RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 CEP170Q5SW79 1584 aa14.81□□□□□ -0.04
CIRBP-218ENST00000588344 UBTFP17480 764 aaKnown RBP14.79□□□□□ -0.04
CIRBP-218ENST00000588344 KIF21BO75037 1637 aa14.76□□□□□ -0.05
CIRBP-218ENST00000588344 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
CIRBP-218ENST00000588344 CARMIL2Q6F5E8 1435 aa14.74□□□□□ -0.05
CIRBP-218ENST00000588344 PRG4Q92954 1404 aaPredicted RBP14.74□□□□□ -0.05
CIRBP-218ENST00000588344 ARHGEF11O15085 1522 aa14.71□□□□□ -0.05
CIRBP-218ENST00000588344 IQGAP2Q13576 1575 aa14.71□□□□□ -0.05
CIRBP-218ENST00000588344 SHROOM2Q13796 1616 aa14.7□□□□□ -0.06
CIRBP-218ENST00000588344 UGGT2Q9NYU1 1516 aa14.68□□□□□ -0.06
CIRBP-218ENST00000588344 CYB5RLQ6IPT4 315 aa14.68□□□□□ -0.06
CIRBP-218ENST00000588344 EHMT2Q96KQ7 1210 aa14.68□□□□□ -0.06
CIRBP-218ENST00000588344 TNIKQ9UKE5 1360 aa14.66□□□□□ -0.06
CIRBP-218ENST00000588344 RIMBP3CA6NJZ7 1639 aa14.64□□□□□ -0.07
CIRBP-218ENST00000588344 RIMBP3BA6NNM3 1639 aa14.64□□□□□ -0.07
CIRBP-218ENST00000588344 RIMBP3Q9UFD9 1639 aa14.64□□□□□ -0.07
CIRBP-218ENST00000588344 PTPRGP23470 1445 aa14.63□□□□□ -0.07
CIRBP-218ENST00000588344 DISP1Q96F81 1524 aa14.61□□□□□ -0.07
CIRBP-218ENST00000588344 CTTNBP2Q8WZ74 1663 aa14.61□□□□□ -0.07
CIRBP-218ENST00000588344 LOC105371045A0A1W2PR82 267 aa14.6□□□□□ -0.07
CIRBP-218ENST00000588344 ARAP1Q96P48 1450 aa14.6□□□□□ -0.07
CIRBP-218ENST00000588344 RANGAP1P46060 587 aaPredicted RBP14.59□□□□□ -0.07
CIRBP-218ENST00000588344 ERCC6L2Q5T890 1561 aa14.58□□□□□ -0.08
CIRBP-218ENST00000588344 P3H3Q8IVL6 736 aa14.57□□□□□ -0.08
CIRBP-218ENST00000588344 NPM1P06748 294 aaKnown RBP eCLIP14.56□□□□□ -0.08
CIRBP-218ENST00000588344 EFCAB5A4FU69 1503 aa14.56□□□□□ -0.08
CIRBP-218ENST00000588344 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
CIRBP-218ENST00000588344 KIAA0556O60303 1618 aa14.54□□□□□ -0.08
CIRBP-218ENST00000588344 UACAQ9BZF9 1416 aa14.51□□□□□ -0.09
CIRBP-218ENST00000588344 SAMD9Q5K651 1589 aa14.51□□□□□ -0.09
CIRBP-218ENST00000588344 CLIP1P30622 1438 aa14.5□□□□□ -0.09
CIRBP-218ENST00000588344 ARHGAP35Q9NRY4 1499 aa14.49□□□□□ -0.09
CIRBP-218ENST00000588344 FMN1Q68DA7 1419 aa14.49□□□□□ -0.09
CIRBP-218ENST00000588344 UHRF1BP1LA0JNW5 1464 aa14.48□□□□□ -0.09
CIRBP-218ENST00000588344 FHOD3Q2V2M9 1422 aa14.48□□□□□ -0.09
CIRBP-218ENST00000588344 CEP162Q5TB80 1403 aa14.47□□□□□ -0.09
CIRBP-218ENST00000588344 PLB1Q6P1J6 1458 aa14.43□□□□□ -0.1
CIRBP-218ENST00000588344 ABCC2Q92887 1545 aa14.42□□□□□ -0.1
CIRBP-218ENST00000588344 ABCA8O94911 1581 aa14.4□□□□□ -0.1
CIRBP-218ENST00000588344 ATP1B4Q9UN42 357 aaPredicted RBP14.39□□□□□ -0.11
CIRBP-218ENST00000588344 KDM5BQ9UGL1 1544 aa14.39□□□□□ -0.11
CIRBP-218ENST00000588344 CDK11AQ9UQ88 783 aaPredicted RBP14.38□□□□□ -0.11
CIRBP-218ENST00000588344 ADCY10Q96PN6 1610 aa14.37□□□□□ -0.11
CIRBP-218ENST00000588344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.37□□□□□ -0.11
CIRBP-218ENST00000588344 HNRNPUL2Q1KMD3 747 aaKnown RBP14.37□□□□□ -0.11
CIRBP-218ENST00000588344 CASKIN1Q8WXD9 1431 aa14.36□□□□□ -0.11
CIRBP-218ENST00000588344 PLEKHD1A6NEE1 506 aa14.35□□□□□ -0.11
CIRBP-218ENST00000588344 ATP10BO94823 1461 aa14.34□□□□□ -0.11
CIRBP-218ENST00000588344 RAPGEF6Q8TEU7 1601 aa14.33□□□□□ -0.11
CIRBP-218ENST00000588344 NUP153P49790 1475 aaKnown RBP14.33□□□□□ -0.12
CIRBP-218ENST00000588344 TRHP20396 242 aaPredicted RBP14.33□□□□□ -0.12
CIRBP-218ENST00000588344 MAPKBP1O60336 1514 aa14.32□□□□□ -0.12
CIRBP-218ENST00000588344 ARID3CA6NKF2 412 aa14.31□□□□□ -0.12
CIRBP-218ENST00000588344 ASXL2Q76L83 1435 aa14.31□□□□□ -0.12
CIRBP-218ENST00000588344 VPS8Q8N3P4 1428 aa14.31□□□□□ -0.12
CIRBP-218ENST00000588344 FYCO1Q9BQS8 1478 aa14.31□□□□□ -0.12
CIRBP-218ENST00000588344 EPRSP07814 1512 aaKnown RBP14.28□□□□□ -0.12
CIRBP-218ENST00000588344 FAM69CQ0P6D2 419 aa14.28□□□□□ -0.12
CIRBP-218ENST00000588344 CCDC18Q5T9S5 1454 aa14.28□□□□□ -0.12
CIRBP-218ENST00000588344 HECW1Q76N89 1606 aa14.28□□□□□ -0.12
CIRBP-218ENST00000588344 ABCC10Q5T3U5 1492 aa14.27□□□□□ -0.12
CIRBP-218ENST00000588344 APLP2Q06481 763 aa14.27□□□□□ -0.13
CIRBP-218ENST00000588344 WDR7Q9Y4E6 1490 aa14.26□□□□□ -0.13
CIRBP-218ENST00000588344 KCNH8Q96L42 1107 aa14.26□□□□□ -0.13
CIRBP-218ENST00000588344 ZCCHC11Q5TAX3 1644 aaKnown RBP14.26□□□□□ -0.13
CIRBP-218ENST00000588344 PCF11O94913 1555 aaKnown RBP14.21□□□□□ -0.14
CIRBP-218ENST00000588344 CDK13Q14004 1512 aaKnown RBP14.2□□□□□ -0.14
CIRBP-218ENST00000588344 TROQ12816 1431 aaPredicted RBP14.19□□□□□ -0.14
CIRBP-218ENST00000588344 GLI2P10070 1586 aa14.18□□□□□ -0.14
CIRBP-218ENST00000588344 MAP3K1Q13233 1512 aa14.18□□□□□ -0.14
CIRBP-218ENST00000588344 MTUS2Q5JR59 1369 aa14.18□□□□□ -0.14
CIRBP-218ENST00000588344 CD109Q6YHK3 1445 aa14.15□□□□□ -0.14
CIRBP-218ENST00000588344 DIP2BQ9P265 1576 aa14.15□□□□□ -0.14
CIRBP-218ENST00000588344 PHLDB1Q86UU1 1377 aa14.12□□□□□ -0.15
CIRBP-218ENST00000588344 TEX14Q8IWB6 1497 aa14.11□□□□□ -0.15
CIRBP-218ENST00000588344 MAGI3Q5TCQ9 1506 aa14.1□□□□□ -0.15
CIRBP-218ENST00000588344 EFCAB2Q5VUJ9 269 aa14.1□□□□□ -0.15
CIRBP-218ENST00000588344 LRRC9Q6ZRR7 1453 aa14.1□□□□□ -0.15
CIRBP-218ENST00000588344 TIAM1Q13009 1591 aa14.09□□□□□ -0.15
CIRBP-218ENST00000588344 KANK4Q5T7N3 995 aaPredicted RBP14.09□□□□□ -0.15
CIRBP-218ENST00000588344 PLCH2O75038 1416 aa14.08□□□□□ -0.15
CIRBP-218ENST00000588344 ABCA9Q8IUA7 1624 aa14.08□□□□□ -0.16
CIRBP-218ENST00000588344 EHBP1L1Q8N3D4 1523 aa14.07□□□□□ -0.16
CIRBP-218ENST00000588344 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.07□□□□□ -0.16
CIRBP-218ENST00000588344 KIF14Q15058 1648 aa14.07□□□□□ -0.16
CIRBP-218ENST00000588344 CCNB3Q8WWL7 1395 aa14.07□□□□□ -0.16
CIRBP-218ENST00000588344 MAP3K4Q9Y6R4 1608 aa14.05□□□□□ -0.16
CIRBP-218ENST00000588344 CFAP43Q8NDM7 1665 aa14.05□□□□□ -0.16
CIRBP-218ENST00000588344 LRRIQ1Q96JM4 1722 aa14.05□□□□□ -0.16
CIRBP-218ENST00000588344 CFDP1Q9UEE9 299 aaPredicted RBP14.05□□□□□ -0.16
CIRBP-218ENST00000588344 KIF13AQ9H1H9 1805 aa14.04□□□□□ -0.16
CIRBP-218ENST00000588344 NEO1Q92859 1461 aa14.04□□□□□ -0.16
CIRBP-218ENST00000588344 ARAP3Q8WWN8 1544 aa14.04□□□□□ -0.16
CIRBP-218ENST00000588344 GPATCH8Q9UKJ3 1502 aaKnown RBP14.01□□□□□ -0.17
CIRBP-218ENST00000588344 FANCAO15360 1455 aa14.01□□□□□ -0.17
CIRBP-218ENST00000588344 NCOA2Q15596 1464 aa14□□□□□ -0.17
CIRBP-218ENST00000588344 AKNAQ7Z591 1439 aa13.99□□□□□ -0.17
CIRBP-218ENST00000588344 TTC37Q6PGP7 1564 aa13.98□□□□□ -0.17
CIRBP-218ENST00000588344 RSPH4AQ5TD94 716 aa13.98□□□□□ -0.17
CIRBP-218ENST00000588344 ARHGAP5Q13017 1502 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms