RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 CSRNP3Q8WYN3 585 aa37.26■■■■□ 3.56
R3HDM4-205ENST00000589445 PRXQ9BXM0 1461 aa37.26■■■■□ 3.55
R3HDM4-205ENST00000589445 CYB5RLQ6IPT4 315 aa37.2■■■■□ 3.55
R3HDM4-205ENST00000589445 KIF21BO75037 1637 aa37.19■■■■□ 3.54
R3HDM4-205ENST00000589445 CTTNBP2Q8WZ74 1663 aa37.18■■■■□ 3.54
R3HDM4-205ENST00000589445 TRHP20396 242 aaPredicted RBP37.14■■■■□ 3.54
R3HDM4-205ENST00000589445 SHROOM2Q13796 1616 aa37.06■■■■□ 3.52
R3HDM4-205ENST00000589445 IQGAP2Q13576 1575 aa37.05■■■■□ 3.52
R3HDM4-205ENST00000589445 KIAA0586Q9BVV6 1533 aa37.04■■■■□ 3.52
R3HDM4-205ENST00000589445 ARAP1Q96P48 1450 aa37.01■■■■□ 3.51
R3HDM4-205ENST00000589445 GOLGA3Q08378 1498 aa36.96■■■■□ 3.51
R3HDM4-205ENST00000589445 EHMT2Q96KQ7 1210 aa36.96■■■■□ 3.51
R3HDM4-205ENST00000589445 ERCC6L2Q5T890 1561 aa36.88■■■■□ 3.49
R3HDM4-205ENST00000589445 PRG4Q92954 1404 aaPredicted RBP36.83■■■■□ 3.49
R3HDM4-205ENST00000589445 AEBP2Q6ZN18 517 aaPredicted RBP36.82■■■■□ 3.48
R3HDM4-205ENST00000589445 JPH4Q96JJ6 628 aa36.8■■■■□ 3.48
R3HDM4-205ENST00000589445 UGGT2Q9NYU1 1516 aa36.77■■■■□ 3.48
R3HDM4-205ENST00000589445 UBTFP17480 764 aaKnown RBP36.72■■■■□ 3.47
R3HDM4-205ENST00000589445 KIAA0556O60303 1618 aa36.7■■■■□ 3.47
R3HDM4-205ENST00000589445 CARMIL2Q6F5E8 1435 aa36.67■■■■□ 3.46
R3HDM4-205ENST00000589445 DISP1Q96F81 1524 aa36.64■■■■□ 3.46
R3HDM4-205ENST00000589445 SAMD9Q5K651 1589 aa36.59■■■■□ 3.45
R3HDM4-205ENST00000589445 RANGAP1P46060 587 aaPredicted RBP36.59■■■■□ 3.45
R3HDM4-205ENST00000589445 EFCAB5A4FU69 1503 aa36.51■■■■□ 3.44
R3HDM4-205ENST00000589445 TTBK1Q5TCY1 1321 aaPredicted RBP36.49■■■■□ 3.43
R3HDM4-205ENST00000589445 TNIKQ9UKE5 1360 aa36.48■■■■□ 3.43
R3HDM4-205ENST00000589445 PTPRGP23470 1445 aa36.4■■■■□ 3.42
R3HDM4-205ENST00000589445 P3H3Q8IVL6 736 aa36.39■■■■□ 3.42
R3HDM4-205ENST00000589445 FHOD3Q2V2M9 1422 aa36.36■■■■□ 3.41
R3HDM4-205ENST00000589445 LOC105371045A0A1W2PR82 267 aa36.36■■■■□ 3.41
R3HDM4-205ENST00000589445 ADCY10Q96PN6 1610 aa36.33■■■■□ 3.41
R3HDM4-205ENST00000589445 ARHGAP35Q9NRY4 1499 aa36.32■■■■□ 3.41
R3HDM4-205ENST00000589445 CLIP1P30622 1438 aa36.27■■■■□ 3.4
R3HDM4-205ENST00000589445 CEP162Q5TB80 1403 aa36.25■■■■□ 3.39
R3HDM4-205ENST00000589445 ABCC2Q92887 1545 aa36.22■■■■□ 3.39
R3HDM4-205ENST00000589445 PLB1Q6P1J6 1458 aa36.21■■■■□ 3.39
R3HDM4-205ENST00000589445 ABCA8O94911 1581 aa36.2■■■■□ 3.39
R3HDM4-205ENST00000589445 UACAQ9BZF9 1416 aa36.19■■■■□ 3.38
R3HDM4-205ENST00000589445 RAPGEF6Q8TEU7 1601 aa36.19■■■■□ 3.38
R3HDM4-205ENST00000589445 UHRF1BP1LA0JNW5 1464 aa36.13■■■■□ 3.37
R3HDM4-205ENST00000589445 ZCCHC11Q5TAX3 1644 aaKnown RBP36.08■■■■□ 3.37
R3HDM4-205ENST00000589445 FMN1Q68DA7 1419 aa36.08■■■■□ 3.37
R3HDM4-205ENST00000589445 PCF11O94913 1555 aaKnown RBP36.04■■■■□ 3.36
R3HDM4-205ENST00000589445 HECW1Q76N89 1606 aa36.02■■■■□ 3.36
R3HDM4-205ENST00000589445 NPM1P06748 294 aaKnown RBP eCLIP35.98■■■■□ 3.35
R3HDM4-205ENST00000589445 KDM5BQ9UGL1 1544 aa35.96■■■■□ 3.35
R3HDM4-205ENST00000589445 NUP153P49790 1475 aaKnown RBP35.95■■■■□ 3.35
R3HDM4-205ENST00000589445 MAPKBP1O60336 1514 aa35.93■■■■□ 3.34
R3HDM4-205ENST00000589445 ARID3CA6NKF2 412 aa35.93■■■■□ 3.34
R3HDM4-205ENST00000589445 LRRIQ1Q96JM4 1722 aa35.88■■■■□ 3.34
R3HDM4-205ENST00000589445 FYCO1Q9BQS8 1478 aa35.86■■■■□ 3.33
R3HDM4-205ENST00000589445 ATP1B4Q9UN42 357 aaPredicted RBP35.86■■■■□ 3.33
R3HDM4-205ENST00000589445 CASKIN1Q8WXD9 1431 aa35.83■■■■□ 3.33
R3HDM4-205ENST00000589445 CDK13Q14004 1512 aaKnown RBP35.83■■■■□ 3.33
R3HDM4-205ENST00000589445 ATP10BO94823 1461 aa35.81■■■■□ 3.32
R3HDM4-205ENST00000589445 ASXL2Q76L83 1435 aa35.8■■■■□ 3.32
R3HDM4-205ENST00000589445 EPRSP07814 1512 aaKnown RBP35.78■■■■□ 3.32
R3HDM4-205ENST00000589445 KIF13AQ9H1H9 1805 aa35.76■■■■□ 3.31
R3HDM4-205ENST00000589445 VPS8Q8N3P4 1428 aa35.75■■■■□ 3.31
R3HDM4-205ENST00000589445 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.75■■■■□ 3.31
R3HDM4-205ENST00000589445 HNRNPUL2Q1KMD3 747 aaKnown RBP35.75■■■■□ 3.31
R3HDM4-205ENST00000589445 DIP2BQ9P265 1576 aa35.75■■■■□ 3.31
R3HDM4-205ENST00000589445 WDR7Q9Y4E6 1490 aa35.73■■■■□ 3.31
R3HDM4-205ENST00000589445 CCDC18Q5T9S5 1454 aa35.72■■■■□ 3.31
R3HDM4-205ENST00000589445 ABCC10Q5T3U5 1492 aa35.65■■■■□ 3.3
R3HDM4-205ENST00000589445 CFAP43Q8NDM7 1665 aa35.64■■■■□ 3.3
R3HDM4-205ENST00000589445 TSPOAP1O95153 1857 aa35.54■■■■□ 3.28
R3HDM4-205ENST00000589445 GLI2P10070 1586 aa35.53■■■■□ 3.28
R3HDM4-205ENST00000589445 FAM69CQ0P6D2 419 aa35.51■■■■□ 3.28
R3HDM4-205ENST00000589445 TIAM1Q13009 1591 aa35.51■■■■□ 3.27
R3HDM4-205ENST00000589445 KIF14Q15058 1648 aa35.5■■■■□ 3.27
R3HDM4-205ENST00000589445 PLEKHD1A6NEE1 506 aa35.49■■■■□ 3.27
R3HDM4-205ENST00000589445 KCNH8Q96L42 1107 aa35.49■■■■□ 3.27
R3HDM4-205ENST00000589445 MAP3K4Q9Y6R4 1608 aa35.49■■■■□ 3.27
R3HDM4-205ENST00000589445 MAGI3Q5TCQ9 1506 aa35.48■■■■□ 3.27
R3HDM4-205ENST00000589445 CDK11AQ9UQ88 783 aaPredicted RBP35.46■■■■□ 3.27
R3HDM4-205ENST00000589445 ABCA9Q8IUA7 1624 aa35.46■■■■□ 3.27
R3HDM4-205ENST00000589445 TROQ12816 1431 aaPredicted RBP35.44■■■■□ 3.26
R3HDM4-205ENST00000589445 TTC37Q6PGP7 1564 aa35.42■■■■□ 3.26
R3HDM4-205ENST00000589445 EHBP1L1Q8N3D4 1523 aa35.41■■■■□ 3.26
R3HDM4-205ENST00000589445 PPRC1Q5VV67 1664 aaKnown RBP35.37■■■■□ 3.25
R3HDM4-205ENST00000589445 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.37■■■■□ 3.255e-6■□□□□ 9.5
R3HDM4-205ENST00000589445 MTUS2Q5JR59 1369 aa35.36■■■■□ 3.25
R3HDM4-205ENST00000589445 MYO5CQ9NQX4 1742 aa35.34■■■■□ 3.25
R3HDM4-205ENST00000589445 MAP3K1Q13233 1512 aa35.32■■■■□ 3.25
R3HDM4-205ENST00000589445 APLP2Q06481 763 aa35.29■■■■□ 3.24
R3HDM4-205ENST00000589445 CD109Q6YHK3 1445 aa35.28■■■■□ 3.24
R3HDM4-205ENST00000589445 SUPT6HQ7KZ85 1726 aaKnown RBP35.28■■■■□ 3.24
R3HDM4-205ENST00000589445 KDM4FA0A1W2PPD8 638 aa35.27■■■■□ 3.24
R3HDM4-205ENST00000589445 KDM6BO15054 1643 aa35.26■■■■□ 3.24
R3HDM4-205ENST00000589445 ILDR1Q86SU0 546 aaPredicted RBP35.26■■■■□ 3.24
R3HDM4-205ENST00000589445 LRRC9Q6ZRR7 1453 aa35.25■■■■□ 3.23
R3HDM4-205ENST00000589445 TEX14Q8IWB6 1497 aa35.22■■■■□ 3.23
R3HDM4-205ENST00000589445 CDC42BPAQ5VT25 1732 aa35.2■■■■□ 3.23
R3HDM4-205ENST00000589445 PREX2Q70Z35 1606 aa35.2■■■■□ 3.23
R3HDM4-205ENST00000589445 CFAP74Q9C0B2 1584 aa35.18■■■■□ 3.22
R3HDM4-205ENST00000589445 ITSN2Q9NZM3 1697 aa35.15■■■■□ 3.22
R3HDM4-205ENST00000589445 CDC42BPBQ9Y5S2 1711 aa35.13■■■■□ 3.21
R3HDM4-205ENST00000589445 ARHGAP5Q13017 1502 aa35.12■■■■□ 3.21
R3HDM4-205ENST00000589445 NCOA2Q15596 1464 aa35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms