RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 AEBP2Q6ZN18 517 aaPredicted RBP24.72■■□□□ 1.55
ERCC1-205ENST00000587888 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
ERCC1-205ENST00000587888 NPM1P06748 294 aaKnown RBP eCLIP24.69■■□□□ 1.54
ERCC1-205ENST00000587888 KIAA0586Q9BVV6 1533 aa24.64■■□□□ 1.53
ERCC1-205ENST00000587888 FAM69CQ0P6D2 419 aa24.61■■□□□ 1.53
ERCC1-205ENST00000587888 CUL7Q14999 1698 aa24.61■■□□□ 1.53
ERCC1-205ENST00000587888 KIF13AQ9H1H9 1805 aa24.6■■□□□ 1.53
ERCC1-205ENST00000587888 CARMIL1Q5VZK9 1371 aa24.59■■□□□ 1.53
ERCC1-205ENST00000587888 TTBK1Q5TCY1 1321 aaPredicted RBP24.58■■□□□ 1.52
ERCC1-205ENST00000587888 ADCY10Q96PN6 1610 aa24.53■■□□□ 1.52
ERCC1-205ENST00000587888 ABCC10Q5T3U5 1492 aa24.51■■□□□ 1.51
ERCC1-205ENST00000587888 PTPRGP23470 1445 aa24.48■■□□□ 1.51
ERCC1-205ENST00000587888 MAPKBP1O60336 1514 aa24.47■■□□□ 1.51
ERCC1-205ENST00000587888 CARMIL2Q6F5E8 1435 aa24.43■■□□□ 1.5
ERCC1-205ENST00000587888 DIP2BQ9P265 1576 aa24.42■■□□□ 1.5
ERCC1-205ENST00000587888 TNIKQ9UKE5 1360 aa24.41■■□□□ 1.5
ERCC1-205ENST00000587888 IQGAP2Q13576 1575 aa24.37■■□□□ 1.49
ERCC1-205ENST00000587888 TSPOAP1O95153 1857 aa24.34■■□□□ 1.49
ERCC1-205ENST00000587888 RAPGEF2Q9Y4G8 1499 aa24.32■■□□□ 1.48
ERCC1-205ENST00000587888 ABCC2Q92887 1545 aa24.3■■□□□ 1.48
ERCC1-205ENST00000587888 DISP1Q96F81 1524 aa24.28■■□□□ 1.48
ERCC1-205ENST00000587888 UACAQ9BZF9 1416 aa24.27■■□□□ 1.48
ERCC1-205ENST00000587888 ASXL2Q76L83 1435 aa24.26■■□□□ 1.47
ERCC1-205ENST00000587888 KDM6BO15054 1643 aa24.25■■□□□ 1.47
ERCC1-205ENST00000587888 UHRF1BP1LA0JNW5 1464 aa24.23■■□□□ 1.47
ERCC1-205ENST00000587888 PLB1Q6P1J6 1458 aa24.22■■□□□ 1.47
ERCC1-205ENST00000587888 UGGT2Q9NYU1 1516 aa24.2■■□□□ 1.47
ERCC1-205ENST00000587888 KIAA0556O60303 1618 aa24.14■■□□□ 1.46
ERCC1-205ENST00000587888 GLI2P10070 1586 aa24.13■■□□□ 1.45
ERCC1-205ENST00000587888 KDM4FA0A1W2PPD8 638 aa24.13■■□□□ 1.45
ERCC1-205ENST00000587888 KDM5BQ9UGL1 1544 aa24.12■■□□□ 1.45
ERCC1-205ENST00000587888 ZCCHC11Q5TAX3 1644 aaKnown RBP24.09■■□□□ 1.45
ERCC1-205ENST00000587888 EPRSP07814 1512 aaKnown RBP24.09■■□□□ 1.45
ERCC1-205ENST00000587888 PPRC1Q5VV67 1664 aaKnown RBP24.08■■□□□ 1.44
ERCC1-205ENST00000587888 CTTNBP2Q8WZ74 1663 aa24.07■■□□□ 1.44
ERCC1-205ENST00000587888 GOLGA3Q08378 1498 aa24.04■■□□□ 1.44
ERCC1-205ENST00000587888 PRXQ9BXM0 1461 aa24.02■■□□□ 1.44
ERCC1-205ENST00000587888 KCNH8Q96L42 1107 aa24.02■■□□□ 1.44
ERCC1-205ENST00000587888 MAP3K4Q9Y6R4 1608 aa24■■□□□ 1.43
ERCC1-205ENST00000587888 P3H3Q8IVL6 736 aa24■■□□□ 1.43
ERCC1-205ENST00000587888 COL17A1Q9UMD9 1497 aaPredicted RBP23.99■■□□□ 1.43
ERCC1-205ENST00000587888 WDR7Q9Y4E6 1490 aa23.98■■□□□ 1.43
ERCC1-205ENST00000587888 TEX14Q8IWB6 1497 aa23.96■■□□□ 1.43
ERCC1-205ENST00000587888 FAM9AQ8IZU1 332 aaPredicted RBP23.95■■□□□ 1.42
ERCC1-205ENST00000587888 ARID3CA6NKF2 412 aa23.94■■□□□ 1.42
ERCC1-205ENST00000587888 CSRNP3Q8WYN3 585 aa23.94■■□□□ 1.42
ERCC1-205ENST00000587888 ABCA8O94911 1581 aa23.94■■□□□ 1.42
ERCC1-205ENST00000587888 CD109Q6YHK3 1445 aa23.89■■□□□ 1.41
ERCC1-205ENST00000587888 RANGAP1P46060 587 aaPredicted RBP23.86■■□□□ 1.41
ERCC1-205ENST00000587888 ADGRL1O94910 1474 aa23.86■■□□□ 1.41
ERCC1-205ENST00000587888 MAGI3Q5TCQ9 1506 aa23.8■■□□□ 1.4
ERCC1-205ENST00000587888 CFAP43Q8NDM7 1665 aa23.8■■□□□ 1.4
ERCC1-205ENST00000587888 ATP10BO94823 1461 aa23.8■■□□□ 1.4
ERCC1-205ENST00000587888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.79■■□□□ 1.4
ERCC1-205ENST00000587888 HNRNPUL2Q1KMD3 747 aaKnown RBP23.79■■□□□ 1.4
ERCC1-205ENST00000587888 SAMD9Q5K651 1589 aa23.72■■□□□ 1.39
ERCC1-205ENST00000587888 EEA1Q15075 1411 aa23.7■■□□□ 1.38
ERCC1-205ENST00000587888 RAPGEF6Q8TEU7 1601 aa23.68■■□□□ 1.38
ERCC1-205ENST00000587888 FHOD3Q2V2M9 1422 aa23.64■■□□□ 1.37
ERCC1-205ENST00000587888 EHMT2Q96KQ7 1210 aa23.63■■□□□ 1.37
ERCC1-205ENST00000587888 ARAP3Q8WWN8 1544 aa23.63■■□□□ 1.37
ERCC1-205ENST00000587888 ABCA9Q8IUA7 1624 aa23.62■■□□□ 1.37
ERCC1-205ENST00000587888 RAPGEF3O95398 923 aa23.61■■□□□ 1.37
ERCC1-205ENST00000587888 PLEKHD1A6NEE1 506 aa23.6■■□□□ 1.37
ERCC1-205ENST00000587888 NUP153P49790 1475 aaKnown RBP23.6■■□□□ 1.37
ERCC1-205ENST00000587888 PHLDB1Q86UU1 1377 aa23.58■■□□□ 1.37
ERCC1-205ENST00000587888 KIF21BO75037 1637 aa23.58■■□□□ 1.36
ERCC1-205ENST00000587888 HECW2Q9P2P5 1572 aa23.52■■□□□ 1.36
ERCC1-205ENST00000587888 NEO1Q92859 1461 aa23.52■■□□□ 1.36
ERCC1-205ENST00000587888 UBTFP17480 764 aaKnown RBP23.52■■□□□ 1.36
ERCC1-205ENST00000587888 ATP1B4Q9UN42 357 aaPredicted RBP23.49■■□□□ 1.35
ERCC1-205ENST00000587888 ILDR1Q86SU0 546 aaPredicted RBP23.48■■□□□ 1.35
ERCC1-205ENST00000587888 ARID4BQ4LE39 1312 aaPredicted RBP23.48■■□□□ 1.35
ERCC1-205ENST00000587888 EFCAB5A4FU69 1503 aa23.47■■□□□ 1.35
ERCC1-205ENST00000587888 CHIC1Q5VXU3 224 aa23.45■■□□□ 1.34
ERCC1-205ENST00000587888 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
ERCC1-205ENST00000587888 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.41■■□□□ 1.34
ERCC1-205ENST00000587888 FRMPD1Q5SYB0 1578 aa23.4■■□□□ 1.34
ERCC1-205ENST00000587888 DENND4BO75064 1496 aaPredicted RBP23.4■■□□□ 1.34
ERCC1-205ENST00000587888 CDK13Q14004 1512 aaKnown RBP23.39■■□□□ 1.34
ERCC1-205ENST00000587888 FANCAO15360 1455 aa23.39■■□□□ 1.34
ERCC1-205ENST00000587888 PTPRMP28827 1452 aa23.36■■□□□ 1.33
ERCC1-205ENST00000587888 ADAMTSL3P82987 1691 aa23.36■■□□□ 1.33
ERCC1-205ENST00000587888 TTC37Q6PGP7 1564 aa23.35■■□□□ 1.33
ERCC1-205ENST00000587888 BCORL1Q5H9F3 1711 aa23.32■■□□□ 1.32
ERCC1-205ENST00000587888 FMN1Q68DA7 1419 aa23.32■■□□□ 1.32
ERCC1-205ENST00000587888 CFAP74Q9C0B2 1584 aa23.31■■□□□ 1.32
ERCC1-205ENST00000587888 ARHGAP35Q9NRY4 1499 aa23.31■■□□□ 1.32
ERCC1-205ENST00000587888 RICTORQ6R327 1708 aa23.31■■□□□ 1.32
ERCC1-205ENST00000587888 CDK11AQ9UQ88 783 aaPredicted RBP23.3■■□□□ 1.32
ERCC1-205ENST00000587888 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
ERCC1-205ENST00000587888 PLCH2O75038 1416 aa23.28■■□□□ 1.32
ERCC1-205ENST00000587888 MADDQ8WXG6 1647 aa23.27■■□□□ 1.32
ERCC1-205ENST00000587888 SCAPERQ9BY12 1400 aa23.26■■□□□ 1.31
ERCC1-205ENST00000587888 ARHGEF40Q8TER5 1519 aa23.26■■□□□ 1.31
ERCC1-205ENST00000587888 HECW1Q76N89 1606 aa23.26■■□□□ 1.31
ERCC1-205ENST00000587888 MLECQ14165 292 aa23.25■■□□□ 1.31
ERCC1-205ENST00000587888 EFCAB2Q5VUJ9 269 aa23.25■■□□□ 1.31
ERCC1-205ENST00000587888 YEATS2Q9ULM3 1422 aa23.25■■□□□ 1.31
ERCC1-205ENST00000587888 ZFYVE16Q7Z3T8 1539 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms