RNA–Protein interactions for RNA: ENST00000587824.5

ATP6V0A1-215, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 4

Gene ATP6V0A1, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-215ENST00000587824 CUX1P39880 1505 aa13.73□□□□□ -0.21
ATP6V0A1-215ENST00000587824 ABCC8Q09428 1581 aa13.72□□□□□ -0.21
ATP6V0A1-215ENST00000587824 ZNF608Q9ULD9 1512 aaPredicted RBP13.72□□□□□ -0.21
ATP6V0A1-215ENST00000587824 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.21
ATP6V0A1-215ENST00000587824 IFT140Q96RY7 1462 aa13.71□□□□□ -0.21
ATP6V0A1-215ENST00000587824 REM2Q8IYK8 340 aaPredicted RBP13.7□□□□□ -0.22
ATP6V0A1-215ENST00000587824 FBLN2P98095 1184 aa13.69□□□□□ -0.22
ATP6V0A1-215ENST00000587824 FGD5Q6ZNL6 1462 aa13.68□□□□□ -0.22
ATP6V0A1-215ENST00000587824 RAD54L2Q9Y4B4 1467 aa13.68□□□□□ -0.22
ATP6V0A1-215ENST00000587824 TARBP1Q13395 1621 aaKnown RBP13.65□□□□□ -0.22
ATP6V0A1-215ENST00000587824 EIF4G3O43432 1585 aaKnown RBP13.65□□□□□ -0.22
ATP6V0A1-215ENST00000587824 DNAJC5Q9H3Z4 198 aa13.64□□□□□ -0.23
ATP6V0A1-215ENST00000587824 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
ATP6V0A1-215ENST00000587824 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
ATP6V0A1-215ENST00000587824 SPDYE2Q495Y8 402 aa13.63□□□□□ -0.23
ATP6V0A1-215ENST00000587824 SOGA1O94964 1423 aa13.62□□□□□ -0.23
ATP6V0A1-215ENST00000587824 SYNJ1O43426 1573 aa13.62□□□□□ -0.23
ATP6V0A1-215ENST00000587824 AQRO60306 1485 aaKnown RBP eCLIP13.61□□□□□ -0.232e-9■■■■□ 20.3
ATP6V0A1-215ENST00000587824 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
ATP6V0A1-215ENST00000587824 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
ATP6V0A1-215ENST00000587824 TDRD9Q8NDG6 1382 aaKnown RBP13.58□□□□□ -0.23
ATP6V0A1-215ENST00000587824 MKRN4PQ13434 485 aaPredicted RBP13.58□□□□□ -0.24
ATP6V0A1-215ENST00000587824 TOP2BQ02880 1626 aa13.56□□□□□ -0.24
ATP6V0A1-215ENST00000587824 BIVM-ERCC5R4GMW8 1640 aa13.56□□□□□ -0.24
ATP6V0A1-215ENST00000587824 WDR97A6NE52 1622 aa13.55□□□□□ -0.24
ATP6V0A1-215ENST00000587824 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
ATP6V0A1-215ENST00000587824 SNAPC4Q5SXM2 1469 aa13.51□□□□□ -0.25
ATP6V0A1-215ENST00000587824 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
ATP6V0A1-215ENST00000587824 PIP4P2Q8N4L2 257 aa13.49□□□□□ -0.25
ATP6V0A1-215ENST00000587824 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
ATP6V0A1-215ENST00000587824 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
ATP6V0A1-215ENST00000587824 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
ATP6V0A1-215ENST00000587824 GAPVD1Q14C86 1478 aa13.47□□□□□ -0.25
ATP6V0A1-215ENST00000587824 CHD1O14646 1710 aa13.47□□□□□ -0.25
ATP6V0A1-215ENST00000587824 PBRM1Q86U86 1689 aa13.46□□□□□ -0.26
ATP6V0A1-215ENST00000587824 SSUH2Q9Y2M2 353 aa13.45□□□□□ -0.26
ATP6V0A1-215ENST00000587824 MAGI1Q96QZ7 1491 aaPredicted RBP13.42□□□□□ -0.26
ATP6V0A1-215ENST00000587824 ZNF692Q9BU19 519 aaPredicted RBP13.41□□□□□ -0.26
ATP6V0A1-215ENST00000587824 ADAMTS12P58397 1594 aa13.38□□□□□ -0.27
ATP6V0A1-215ENST00000587824 SYNJ2O15056 1496 aa13.38□□□□□ -0.27
ATP6V0A1-215ENST00000587824 CHMP7Q8WUX9 453 aaPredicted RBP13.37□□□□□ -0.27
ATP6V0A1-215ENST00000587824 SPDYE1Q8NFV5 336 aaPredicted RBP13.36□□□□□ -0.27
ATP6V0A1-215ENST00000587824 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
ATP6V0A1-215ENST00000587824 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.28
ATP6V0A1-215ENST00000587824 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
ATP6V0A1-215ENST00000587824 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
ATP6V0A1-215ENST00000587824 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
ATP6V0A1-215ENST00000587824 GRIN2AQ12879 1464 aa13.31□□□□□ -0.28
ATP6V0A1-215ENST00000587824 ARHGEF11O15085 1522 aa13.31□□□□□ -0.28
ATP6V0A1-215ENST00000587824 CLASP1Q7Z460 1538 aa13.31□□□□□ -0.28
ATP6V0A1-215ENST00000587824 FHAD1B1AJZ9 1412 aa13.3□□□□□ -0.28
ATP6V0A1-215ENST00000587824 KIF27Q86VH2 1401 aa13.3□□□□□ -0.28
ATP6V0A1-215ENST00000587824 TRIM41Q8WV44 630 aa13.29□□□□□ -0.28
ATP6V0A1-215ENST00000587824 SP7Q8TDD2 431 aaPredicted RBP13.28□□□□□ -0.28
ATP6V0A1-215ENST00000587824 CEP170Q5SW79 1584 aa13.27□□□□□ -0.29
ATP6V0A1-215ENST00000587824 RUSC2Q8N2Y8 1516 aa13.25□□□□□ -0.29
ATP6V0A1-215ENST00000587824 CLEC11AQ9Y240 323 aa13.25□□□□□ -0.29
ATP6V0A1-215ENST00000587824 IGF1RP08069 1367 aa13.24□□□□□ -0.29
ATP6V0A1-215ENST00000587824 NUP160Q12769 1436 aa13.23□□□□□ -0.29
ATP6V0A1-215ENST00000587824 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
ATP6V0A1-215ENST00000587824 CUL7Q14999 1698 aa13.21□□□□□ -0.29
ATP6V0A1-215ENST00000587824 HAX1O00165 279 aa13.21□□□□□ -0.29
ATP6V0A1-215ENST00000587824 ERCC6L2Q5T890 1561 aa13.19□□□□□ -0.3
ATP6V0A1-215ENST00000587824 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
ATP6V0A1-215ENST00000587824 CARMIL1Q5VZK9 1371 aa13.18□□□□□ -0.3
ATP6V0A1-215ENST00000587824 CYB5RLQ6IPT4 315 aa13.17□□□□□ -0.3
ATP6V0A1-215ENST00000587824 SHROOM2Q13796 1616 aa13.13□□□□□ -0.31
ATP6V0A1-215ENST00000587824 PRG4Q92954 1404 aaPredicted RBP13.1□□□□□ -0.31
ATP6V0A1-215ENST00000587824 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
ATP6V0A1-215ENST00000587824 PRR29P0C7W0 189 aa13.09□□□□□ -0.31
ATP6V0A1-215ENST00000587824 KIAA0586Q9BVV6 1533 aa13.08□□□□□ -0.31
ATP6V0A1-215ENST00000587824 FAM9AQ8IZU1 332 aaPredicted RBP13.07□□□□□ -0.32
ATP6V0A1-215ENST00000587824 JPH4Q96JJ6 628 aa13.07□□□□□ -0.32
ATP6V0A1-215ENST00000587824 EVX2Q03828 476 aa13.05□□□□□ -0.32
ATP6V0A1-215ENST00000587824 PRXQ9BXM0 1461 aa13.04□□□□□ -0.32
ATP6V0A1-215ENST00000587824 IQGAP2Q13576 1575 aa13.04□□□□□ -0.32
ATP6V0A1-215ENST00000587824 C19orf67A6NJJ6 358 aa13.03□□□□□ -0.32
ATP6V0A1-215ENST00000587824 TTBK1Q5TCY1 1321 aaPredicted RBP13.01□□□□□ -0.33
ATP6V0A1-215ENST00000587824 EEA1Q15075 1411 aa12.99□□□□□ -0.33
ATP6V0A1-215ENST00000587824 CHADLQ6NUI6 762 aa12.98□□□□□ -0.33
ATP6V0A1-215ENST00000587824 CTTNBP2Q8WZ74 1663 aa12.98□□□□□ -0.33
ATP6V0A1-215ENST00000587824 DISP1Q96F81 1524 aa12.96□□□□□ -0.33
ATP6V0A1-215ENST00000587824 SPDYE4A6NLX3 237 aa12.95□□□□□ -0.34
ATP6V0A1-215ENST00000587824 UGGT2Q9NYU1 1516 aa12.94□□□□□ -0.34
ATP6V0A1-215ENST00000587824 CARMIL2Q6F5E8 1435 aa12.94□□□□□ -0.34
ATP6V0A1-215ENST00000587824 KIAA0556O60303 1618 aa12.93□□□□□ -0.34
ATP6V0A1-215ENST00000587824 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
ATP6V0A1-215ENST00000587824 ADCY10Q96PN6 1610 aa12.92□□□□□ -0.34
ATP6V0A1-215ENST00000587824 PTPRGP23470 1445 aa12.92□□□□□ -0.34
ATP6V0A1-215ENST00000587824 TNIKQ9UKE5 1360 aa12.92□□□□□ -0.34
ATP6V0A1-215ENST00000587824 KIF21BO75037 1637 aa12.91□□□□□ -0.34
ATP6V0A1-215ENST00000587824 RANGAP1P46060 587 aaPredicted RBP12.9□□□□□ -0.34
ATP6V0A1-215ENST00000587824 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
ATP6V0A1-215ENST00000587824 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
ATP6V0A1-215ENST00000587824 GOLGA3Q08378 1498 aa12.85□□□□□ -0.35
ATP6V0A1-215ENST00000587824 UACAQ9BZF9 1416 aa12.83□□□□□ -0.36
ATP6V0A1-215ENST00000587824 PLB1Q6P1J6 1458 aa12.83□□□□□ -0.36
ATP6V0A1-215ENST00000587824 ABCC2Q92887 1545 aa12.83□□□□□ -0.36
ATP6V0A1-215ENST00000587824 SAMD9Q5K651 1589 aa12.82□□□□□ -0.36
ATP6V0A1-215ENST00000587824 NPM1P06748 294 aaKnown RBP eCLIP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms