RNA–Protein interactions for RNA: ENST00000591051.1

NPC1-210, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 3,171 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-210ENST00000591051 RAPGEF2Q9Y4G8 1499 aa13.82□□□□□ -0.2
NPC1-210ENST00000591051 NEUROD1Q13562 356 aa13.81□□□□□ -0.2
NPC1-210ENST00000591051 ADAMTS12P58397 1594 aa13.79□□□□□ -0.2
NPC1-210ENST00000591051 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
NPC1-210ENST00000591051 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
NPC1-210ENST00000591051 CUL7Q14999 1698 aa13.78□□□□□ -0.2
NPC1-210ENST00000591051 UBTFP17480 764 aaKnown RBP13.77□□□□□ -0.2
NPC1-210ENST00000591051 MAGI1Q96QZ7 1491 aaPredicted RBP13.77□□□□□ -0.2
NPC1-210ENST00000591051 GOLGA3Q08378 1498 aa13.76□□□□□ -0.21
NPC1-210ENST00000591051 KIF21BO75037 1637 aa13.76□□□□□ -0.21
NPC1-210ENST00000591051 MYT1Q01538 1121 aa13.75□□□□□ -0.21
NPC1-210ENST00000591051 SYNJ2O15056 1496 aa13.74□□□□□ -0.21
NPC1-210ENST00000591051 RANGAP1P46060 587 aaPredicted RBP13.74□□□□□ -0.21
NPC1-210ENST00000591051 ZNF316A6NFI3 1004 aaPredicted RBP13.73□□□□□ -0.21
NPC1-210ENST00000591051 GRIN2AQ12879 1464 aa13.72□□□□□ -0.21
NPC1-210ENST00000591051 CHD1O14646 1710 aa13.71□□□□□ -0.21
NPC1-210ENST00000591051 GTF3C3Q9Y5Q9 886 aa13.71□□□□□ -0.22
NPC1-210ENST00000591051 CEP170Q5SW79 1584 aa13.66□□□□□ -0.22
NPC1-210ENST00000591051 NUP160Q12769 1436 aa13.62□□□□□ -0.23
NPC1-210ENST00000591051 CTTNBP2Q8WZ74 1663 aa13.6□□□□□ -0.23
NPC1-210ENST00000591051 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
NPC1-210ENST00000591051 P3H3Q8IVL6 736 aa13.59□□□□□ -0.23
NPC1-210ENST00000591051 TTBK1Q5TCY1 1321 aaPredicted RBP13.58□□□□□ -0.24
NPC1-210ENST00000591051 KIAA0586Q9BVV6 1533 aa13.58□□□□□ -0.24
NPC1-210ENST00000591051 VPS8Q8N3P4 1428 aa13.58□□□□□ -0.24
NPC1-210ENST00000591051 CLIP1P30622 1438 aa13.57□□□□□ -0.24
NPC1-210ENST00000591051 IQGAP2Q13576 1575 aa13.56□□□□□ -0.24
NPC1-210ENST00000591051 JPH4Q96JJ6 628 aa13.56□□□□□ -0.24
NPC1-210ENST00000591051 CLSPNQ9HAW4 1339 aa13.53□□□□□ -0.24
NPC1-210ENST00000591051 CLASP1Q7Z460 1538 aa13.53□□□□□ -0.24
NPC1-210ENST00000591051 ARHGAP35Q9NRY4 1499 aa13.51□□□□□ -0.25
NPC1-210ENST00000591051 APLP2Q06481 763 aa13.51□□□□□ -0.25
NPC1-210ENST00000591051 ERCC6L2Q5T890 1561 aa13.49□□□□□ -0.25
NPC1-210ENST00000591051 PRG4Q92954 1404 aaPredicted RBP13.49□□□□□ -0.25
NPC1-210ENST00000591051 FHOD3Q2V2M9 1422 aa13.48□□□□□ -0.25
NPC1-210ENST00000591051 UGGT2Q9NYU1 1516 aa13.48□□□□□ -0.25
NPC1-210ENST00000591051 DISP1Q96F81 1524 aa13.48□□□□□ -0.25
NPC1-210ENST00000591051 MIER1Q8N108 512 aa13.48□□□□□ -0.25
NPC1-210ENST00000591051 HNRNPUL2Q1KMD3 747 aaKnown RBP13.47□□□□□ -0.25
NPC1-210ENST00000591051 ARAP1Q96P48 1450 aa13.47□□□□□ -0.25
NPC1-210ENST00000591051 SHROOM2Q13796 1616 aa13.45□□□□□ -0.26
NPC1-210ENST00000591051 SAMD9Q5K651 1589 aa13.45□□□□□ -0.26
NPC1-210ENST00000591051 KIAA0556O60303 1618 aa13.44□□□□□ -0.26
NPC1-210ENST00000591051 EFCAB5A4FU69 1503 aa13.42□□□□□ -0.26
NPC1-210ENST00000591051 CARMIL2Q6F5E8 1435 aa13.42□□□□□ -0.26
NPC1-210ENST00000591051 YTHDC1Q96MU7 727 aaKnown RBP13.4□□□□□ -0.26
NPC1-210ENST00000591051 ATP1B4Q9UN42 357 aaPredicted RBP13.39□□□□□ -0.27
NPC1-210ENST00000591051 ARID3CA6NKF2 412 aa13.37□□□□□ -0.27
NPC1-210ENST00000591051 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
NPC1-210ENST00000591051 PTPRGP23470 1445 aa13.36□□□□□ -0.27
NPC1-210ENST00000591051 DHX57Q6P158 1386 aaKnown RBP13.35□□□□□ -0.27
NPC1-210ENST00000591051 PLB1Q6P1J6 1458 aa13.34□□□□□ -0.27
NPC1-210ENST00000591051 RIMBP3CA6NJZ7 1639 aa13.32□□□□□ -0.28
NPC1-210ENST00000591051 RIMBP3BA6NNM3 1639 aa13.32□□□□□ -0.28
NPC1-210ENST00000591051 RIMBP3Q9UFD9 1639 aa13.32□□□□□ -0.28
NPC1-210ENST00000591051 FMN1Q68DA7 1419 aa13.32□□□□□ -0.28
NPC1-210ENST00000591051 RRBP1Q9P2E9 1410 aaKnown RBP13.32□□□□□ -0.28
NPC1-210ENST00000591051 PCF11O94913 1555 aaKnown RBP13.32□□□□□ -0.28
NPC1-210ENST00000591051 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
NPC1-210ENST00000591051 CASKIN1Q8WXD9 1431 aa13.28□□□□□ -0.28
NPC1-210ENST00000591051 RAPGEF6Q8TEU7 1601 aa13.26□□□□□ -0.29
NPC1-210ENST00000591051 ABCA8O94911 1581 aa13.26□□□□□ -0.29
NPC1-210ENST00000591051 UACAQ9BZF9 1416 aa13.26□□□□□ -0.29
NPC1-210ENST00000591051 DNAJC5Q9H3Z4 198 aa13.26□□□□□ -0.29
NPC1-210ENST00000591051 NUP153P49790 1475 aaKnown RBP13.25□□□□□ -0.29
NPC1-210ENST00000591051 LRRIQ1Q96JM4 1722 aa13.25□□□□□ -0.29
NPC1-210ENST00000591051 FYCO1Q9BQS8 1478 aa13.24□□□□□ -0.29
NPC1-210ENST00000591051 CDK13Q14004 1512 aaKnown RBP13.24□□□□□ -0.29
NPC1-210ENST00000591051 KANK4Q5T7N3 995 aaPredicted RBP13.24□□□□□ -0.29
NPC1-210ENST00000591051 EPRSP07814 1512 aaKnown RBP13.21□□□□□ -0.29
NPC1-210ENST00000591051 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.29
NPC1-210ENST00000591051 CCNB3Q8WWL7 1395 aa13.21□□□□□ -0.29
NPC1-210ENST00000591051 ABCC2Q92887 1545 aa13.21□□□□□ -0.29
NPC1-210ENST00000591051 HECW1Q76N89 1606 aa13.21□□□□□ -0.29
NPC1-210ENST00000591051 MAP3K1Q13233 1512 aa13.21□□□□□ -0.3
NPC1-210ENST00000591051 ATP10BO94823 1461 aa13.2□□□□□ -0.3
NPC1-210ENST00000591051 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
NPC1-210ENST00000591051 UHRF1BP1LA0JNW5 1464 aa13.17□□□□□ -0.3
NPC1-210ENST00000591051 TIAM1Q13009 1591 aa13.17□□□□□ -0.3
NPC1-210ENST00000591051 MAGI3Q5TCQ9 1506 aa13.16□□□□□ -0.3
NPC1-210ENST00000591051 CCDC18Q5T9S5 1454 aa13.15□□□□□ -0.31
NPC1-210ENST00000591051 ZCCHC11Q5TAX3 1644 aaKnown RBP13.15□□□□□ -0.31
NPC1-210ENST00000591051 KDM5BQ9UGL1 1544 aa13.14□□□□□ -0.31
NPC1-210ENST00000591051 CFAP43Q8NDM7 1665 aa13.14□□□□□ -0.31
NPC1-210ENST00000591051 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
NPC1-210ENST00000591051 MTUS2Q5JR59 1369 aa13.13□□□□□ -0.31
NPC1-210ENST00000591051 LRRC9Q6ZRR7 1453 aa13.13□□□□□ -0.31
NPC1-210ENST00000591051 KCNH8Q96L42 1107 aa13.12□□□□□ -0.31
NPC1-210ENST00000591051 PLEKHD1A6NEE1 506 aa13.12□□□□□ -0.31
NPC1-210ENST00000591051 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
NPC1-210ENST00000591051 CDK11AQ9UQ88 783 aaPredicted RBP13.1□□□□□ -0.31
NPC1-210ENST00000591051 RAB3GAP2Q9H2M9 1393 aa13.09□□□□□ -0.31
NPC1-210ENST00000591051 MAPKBP1O60336 1514 aa13.08□□□□□ -0.31
NPC1-210ENST00000591051 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
NPC1-210ENST00000591051 ASXL2Q76L83 1435 aa13.08□□□□□ -0.32
NPC1-210ENST00000591051 TROQ12816 1431 aaPredicted RBP13.07□□□□□ -0.32
NPC1-210ENST00000591051 KIF14Q15058 1648 aa13.06□□□□□ -0.32
NPC1-210ENST00000591051 EHBP1L1Q8N3D4 1523 aa13.05□□□□□ -0.32
NPC1-210ENST00000591051 NCOA2Q15596 1464 aa13.04□□□□□ -0.32
NPC1-210ENST00000591051 WDR7Q9Y4E6 1490 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms