 aa28.21■■■□□ 2.11
AP3D1-211ENST00000591650 RIMBP3CA6NJZ7 1639 aa28.2■■■□□ 2.1
AP3D1-211ENST00000591650 RIMBP3BA6NNM3 1639 aa28.2■■■□□ 2.1
AP3D1-211ENST00000591650 RIMBP3Q9UFD9 1639 aa28.2■■■□□ 2.1
AP3D1-211ENST00000591650 LOC105371045A0A1W2PR82 267 aa28.18■■■□□ 2.1
AP3D1-211ENST00000591650 PRG4Q92954 1404 aaPredicted RBP28.18■■■□□ 2.1
AP3D1-211ENST00000591650 KIAA0556O60303 1618 aa28.17■■■□□ 2.1
AP3D1-211ENST00000591650 DISP1Q96F81 1524 aa28.16■■■□□ 2.1
AP3D1-211ENST00000591650 SAMD9Q5K651 1589 aa28.16■■■□□ 2.1
AP3D1-211ENST00000591650 TNIKQ9UKE5 1360 aa28.16■■■□□ 2.1
AP3D1-211ENST00000591650 EFCAB5A4FU69 1503 aa28.08■■■□□ 2.09
AP3D1-211ENST00000591650 RANGAP1P46060 587 aaPredicted RBP28.07■■■□□ 2.08
AP3D1-211ENST00000591650 CARMIL2Q6F5E8 1435 aa28.06■■■□□ 2.08
AP3D1-211ENST00000591650 ARAP1Q96P48 1450 aa28.04■■■□□ 2.08
AP3D1-211ENST00000591650 ARHGAP35Q9NRY4 1499 aa28.01■■■□□ 2.07
AP3D1-211ENST00000591650 CEP162Q5TB80 1403 aa28■■■□□ 2.07
AP3D1-211ENST00000591650 CYB5RLQ6IPT4 315 aa27.98■■■□□ 2.07
AP3D1-211ENST00000591650 CLIP1P30622 1438 aa27.97■■■□□ 2.07
AP3D1-211ENST00000591650 FHOD3Q2V2M9 1422 aa27.96■■■□□ 2.07
AP3D1-211ENST00000591650 P3H3Q8IVL6 736 aa27.92■■■□□ 2.06
AP3D1-211ENST00000591650 PTPRGP23470 1445 aa27.87■■■□□ 2.05
AP3D1-211ENST00000591650 TTBK1Q5TCY1 1321 aaPredicted RBP27.85■■■□□ 2.05
AP3D1-211ENST00000591650 ADCY10Q96PN6 1610 aa27.8■■■□□ 2.04
AP3D1-211ENST00000591650 ABCA8O94911 1581 aa27.8■■■□□ 2.04
AP3D1-211ENST00000591650 PLB1Q6P1J6 1458 aa27.78■■■□□ 2.04
AP3D1-211ENST00000591650 RAPGEF6Q8TEU7 1601 aa27.77■■■□□ 2.04
AP3D1-211ENST00000591650 ABCC2Q92887 1545 aa27.75■■■□□ 2.03
AP3D1-211ENST00000591650 PCF11O94913 1555 aaKnown RBP27.74■■■□□ 2.03
AP3D1-211ENST00000591650 FMN1Q68DA7 1419 aa27.73■■■□□ 2.03
AP3D1-211ENST00000591650 UACAQ9BZF9 1416 aa27.73■■■□□ 2.03
AP3D1-211ENST00000591650 UHRF1BP1LA0JNW5 1464 aa27.7■■■□□ 2.03
AP3D1-211ENST00000591650 HECW1Q76N89 1606 aa27.66■■■□□ 2.02
AP3D1-211ENST00000591650 LRRIQ1Q96JM4 1722 aa27.65■■■□□ 2.02
AP3D1-211ENST00000591650 NUP153P49790 1475 aaKnown RBP27.64■■■□□ 2.02
AP3D1-211ENST00000591650 ZCCHC11Q5TAX3 1644 aaKnown RBP27.62■■■□□ 2.01
AP3D1-211ENST00000591650 VPS8Q8N3P4 1428 aa27.61■■■□□ 2.01
AP3D1-211ENST00000591650 FYCO1Q9BQS8 1478 aa27.61■■■□□ 2.01
AP3D1-211ENST00000591650 CASKIN1Q8WXD9 1431 aa27.6■■■□□ 2.01
AP3D1-211ENST00000591650 KDM5BQ9UGL1 1544 aa27.58■■■□□ 2.01
AP3D1-211ENST00000591650 CDK13Q14004 1512 aaKnown RBP27.54■■■□□ 2
AP3D1-211ENST00000591650 EPRSP07814 1512 aaKnown RBP27.51■■■□□ 2
AP3D1-211ENST00000591650 ARID3CA6NKF2 412 aa27.5■■□□□ 1.99
AP3D1-211ENST00000591650 ATP10BO94823 1461 aa27.5■■□□□ 1.99
AP3D1-211ENST00000591650 NPM1P06748 294 aaKnown RBP eCLIP27.47■■□□□ 1.99
AP3D1-211ENST00000591650 CFAP43Q8NDM7 1665 aa27.47■■□□□ 1.99
AP3D1-211ENST00000591650 MAPKBP1O60336 1514 aa27.46■■□□□ 1.99
AP3D1-211ENST00000591650 ATP1B4Q9UN42 357 aaPredicted RBP27.46■■□□□ 1.99
AP3D1-211ENST00000591650 CCDC18Q5T9S5 1454 aa27.45■■□□□ 1.98
AP3D1-211ENST00000591650 ASXL2Q76L83 1435 aa27.39■■□□□ 1.97
AP3D1-211ENST00000591650 TIAM1Q13009 1591 aa27.39■■□□□ 1.97
AP3D1-211ENST00000591650 WDR7Q9Y4E6 1490 aa27.36■■□□□ 1.97
AP3D1-211ENST00000591650 MAGI3Q5TCQ9 1506 aa27.35■■□□□ 1.97
AP3D1-211ENST00000591650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.33■■□□□ 1.96
AP3D1-211ENST00000591650 HNRNPUL2Q1KMD3 747 aaKnown RBP27.33■■□□□ 1.96
AP3D1-211ENST00000591650 DIP2BQ9P265 1576 aa27.31■■□□□ 1.96
AP3D1-211ENST00000591650 KIF13AQ9H1H9 1805 aa27.3■■□□□ 1.96
AP3D1-211ENST00000591650 MAP3K1Q13233 1512 aa27.29■■□□□ 1.96
AP3D1-211ENST00000591650 TRHP20396 242 aaPredicted RBP27.26■■□□□ 1.95
AP3D1-211ENST00000591650 KIF14Q15058 1648 aa27.26■■□□□ 1.95
AP3D1-211ENST00000591650 EHBP1L1Q8N3D4 1523 aa27.24■■□□□ 1.95
AP3D1-211ENST00000591650 TROQ12816 1431 aaPredicted RBP27.24■■□□□ 1.95
AP3D1-211ENST00000591650 ABCC10Q5T3U5 1492 aa27.22■■□□□ 1.95
AP3D1-211ENST00000591650 LRRC9Q6ZRR7 1453 aa27.19■■□□□ 1.94
AP3D1-211ENST00000591650 PLEKHD1A6NEE1 506 aa27.19■■□□□ 1.94
AP3D1-211ENST00000591650 GLI2P10070 1586 aa27.18■■□□□ 1.94
AP3D1-211ENST00000591650 TTC37Q6PGP7 1564 aa27.18■■□□□ 1.94
AP3D1-211ENST00000591650 CDK11AQ9UQ88 783 aaPredicted RBP27.18■■□□□ 1.94
AP3D1-211ENST00000591650 FAM69CQ0P6D2 419 aa27.17■■□□□ 1.94
AP3D1-211ENST00000591650 ABCA9Q8IUA7 1624 aa27.17■■□□□ 1.94
AP3D1-211ENST00000591650 MTUS2Q5JR59 1369 aa27.16■■□□□ 1.94
AP3D1-211ENST00000591650 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.15■■□□□ 1.94
AP3D1-211ENST00000591650 KCNH8Q96L42 1107 aa27.15■■□□□ 1.94
AP3D1-211ENST00000591650 MAP3K4Q9Y6R4 1608 aa27.14■■□□□ 1.94
AP3D1-211ENST00000591650 SUPT6HQ7KZ85 1726 aaKnown RBP27.13■■□□□ 1.93
AP3D1-211ENST00000591650 APLP2Q06481 763 aa27.13■■□□□ 1.93
AP3D1-211ENST00000591650 KANK4Q5T7N3 995 aaPredicted RBP27.12■■□□□ 1.93
AP3D1-211ENST00000591650 TSPOAP1O95153 1857 aa27.08■■□□□ 1.93
AP3D1-211ENST00000591650 MYO5CQ9NQX4 1742 aa27.07■■□□□ 1.92
AP3D1-211ENST00000591650 PPRC1Q5VV67 1664 aaKnown RBP27.07■■□□□ 1.92
AP3D1-211ENST00000591650 CDC42BPAQ5VT25 1732 aa27.05■■□□□ 1.92
AP3D1-211ENST00000591650 NCOA2Q15596 1464 aa27.05■■□□□ 1.92
AP3D1-211ENST00000591650 PREX2Q70Z35 1606 aa27.03■■□□□ 1.92
AP3D1-211ENST00000591650 CDC42BPBQ9Y5S2 1711 aa27■■□□□ 1.91
AP3D1-211ENST00000591650 ITSN2Q9NZM3 1697 aa26.99■■□□□ 1.91
AP3D1-211ENST00000591650 CD109Q6YHK3 1445 aa26.98■■□□□ 1.91
AP3D1-211ENST00000591650 PPARGC1BQ86YN6 1023 aaKnown RBP26.96■■□□□ 1.91
AP3D1-211ENST00000591650 ARAP3Q8WWN8 1544 aa26.94■■□□□ 1.9
AP3D1-211ENST00000591650 GPATCH8Q9UKJ3 1502 aaKnown RBP26.93■■□□□ 1.9
AP3D1-211ENST00000591650 CCNB3Q8WWL7 1395 aa26.91■■□□□ 1.9
AP3D1-211ENST00000591650 PLCH2O75038 1416 aa26.91■■□□□ 1.9
AP3D1-211ENST00000591650 ARHGAP5Q13017 1502 aa26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms