RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 NISCHQ9Y2I1 1504 aa41.3■■■■■ 4.2
AP3D1-211ENST00000591650 CCDC180Q9P1Z9 1646 aa36.58■■■■□ 3.45
AP3D1-211ENST00000591650 ABCC9O60706 1549 aa35.22■■■■□ 3.23
AP3D1-211ENST00000591650 ZCCHC6Q5VYS8 1495 aaKnown RBP34.56■■■■□ 3.12
AP3D1-211ENST00000591650 DCAF1Q9Y4B6 1507 aa34.19■■■■□ 3.06
AP3D1-211ENST00000591650 NACADO15069 1562 aa34.17■■■■□ 3.06
AP3D1-211ENST00000591650 DCAF8L2P0C7V8 631 aa34.14■■■■□ 3.06
AP3D1-211ENST00000591650 MYO15BQ96JP2 1530 aa34.11■■■■□ 3.05
AP3D1-211ENST00000591650 RB1CC1Q8TDY2 1594 aa34.1■■■■□ 3.05
AP3D1-211ENST00000591650 UNC13AQ9UPW8 1703 aa33.5■■■□□ 2.95
AP3D1-211ENST00000591650 SCRIBQ14160 1630 aa33.44■■■□□ 2.94
AP3D1-211ENST00000591650 BICRAQ9NZM4 1560 aa33.12■■■□□ 2.89
AP3D1-211ENST00000591650 PABPN1Q86U42 306 aaKnown RBP eCLIP33.02■■■□□ 2.882e-7■■■□□ 17.5
AP3D1-211ENST00000591650 SHROOM4Q9ULL8 1493 aa32.95■■■□□ 2.86
AP3D1-211ENST00000591650 EIF4G1Q04637 1599 aaKnown RBP32.17■■■□□ 2.74
AP3D1-211ENST00000591650 CECR2Q9BXF3 1484 aa32.14■■■□□ 2.73
AP3D1-211ENST00000591650 DNAJC5BQ9UF47 199 aa32.12■■■□□ 2.73
AP3D1-211ENST00000591650 SMARCA4P51532 1647 aa32.01■■■□□ 2.71
AP3D1-211ENST00000591650 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
AP3D1-211ENST00000591650 CC2D2AQ9P2K1 1620 aa31.91■■■□□ 2.7
AP3D1-211ENST00000591650 MROH2BQ7Z745 1585 aa31.88■■■□□ 2.69
AP3D1-211ENST00000591650 PEG3Q9GZU2 1588 aa31.65■■■□□ 2.66
AP3D1-211ENST00000591650 RSF1Q96T23 1441 aaPredicted RBP31.65■■■□□ 2.66
AP3D1-211ENST00000591650 ATAD2BQ9ULI0 1458 aa31.62■■■□□ 2.65
AP3D1-211ENST00000591650 SMARCA2P51531 1590 aa31.62■■■□□ 2.65
AP3D1-211ENST00000591650 WIZO95785 1651 aa31.61■■■□□ 2.65
AP3D1-211ENST00000591650 NCAPD3P42695 1498 aa31.48■■■□□ 2.63
AP3D1-211ENST00000591650 HMGXB3Q12766 1538 aa31.46■■■□□ 2.63
AP3D1-211ENST00000591650 BAZ1BQ9UIG0 1483 aaKnown RBP31.4■■■□□ 2.62
AP3D1-211ENST00000591650 TOP2AP11388 1531 aaKnown RBP31.27■■■□□ 2.6
AP3D1-211ENST00000591650 SUPT5HO00267 1087 aaKnown RBP31.16■■■□□ 2.58
AP3D1-211ENST00000591650 CCDC88BA6NC98 1476 aa30.84■■■□□ 2.53
AP3D1-211ENST00000591650 NESP48681 1621 aa30.66■■■□□ 2.5
AP3D1-211ENST00000591650 LAMC3Q9Y6N6 1575 aa30.63■■■□□ 2.49
AP3D1-211ENST00000591650 CADPSQ9ULU8 1353 aa30.57■■■□□ 2.48
AP3D1-211ENST00000591650 CFTRP13569 1480 aa30.54■■■□□ 2.48
AP3D1-211ENST00000591650 PRDM2Q13029 1718 aa30.54■■■□□ 2.48
AP3D1-211ENST00000591650 KIF21AQ7Z4S6 1674 aa30.4■■■□□ 2.46
AP3D1-211ENST00000591650 PDS5BQ9NTI5 1447 aa30.32■■■□□ 2.44
AP3D1-211ENST00000591650 ERCC6Q03468 1493 aa30.28■■■□□ 2.44
AP3D1-211ENST00000591650 FANCD2Q9BXW9 1451 aa30.28■■■□□ 2.44
AP3D1-211ENST00000591650 CEP164Q9UPV0 1460 aa30.21■■■□□ 2.43
AP3D1-211ENST00000591650 THOC2Q8NI27 1593 aaKnown RBP30.15■■■□□ 2.42
AP3D1-211ENST00000591650 MRC2Q9UBG0 1479 aa30.06■■■□□ 2.4
AP3D1-211ENST00000591650 URB2Q14146 1524 aaKnown RBP30■■■□□ 2.39
AP3D1-211ENST00000591650 WDR62O43379 1518 aa29.98■■■□□ 2.39
AP3D1-211ENST00000591650 ABCC8Q09428 1581 aa29.96■■■□□ 2.39
AP3D1-211ENST00000591650 DNMBPQ6XZF7 1577 aa29.92■■■□□ 2.38
AP3D1-211ENST00000591650 CUX1P39880 1505 aa29.89■■■□□ 2.38
AP3D1-211ENST00000591650 TOPBP1Q92547 1522 aa29.88■■■□□ 2.37
AP3D1-211ENST00000591650 SYNJ1O43426 1573 aa29.83■■■□□ 2.37
AP3D1-211ENST00000591650 CUX2O14529 1486 aa29.82■■■□□ 2.36
AP3D1-211ENST00000591650 WRNQ14191 1432 aaPredicted RBP eCLIP29.81■■■□□ 2.36
AP3D1-211ENST00000591650 BIVM-ERCC5R4GMW8 1640 aa29.8■■■□□ 2.36
AP3D1-211ENST00000591650 TOP2BQ02880 1626 aa29.77■■■□□ 2.36
AP3D1-211ENST00000591650 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
AP3D1-211ENST00000591650 POLA1P09884 1462 aaPredicted RBP29.67■■■□□ 2.34
AP3D1-211ENST00000591650 TARBP1Q13395 1621 aaKnown RBP29.56■■■□□ 2.32
AP3D1-211ENST00000591650 WDR97A6NE52 1622 aa29.53■■■□□ 2.32
AP3D1-211ENST00000591650 RAD54L2Q9Y4B4 1467 aa29.53■■■□□ 2.32
AP3D1-211ENST00000591650 IFT140Q96RY7 1462 aa29.51■■■□□ 2.32
AP3D1-211ENST00000591650 SOGA1O94964 1423 aa29.46■■■□□ 2.31
AP3D1-211ENST00000591650 ZNF608Q9ULD9 1512 aaPredicted RBP29.4■■■□□ 2.3
AP3D1-211ENST00000591650 CHIC1Q5VXU3 224 aa29.39■■■□□ 2.3
AP3D1-211ENST00000591650 ABCA10Q8WWZ4 1543 aa29.39■■■□□ 2.3
AP3D1-211ENST00000591650 EIF4G3O43432 1585 aaKnown RBP29.38■■■□□ 2.29
AP3D1-211ENST00000591650 TRIM41Q8WV44 630 aa29.37■■■□□ 2.29
AP3D1-211ENST00000591650 ABCA5Q8WWZ7 1642 aa29.32■■■□□ 2.28
AP3D1-211ENST00000591650 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.27
AP3D1-211ENST00000591650 AQRO60306 1485 aaKnown RBP eCLIP29.25■■■□□ 2.271e-6■■■■□ 26.1
AP3D1-211ENST00000591650 PBRM1Q86U86 1689 aa29.25■■■□□ 2.27
AP3D1-211ENST00000591650 GAPVD1Q14C86 1478 aa29.18■■■□□ 2.26
AP3D1-211ENST00000591650 KIF27Q86VH2 1401 aa29.12■■■□□ 2.25
AP3D1-211ENST00000591650 RUSC2Q8N2Y8 1516 aa29.1■■■□□ 2.25
AP3D1-211ENST00000591650 GRIN2BQ13224 1484 aa29.1■■■□□ 2.25
AP3D1-211ENST00000591650 ERICH3Q5RHP9 1530 aa29.05■■■□□ 2.24
AP3D1-211ENST00000591650 SNAPC4Q5SXM2 1469 aa29.04■■■□□ 2.24
AP3D1-211ENST00000591650 ADAMTS12P58397 1594 aa29.01■■■□□ 2.23
AP3D1-211ENST00000591650 MAGI1Q96QZ7 1491 aaPredicted RBP28.98■■■□□ 2.23
AP3D1-211ENST00000591650 CUL7Q14999 1698 aa28.95■■■□□ 2.22
AP3D1-211ENST00000591650 CHD1O14646 1710 aa28.94■■■□□ 2.22
AP3D1-211ENST00000591650 IGF1RP08069 1367 aa28.91■■■□□ 2.22
AP3D1-211ENST00000591650 EEA1Q15075 1411 aa28.9■■■□□ 2.22
AP3D1-211ENST00000591650 SYNJ2O15056 1496 aa28.86■■■□□ 2.21
AP3D1-211ENST00000591650 FHAD1B1AJZ9 1412 aa28.84■■■□□ 2.21
AP3D1-211ENST00000591650 FAM9AQ8IZU1 332 aaPredicted RBP28.8■■■□□ 2.2
AP3D1-211ENST00000591650 FBLN2P98095 1184 aa28.77■■■□□ 2.2
AP3D1-211ENST00000591650 GRIN2AQ12879 1464 aa28.76■■■□□ 2.2
AP3D1-211ENST00000591650 CARMIL1Q5VZK9 1371 aa28.76■■■□□ 2.19
AP3D1-211ENST00000591650 PRXQ9BXM0 1461 aa28.73■■■□□ 2.19
AP3D1-211ENST00000591650 CHMP7Q8WUX9 453 aaPredicted RBP28.72■■■□□ 2.19
AP3D1-211ENST00000591650 CSRNP3Q8WYN3 585 aa28.72■■■□□ 2.19
AP3D1-211ENST00000591650 RAPGEF2Q9Y4G8 1499 aa28.69■■■□□ 2.18
AP3D1-211ENST00000591650 OSCARQ8IYS5 282 aa28.69■■■□□ 2.18
AP3D1-211ENST00000591650 KIF21BO75037 1637 aa28.68■■■□□ 2.18
AP3D1-211ENST00000591650 CEP170Q5SW79 1584 aa28.65■■■□□ 2.18
AP3D1-211ENST00000591650 NUP160Q12769 1436 aa28.6■■■□□ 2.17
AP3D1-211ENST00000591650 DNAJC5Q9H3Z4 198 aa28.58■■■□□ 2.17
AP3D1-211ENST00000591650 CLASP1Q7Z460 1538 aa28.57■■■□□ 2.16
AP3D1-211ENST00000591650 CTTNBP2Q8WZ74 1663 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms