RNA–Protein interactions for RNA: ENST00000588178.5

PRKAR1A-213, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 4

Gene PRKAR1A, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-213ENST00000588178 AEBP2Q6ZN18 517 aaPredicted RBP15.8■□□□□ 0.12
PRKAR1A-213ENST00000588178 CHIC1Q5VXU3 224 aa15.32■□□□□ 0.04
PRKAR1A-213ENST00000588178 PHF23Q9BUL5 403 aaPredicted RBP13.55□□□□□ -0.24
PRKAR1A-213ENST00000588178 SENP3Q9H4L4 574 aaPredicted RBP13.27□□□□□ -0.29
PRKAR1A-213ENST00000588178 NISCHQ9Y2I1 1504 aa12.58□□□□□ -0.4
PRKAR1A-213ENST00000588178 FOXD1Q16676 465 aa12.41□□□□□ -0.42
PRKAR1A-213ENST00000588178 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
PRKAR1A-213ENST00000588178 ADRA2BP18089 450 aa11.99□□□□□ -0.49
PRKAR1A-213ENST00000588178 PPP6R1Q9UPN7 881 aa11.99□□□□□ -0.49
PRKAR1A-213ENST00000588178 PIAS4Q8N2W9 510 aaPredicted RBP11.71□□□□□ -0.53
PRKAR1A-213ENST00000588178 MSH5O43196 834 aa11.33□□□□□ -0.6
PRKAR1A-213ENST00000588178 CCDC180Q9P1Z9 1646 aa11.02□□□□□ -0.65
PRKAR1A-213ENST00000588178 PPP4R3CPQ6ZMV5 832 aa10.99□□□□□ -0.65
PRKAR1A-213ENST00000588178 MAPK8IP2Q13387 824 aaPredicted RBP10.91□□□□□ -0.66
PRKAR1A-213ENST00000588178 KCNA4P22459 653 aa10.8□□□□□ -0.68
PRKAR1A-213ENST00000588178 SCAF1Q9H7N4 1312 aaKnown RBP10.78□□□□□ -0.68
PRKAR1A-213ENST00000588178 ABCC9O60706 1549 aa10.75□□□□□ -0.69
PRKAR1A-213ENST00000588178 DNAJC5BQ9UF47 199 aa10.64□□□□□ -0.71
PRKAR1A-213ENST00000588178 CNKSR2Q8WXI2 1034 aa10.62□□□□□ -0.71
PRKAR1A-213ENST00000588178 NCBP3Q53F19 620 aaKnown RBP10.61□□□□□ -0.71
PRKAR1A-213ENST00000588178 DMRT2Q9Y5R5 561 aa10.61□□□□□ -0.71
PRKAR1A-213ENST00000588178 NPM3O75607 178 aaKnown RBP10.56□□□□□ -0.72
PRKAR1A-213ENST00000588178 ZCCHC6Q5VYS8 1495 aaKnown RBP10.49□□□□□ -0.73
PRKAR1A-213ENST00000588178 POTEDQ86YR6 584 aa10.44□□□□□ -0.74
PRKAR1A-213ENST00000588178 RNF216Q9NWF9 866 aaPredicted RBP10.4□□□□□ -0.74
PRKAR1A-213ENST00000588178 DCAF8L2P0C7V8 631 aa10.39□□□□□ -0.75
PRKAR1A-213ENST00000588178 DCAF1Q9Y4B6 1507 aa10.38□□□□□ -0.75
PRKAR1A-213ENST00000588178 MYO15BQ96JP2 1530 aa10.37□□□□□ -0.75
PRKAR1A-213ENST00000588178 HOXD11P31277 338 aaPredicted RBP10.36□□□□□ -0.75
PRKAR1A-213ENST00000588178 NACADO15069 1562 aa10.35□□□□□ -0.75
PRKAR1A-213ENST00000588178 DCAF8L1A6NGE4 600 aa10.3□□□□□ -0.76
PRKAR1A-213ENST00000588178 RB1CC1Q8TDY2 1594 aa10.29□□□□□ -0.76
PRKAR1A-213ENST00000588178 SLC4A1APQ9BWU0 796 aaKnown RBP10.24□□□□□ -0.77
PRKAR1A-213ENST00000588178 UNC13AQ9UPW8 1703 aa10.17□□□□□ -0.78
PRKAR1A-213ENST00000588178 DNAJC5Q9H3Z4 198 aa10.14□□□□□ -0.79
PRKAR1A-213ENST00000588178 BICRAQ9NZM4 1560 aa10.14□□□□□ -0.79
PRKAR1A-213ENST00000588178 PABPN1Q86U42 306 aaKnown RBP eCLIP10.11□□□□□ -0.79
PRKAR1A-213ENST00000588178 SCRIBQ14160 1630 aa10.11□□□□□ -0.79
PRKAR1A-213ENST00000588178 EHMT2Q96KQ7 1210 aa10.07□□□□□ -0.8
PRKAR1A-213ENST00000588178 SHROOM4Q9ULL8 1493 aa10.02□□□□□ -0.81
PRKAR1A-213ENST00000588178 SLC4A2P04920 1241 aa9.99□□□□□ -0.81
PRKAR1A-213ENST00000588178 ZBTB22O15209 634 aa9.97□□□□□ -0.81
PRKAR1A-213ENST00000588178 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.95□□□□□ -0.82
PRKAR1A-213ENST00000588178 CECR2Q9BXF3 1484 aa9.86□□□□□ -0.83
PRKAR1A-213ENST00000588178 CSRNP3Q8WYN3 585 aa9.86□□□□□ -0.83
PRKAR1A-213ENST00000588178 FOXD4L1Q9NU39 408 aa9.86□□□□□ -0.83
PRKAR1A-213ENST00000588178 U3KPZ7 1027 aaPredicted RBP9.81□□□□□ -0.84
PRKAR1A-213ENST00000588178 EIF4G1Q04637 1599 aaKnown RBP9.77□□□□□ -0.85
PRKAR1A-213ENST00000588178 RNF39Q9H2S5 420 aa9.76□□□□□ -0.85
PRKAR1A-213ENST00000588178 MROH2BQ7Z745 1585 aa9.74□□□□□ -0.85
PRKAR1A-213ENST00000588178 CC2D2AQ9P2K1 1620 aa9.7□□□□□ -0.86
PRKAR1A-213ENST00000588178 MYCNP04198 464 aaPredicted RBP9.69□□□□□ -0.86
PRKAR1A-213ENST00000588178 SMARCA4P51532 1647 aa9.69□□□□□ -0.86
PRKAR1A-213ENST00000588178 RSF1Q96T23 1441 aaPredicted RBP9.68□□□□□ -0.86
PRKAR1A-213ENST00000588178 BAZ1AQ9NRL2 1556 aaPredicted RBP9.66□□□□□ -0.86
PRKAR1A-213ENST00000588178 ATAD2BQ9ULI0 1458 aa9.65□□□□□ -0.87
PRKAR1A-213ENST00000588178 NCAPD3P42695 1498 aa9.62□□□□□ -0.87
PRKAR1A-213ENST00000588178 PEG3Q9GZU2 1588 aa9.62□□□□□ -0.87
PRKAR1A-213ENST00000588178 WIZO95785 1651 aa9.61□□□□□ -0.87
PRKAR1A-213ENST00000588178 SPINK5Q9NQ38 1064 aaPredicted RBP9.59□□□□□ -0.87
PRKAR1A-213ENST00000588178 C1QBPQ07021 282 aaKnown RBP9.58□□□□□ -0.88
PRKAR1A-213ENST00000588178 ATF5Q9Y2D1 282 aaPredicted RBP9.58□□□□□ -0.88
PRKAR1A-213ENST00000588178 CACNB1Q02641 598 aaPredicted RBP9.56□□□□□ -0.88
PRKAR1A-213ENST00000588178 SAMD1Q6SPF0 538 aaPredicted RBP9.54□□□□□ -0.88
PRKAR1A-213ENST00000588178 SMARCA2P51531 1590 aa9.54□□□□□ -0.88
PRKAR1A-213ENST00000588178 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.53□□□□□ -0.88
PRKAR1A-213ENST00000588178 HNRNPUL2Q1KMD3 747 aaKnown RBP9.53□□□□□ -0.88
PRKAR1A-213ENST00000588178 CAPN15O75808 1086 aa9.52□□□□□ -0.89
PRKAR1A-213ENST00000588178 HMGXB3Q12766 1538 aa9.51□□□□□ -0.89
PRKAR1A-213ENST00000588178 TRHP20396 242 aaPredicted RBP9.5□□□□□ -0.89
PRKAR1A-213ENST00000588178 BAZ1BQ9UIG0 1483 aaKnown RBP9.48□□□□□ -0.89
PRKAR1A-213ENST00000588178 SUPT5HO00267 1087 aaKnown RBP9.48□□□□□ -0.89
PRKAR1A-213ENST00000588178 TRIM41Q8WV44 630 aa9.48□□□□□ -0.89
PRKAR1A-213ENST00000588178 CUX2O14529 1486 aa9.46□□□□□ -0.9
PRKAR1A-213ENST00000588178 TOP2AP11388 1531 aaKnown RBP9.46□□□□□ -0.9
PRKAR1A-213ENST00000588178 CCDC88BA6NC98 1476 aa9.42□□□□□ -0.9
PRKAR1A-213ENST00000588178 ABCB7O75027 752 aa9.41□□□□□ -0.9
PRKAR1A-213ENST00000588178 ATXN8OSP0DMR3 200 aa9.41□□□□□ -0.9
PRKAR1A-213ENST00000588178 APLP2Q06481 763 aa9.41□□□□□ -0.9
PRKAR1A-213ENST00000588178 NESP48681 1621 aa9.38□□□□□ -0.91
PRKAR1A-213ENST00000588178 ZNF219Q9P2Y4 722 aaPredicted RBP9.36□□□□□ -0.91
PRKAR1A-213ENST00000588178 CADPSQ9ULU8 1353 aa9.33□□□□□ -0.92
PRKAR1A-213ENST00000588178 ERCC6Q03468 1493 aa9.33□□□□□ -0.92
PRKAR1A-213ENST00000588178 CFTRP13569 1480 aa9.32□□□□□ -0.92
PRKAR1A-213ENST00000588178 DSG3P32926 999 aa9.31□□□□□ -0.92
PRKAR1A-213ENST00000588178 POLA2Q14181 598 aa9.3□□□□□ -0.92
PRKAR1A-213ENST00000588178 LAMC3Q9Y6N6 1575 aa9.25□□□□□ -0.93
PRKAR1A-213ENST00000588178 KIF21AQ7Z4S6 1674 aa9.2□□□□□ -0.94
PRKAR1A-213ENST00000588178 FANCD2Q9BXW9 1451 aa9.19□□□□□ -0.94
PRKAR1A-213ENST00000588178 PDS5BQ9NTI5 1447 aa9.18□□□□□ -0.94
PRKAR1A-213ENST00000588178 URB2Q14146 1524 aaKnown RBP9.15□□□□□ -0.94
PRKAR1A-213ENST00000588178 PRDM2Q13029 1718 aa9.15□□□□□ -0.94
PRKAR1A-213ENST00000588178 THOC2Q8NI27 1593 aaKnown RBP9.14□□□□□ -0.95
PRKAR1A-213ENST00000588178 MKRN4PQ13434 485 aaPredicted RBP9.12□□□□□ -0.95
PRKAR1A-213ENST00000588178 CEP164Q9UPV0 1460 aa9.11□□□□□ -0.95
PRKAR1A-213ENST00000588178 CUX1P39880 1505 aa9.1□□□□□ -0.95
PRKAR1A-213ENST00000588178 MRC2Q9UBG0 1479 aa9.1□□□□□ -0.95
PRKAR1A-213ENST00000588178 ABCC8Q09428 1581 aa9.1□□□□□ -0.95
PRKAR1A-213ENST00000588178 WDR62O43379 1518 aa9.09□□□□□ -0.95
PRKAR1A-213ENST00000588178 OSCARQ8IYS5 282 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms