RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 IGF1RP08069 1367 aa20.65■□□□□ 0.9
MBD1-218ENST00000589541 CUL7Q14999 1698 aa20.57■□□□□ 0.88
MBD1-218ENST00000589541 KIAA0586Q9BVV6 1533 aa20.57■□□□□ 0.88
MBD1-218ENST00000589541 CARMIL1Q5VZK9 1371 aa20.51■□□□□ 0.87
MBD1-218ENST00000589541 NPM1P06748 294 aaKnown RBP eCLIP20.51■□□□□ 0.87
MBD1-218ENST00000589541 KIF13AQ9H1H9 1805 aa20.48■□□□□ 0.87
MBD1-218ENST00000589541 ADCY10Q96PN6 1610 aa20.47■□□□□ 0.87
MBD1-218ENST00000589541 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
MBD1-218ENST00000589541 FAM69CQ0P6D2 419 aa20.46■□□□□ 0.87
MBD1-218ENST00000589541 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
MBD1-218ENST00000589541 MAPKBP1O60336 1514 aa20.43■□□□□ 0.86
MBD1-218ENST00000589541 TTBK1Q5TCY1 1321 aaPredicted RBP20.43■□□□□ 0.86
MBD1-218ENST00000589541 PTPRGP23470 1445 aa20.41■□□□□ 0.86
MBD1-218ENST00000589541 CARMIL2Q6F5E8 1435 aa20.38■□□□□ 0.85
MBD1-218ENST00000589541 IQGAP2Q13576 1575 aa20.37■□□□□ 0.85
MBD1-218ENST00000589541 DIP2BQ9P265 1576 aa20.37■□□□□ 0.85
MBD1-218ENST00000589541 TNIKQ9UKE5 1360 aa20.35■□□□□ 0.85
MBD1-218ENST00000589541 RAPGEF2Q9Y4G8 1499 aa20.31■□□□□ 0.84
MBD1-218ENST00000589541 ABCC2Q92887 1545 aa20.28■□□□□ 0.84
MBD1-218ENST00000589541 DISP1Q96F81 1524 aa20.28■□□□□ 0.84
MBD1-218ENST00000589541 UACAQ9BZF9 1416 aa20.24■□□□□ 0.83
MBD1-218ENST00000589541 ASXL2Q76L83 1435 aa20.23■□□□□ 0.83
MBD1-218ENST00000589541 UHRF1BP1LA0JNW5 1464 aa20.23■□□□□ 0.83
MBD1-218ENST00000589541 UGGT2Q9NYU1 1516 aa20.22■□□□□ 0.83
MBD1-218ENST00000589541 TSPOAP1O95153 1857 aa20.22■□□□□ 0.83
MBD1-218ENST00000589541 KDM6BO15054 1643 aa20.2■□□□□ 0.82
MBD1-218ENST00000589541 PLB1Q6P1J6 1458 aa20.2■□□□□ 0.82
MBD1-218ENST00000589541 KIAA0556O60303 1618 aa20.17■□□□□ 0.82
MBD1-218ENST00000589541 KDM5BQ9UGL1 1544 aa20.14■□□□□ 0.81
MBD1-218ENST00000589541 GLI2P10070 1586 aa20.12■□□□□ 0.81
MBD1-218ENST00000589541 CTTNBP2Q8WZ74 1663 aa20.1■□□□□ 0.81
MBD1-218ENST00000589541 PRXQ9BXM0 1461 aa20.1■□□□□ 0.81
MBD1-218ENST00000589541 ZCCHC11Q5TAX3 1644 aaKnown RBP20.09■□□□□ 0.81
MBD1-218ENST00000589541 EPRSP07814 1512 aaKnown RBP20.09■□□□□ 0.81
MBD1-218ENST00000589541 GOLGA3Q08378 1498 aa20.08■□□□□ 0.81
MBD1-218ENST00000589541 PPRC1Q5VV67 1664 aaKnown RBP20.07■□□□□ 0.8
MBD1-218ENST00000589541 KDM4FA0A1W2PPD8 638 aa20.04■□□□□ 0.8
MBD1-218ENST00000589541 MAP3K4Q9Y6R4 1608 aa20.02■□□□□ 0.8
MBD1-218ENST00000589541 WDR7Q9Y4E6 1490 aa20.02■□□□□ 0.8
MBD1-218ENST00000589541 TEX14Q8IWB6 1497 aa19.99■□□□□ 0.79
MBD1-218ENST00000589541 ABCA8O94911 1581 aa19.99■□□□□ 0.79
MBD1-218ENST00000589541 COL17A1Q9UMD9 1497 aaPredicted RBP19.99■□□□□ 0.79
MBD1-218ENST00000589541 P3H3Q8IVL6 736 aa19.96■□□□□ 0.79
MBD1-218ENST00000589541 CSRNP3Q8WYN3 585 aa19.96■□□□□ 0.79
MBD1-218ENST00000589541 KCNH8Q96L42 1107 aa19.96■□□□□ 0.79
MBD1-218ENST00000589541 ARID3CA6NKF2 412 aa19.93■□□□□ 0.78
MBD1-218ENST00000589541 FAM9AQ8IZU1 332 aaPredicted RBP19.92■□□□□ 0.78
MBD1-218ENST00000589541 CD109Q6YHK3 1445 aa19.91■□□□□ 0.78
MBD1-218ENST00000589541 ADGRL1O94910 1474 aa19.87■□□□□ 0.77
MBD1-218ENST00000589541 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
MBD1-218ENST00000589541 CFAP43Q8NDM7 1665 aa19.85■□□□□ 0.77
MBD1-218ENST00000589541 ATP10BO94823 1461 aa19.85■□□□□ 0.77
MBD1-218ENST00000589541 RANGAP1P46060 587 aaPredicted RBP19.84■□□□□ 0.77
MBD1-218ENST00000589541 EEA1Q15075 1411 aa19.84■□□□□ 0.77
MBD1-218ENST00000589541 SAMD9Q5K651 1589 aa19.83■□□□□ 0.77
MBD1-218ENST00000589541 RAPGEF6Q8TEU7 1601 aa19.77■□□□□ 0.76
MBD1-218ENST00000589541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.77■□□□□ 0.76
MBD1-218ENST00000589541 HNRNPUL2Q1KMD3 747 aaKnown RBP19.77■□□□□ 0.76
MBD1-218ENST00000589541 FHOD3Q2V2M9 1422 aa19.75■□□□□ 0.75
MBD1-218ENST00000589541 NUP153P49790 1475 aaKnown RBP19.73■□□□□ 0.75
MBD1-218ENST00000589541 ABCA9Q8IUA7 1624 aa19.72■□□□□ 0.75
MBD1-218ENST00000589541 ARAP3Q8WWN8 1544 aa19.71■□□□□ 0.75
MBD1-218ENST00000589541 KIF21BO75037 1637 aa19.67■□□□□ 0.74
MBD1-218ENST00000589541 PHLDB1Q86UU1 1377 aa19.67■□□□□ 0.74
MBD1-218ENST00000589541 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
MBD1-218ENST00000589541 RAPGEF3O95398 923 aa19.65■□□□□ 0.74
MBD1-218ENST00000589541 PLEKHD1A6NEE1 506 aa19.64■□□□□ 0.73
MBD1-218ENST00000589541 NEO1Q92859 1461 aa19.64■□□□□ 0.73
MBD1-218ENST00000589541 EFCAB5A4FU69 1503 aa19.64■□□□□ 0.73
MBD1-218ENST00000589541 UBTFP17480 764 aaKnown RBP19.6■□□□□ 0.73
MBD1-218ENST00000589541 HECW2Q9P2P5 1572 aa19.6■□□□□ 0.73
MBD1-218ENST00000589541 CHIC1Q5VXU3 224 aa19.58■□□□□ 0.72
MBD1-218ENST00000589541 FRMPD1Q5SYB0 1578 aa19.55■□□□□ 0.72
MBD1-218ENST00000589541 CDK13Q14004 1512 aaKnown RBP19.55■□□□□ 0.72
MBD1-218ENST00000589541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.54■□□□□ 0.72
MBD1-218ENST00000589541 FANCAO15360 1455 aa19.53■□□□□ 0.72
MBD1-218ENST00000589541 ATP1B4Q9UN42 357 aaPredicted RBP19.52■□□□□ 0.72
MBD1-218ENST00000589541 ARID4BQ4LE39 1312 aaPredicted RBP19.51■□□□□ 0.71
MBD1-218ENST00000589541 AKNAQ7Z591 1439 aa19.51■□□□□ 0.71
MBD1-218ENST00000589541 DENND4BO75064 1496 aaPredicted RBP19.51■□□□□ 0.71
MBD1-218ENST00000589541 TTC37Q6PGP7 1564 aa19.51■□□□□ 0.71
MBD1-218ENST00000589541 FMN1Q68DA7 1419 aa19.49■□□□□ 0.71
MBD1-218ENST00000589541 ARHGAP35Q9NRY4 1499 aa19.48■□□□□ 0.71
MBD1-218ENST00000589541 CFAP74Q9C0B2 1584 aa19.48■□□□□ 0.71
MBD1-218ENST00000589541 ADAMTSL3P82987 1691 aa19.47■□□□□ 0.71
MBD1-218ENST00000589541 ILDR1Q86SU0 546 aaPredicted RBP19.47■□□□□ 0.71
MBD1-218ENST00000589541 PTPRMP28827 1452 aa19.47■□□□□ 0.71
MBD1-218ENST00000589541 ARHGEF40Q8TER5 1519 aa19.46■□□□□ 0.71
MBD1-218ENST00000589541 RICTORQ6R327 1708 aa19.45■□□□□ 0.7
MBD1-218ENST00000589541 HECW1Q76N89 1606 aa19.45■□□□□ 0.7
MBD1-218ENST00000589541 BCORL1Q5H9F3 1711 aa19.42■□□□□ 0.7
MBD1-218ENST00000589541 PLCH2O75038 1416 aa19.42■□□□□ 0.7
MBD1-218ENST00000589541 CDK11AQ9UQ88 783 aaPredicted RBP19.41■□□□□ 0.7
MBD1-218ENST00000589541 MADDQ8WXG6 1647 aa19.4■□□□□ 0.7
MBD1-218ENST00000589541 ZMYM4Q5VZL5 1548 aa19.4■□□□□ 0.7
MBD1-218ENST00000589541 SCAPERQ9BY12 1400 aa19.39■□□□□ 0.69
MBD1-218ENST00000589541 YEATS2Q9ULM3 1422 aa19.39■□□□□ 0.69
MBD1-218ENST00000589541 ZFYVE16Q7Z3T8 1539 aa19.39■□□□□ 0.69
MBD1-218ENST00000589541 POGZQ7Z3K3 1410 aa19.37■□□□□ 0.69
MBD1-218ENST00000589541 EFCAB2Q5VUJ9 269 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms