RNA–Protein interactions for RNA: ENST00000588178.5

PRKAR1A-213, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 4

Gene PRKAR1A, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-213ENST00000588178 TOPBP1Q92547 1522 aa9.08□□□□□ -0.96
PRKAR1A-213ENST00000588178 SYNJ1O43426 1573 aa9.06□□□□□ -0.96
PRKAR1A-213ENST00000588178 DNMBPQ6XZF7 1577 aa9.04□□□□□ -0.96
PRKAR1A-213ENST00000588178 FBLN2P98095 1184 aa9.04□□□□□ -0.96
PRKAR1A-213ENST00000588178 WRNQ14191 1432 aaPredicted RBP eCLIP9.04□□□□□ -0.96
PRKAR1A-213ENST00000588178 POLA1P09884 1462 aaPredicted RBP9.02□□□□□ -0.96
PRKAR1A-213ENST00000588178 RAD54L2Q9Y4B4 1467 aa9.02□□□□□ -0.96
PRKAR1A-213ENST00000588178 TOP2BQ02880 1626 aa9.01□□□□□ -0.97
PRKAR1A-213ENST00000588178 FGD5Q6ZNL6 1462 aa9.01□□□□□ -0.97
PRKAR1A-213ENST00000588178 ZBTB12Q9Y330 459 aaPredicted RBP9□□□□□ -0.97
PRKAR1A-213ENST00000588178 TARBP1Q13395 1621 aaKnown RBP9□□□□□ -0.97
PRKAR1A-213ENST00000588178 BIVM-ERCC5R4GMW8 1640 aa9□□□□□ -0.97
PRKAR1A-213ENST00000588178 ZNF608Q9ULD9 1512 aaPredicted RBP9□□□□□ -0.97
PRKAR1A-213ENST00000588178 SOGA1O94964 1423 aa8.97□□□□□ -0.97
PRKAR1A-213ENST00000588178 TDRD9Q8NDG6 1382 aaKnown RBP8.95□□□□□ -0.98
PRKAR1A-213ENST00000588178 AQRO60306 1485 aaKnown RBP eCLIP8.95□□□□□ -0.988e-8■■■■■ 42.7
PRKAR1A-213ENST00000588178 RUSC2Q8N2Y8 1516 aa8.95□□□□□ -0.98
PRKAR1A-213ENST00000588178 FKBP8Q14318 412 aa8.94□□□□□ -0.98
PRKAR1A-213ENST00000588178 IFT140Q96RY7 1462 aa8.94□□□□□ -0.98
PRKAR1A-213ENST00000588178 ABCA10Q8WWZ4 1543 aa8.93□□□□□ -0.98
PRKAR1A-213ENST00000588178 WDR97A6NE52 1622 aa8.93□□□□□ -0.98
PRKAR1A-213ENST00000588178 CYB5RLQ6IPT4 315 aa8.89□□□□□ -0.99
PRKAR1A-213ENST00000588178 IGF1RP08069 1367 aa8.88□□□□□ -0.99
PRKAR1A-213ENST00000588178 SPDYE4A6NLX3 237 aa8.88□□□□□ -0.99
PRKAR1A-213ENST00000588178 ABCA5Q8WWZ7 1642 aa8.87□□□□□ -0.99
PRKAR1A-213ENST00000588178 EIF4G3O43432 1585 aaKnown RBP8.86□□□□□ -0.99
PRKAR1A-213ENST00000588178 GAPVD1Q14C86 1478 aa8.85□□□□□ -0.99
PRKAR1A-213ENST00000588178 ZNF692Q9BU19 519 aaPredicted RBP8.85□□□□□ -0.99
PRKAR1A-213ENST00000588178 GRIN2BQ13224 1484 aa8.82□□□□□ -1
PRKAR1A-213ENST00000588178 SPDYE2BA6NHP3 402 aa8.81□□□□□ -1
PRKAR1A-213ENST00000588178 SPDYE6P0CI01 402 aa8.81□□□□□ -1
PRKAR1A-213ENST00000588178 SPDYE2Q495Y8 402 aa8.81□□□□□ -1
PRKAR1A-213ENST00000588178 SNAPC4Q5SXM2 1469 aa8.8□□□□□ -1
PRKAR1A-213ENST00000588178 KIF27Q86VH2 1401 aa8.8□□□□□ -1
PRKAR1A-213ENST00000588178 PBRM1Q86U86 1689 aa8.79□□□□□ -1
PRKAR1A-213ENST00000588178 RIMBP3CA6NJZ7 1639 aa8.79□□□□□ -1
PRKAR1A-213ENST00000588178 RIMBP3BA6NNM3 1639 aa8.79□□□□□ -1
PRKAR1A-213ENST00000588178 RIMBP3Q9UFD9 1639 aa8.79□□□□□ -1
PRKAR1A-213ENST00000588178 ARHGEF11O15085 1522 aa8.79□□□□□ -1
PRKAR1A-213ENST00000588178 ERICH3Q5RHP9 1530 aa8.79□□□□□ -1
PRKAR1A-213ENST00000588178 RBM42Q9BTD8 480 aaKnown RBP8.78□□□□□ -1
PRKAR1A-213ENST00000588178 FAM9AQ8IZU1 332 aaPredicted RBP8.77□□□□□ -1.01
PRKAR1A-213ENST00000588178 SSUH2Q9Y2M2 353 aa8.77□□□□□ -1.01
PRKAR1A-213ENST00000588178 PRXQ9BXM0 1461 aa8.77□□□□□ -1.01
PRKAR1A-213ENST00000588178 MAGI1Q96QZ7 1491 aaPredicted RBP8.76□□□□□ -1.01
PRKAR1A-213ENST00000588178 CARMIL1Q5VZK9 1371 aa8.75□□□□□ -1.01
PRKAR1A-213ENST00000588178 ADAMTS12P58397 1594 aa8.75□□□□□ -1.01
PRKAR1A-213ENST00000588178 FHAD1B1AJZ9 1412 aa8.75□□□□□ -1.01
PRKAR1A-213ENST00000588178 ILDR1Q86SU0 546 aaPredicted RBP8.75□□□□□ -1.01
PRKAR1A-213ENST00000588178 SYNJ2O15056 1496 aa8.74□□□□□ -1.01
PRKAR1A-213ENST00000588178 CHD1O14646 1710 aa8.74□□□□□ -1.01
PRKAR1A-213ENST00000588178 NUP160Q12769 1436 aa8.71□□□□□ -1.01
PRKAR1A-213ENST00000588178 GRIN2AQ12879 1464 aa8.71□□□□□ -1.01
PRKAR1A-213ENST00000588178 RAPGEF2Q9Y4G8 1499 aa8.71□□□□□ -1.01
PRKAR1A-213ENST00000588178 CEP170Q5SW79 1584 aa8.71□□□□□ -1.02
PRKAR1A-213ENST00000588178 CHMP7Q8WUX9 453 aaPredicted RBP8.71□□□□□ -1.02
PRKAR1A-213ENST00000588178 EEA1Q15075 1411 aa8.7□□□□□ -1.02
PRKAR1A-213ENST00000588178 LOC105371045A0A1W2PR82 267 aa8.69□□□□□ -1.02
PRKAR1A-213ENST00000588178 AKT1S1Q96B36 256 aa8.69□□□□□ -1.02
PRKAR1A-213ENST00000588178 CLASP1Q7Z460 1538 aa8.69□□□□□ -1.02
PRKAR1A-213ENST00000588178 CUL7Q14999 1698 aa8.69□□□□□ -1.02
PRKAR1A-213ENST00000588178 REM2Q8IYK8 340 aaPredicted RBP8.68□□□□□ -1.02
PRKAR1A-213ENST00000588178 ARAP1Q96P48 1450 aa8.68□□□□□ -1.02
PRKAR1A-213ENST00000588178 ERCC6L2Q5T890 1561 aa8.65□□□□□ -1.02
PRKAR1A-213ENST00000588178 PROM2Q8N271 834 aa8.65□□□□□ -1.02
PRKAR1A-213ENST00000588178 KIF21BO75037 1637 aa8.65□□□□□ -1.03
PRKAR1A-213ENST00000588178 JPH4Q96JJ6 628 aa8.64□□□□□ -1.03
PRKAR1A-213ENST00000588178 CLEC11AQ9Y240 323 aa8.64□□□□□ -1.03
PRKAR1A-213ENST00000588178 KIAA0586Q9BVV6 1533 aa8.64□□□□□ -1.03
PRKAR1A-213ENST00000588178 PITPNM1O00562 1244 aa8.62□□□□□ -1.03
PRKAR1A-213ENST00000588178 SHROOM2Q13796 1616 aa8.62□□□□□ -1.03
PRKAR1A-213ENST00000588178 DISP1Q96F81 1524 aa8.59□□□□□ -1.03
PRKAR1A-213ENST00000588178 GOLGA3Q08378 1498 aa8.57□□□□□ -1.04
PRKAR1A-213ENST00000588178 PRG4Q92954 1404 aaPredicted RBP8.57□□□□□ -1.04
PRKAR1A-213ENST00000588178 UGGT2Q9NYU1 1516 aa8.57□□□□□ -1.04
PRKAR1A-213ENST00000588178 SPDYE1Q8NFV5 336 aaPredicted RBP8.56□□□□□ -1.04
PRKAR1A-213ENST00000588178 TNIKQ9UKE5 1360 aa8.56□□□□□ -1.04
PRKAR1A-213ENST00000588178 IQGAP2Q13576 1575 aa8.56□□□□□ -1.04
PRKAR1A-213ENST00000588178 UBTFP17480 764 aaKnown RBP8.55□□□□□ -1.04
PRKAR1A-213ENST00000588178 CTTNBP2Q8WZ74 1663 aa8.55□□□□□ -1.04
PRKAR1A-213ENST00000588178 P3H3Q8IVL6 736 aa8.53□□□□□ -1.04
PRKAR1A-213ENST00000588178 SAMD9Q5K651 1589 aa8.52□□□□□ -1.04
PRKAR1A-213ENST00000588178 ARHGAP35Q9NRY4 1499 aa8.52□□□□□ -1.05
PRKAR1A-213ENST00000588178 RANGAP1P46060 587 aaPredicted RBP8.51□□□□□ -1.05
PRKAR1A-213ENST00000588178 CHRDL2Q6WN34 429 aa8.51□□□□□ -1.05
PRKAR1A-213ENST00000588178 KIAA0556O60303 1618 aa8.51□□□□□ -1.05
PRKAR1A-213ENST00000588178 KDM4FA0A1W2PPD8 638 aa8.5□□□□□ -1.05
PRKAR1A-213ENST00000588178 PRR29P0C7W0 189 aa8.49□□□□□ -1.05
PRKAR1A-213ENST00000588178 FHOD3Q2V2M9 1422 aa8.48□□□□□ -1.05
PRKAR1A-213ENST00000588178 PTPRGP23470 1445 aa8.47□□□□□ -1.05
PRKAR1A-213ENST00000588178 CHADLQ6NUI6 762 aa8.47□□□□□ -1.05
PRKAR1A-213ENST00000588178 STAG3Q9UJ98 1225 aa8.47□□□□□ -1.05
PRKAR1A-213ENST00000588178 FBXO3Q9UK99 471 aa8.47□□□□□ -1.05
PRKAR1A-213ENST00000588178 CEP162Q5TB80 1403 aa8.46□□□□□ -1.05
PRKAR1A-213ENST00000588178 PLB1Q6P1J6 1458 aa8.46□□□□□ -1.05
PRKAR1A-213ENST00000588178 CLIP1P30622 1438 aa8.46□□□□□ -1.06
PRKAR1A-213ENST00000588178 VASPP50552 380 aaPredicted RBP8.45□□□□□ -1.06
PRKAR1A-213ENST00000588178 CARMIL2Q6F5E8 1435 aa8.45□□□□□ -1.06
PRKAR1A-213ENST00000588178 ABCA8O94911 1581 aa8.44□□□□□ -1.06
PRKAR1A-213ENST00000588178 ADCY10Q96PN6 1610 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 163.5 ms