RNA–Protein interactions for RNA: ENST00000587824.5

ATP6V0A1-215, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 4

Gene ATP6V0A1, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-215ENST00000587824 AEBP2Q6ZN18 517 aaPredicted RBP24.92■■□□□ 1.58
ATP6V0A1-215ENST00000587824 CHIC1Q5VXU3 224 aa23.75■■□□□ 1.39
ATP6V0A1-215ENST00000587824 SENP3Q9H4L4 574 aaPredicted RBP21.32■■□□□ 1
ATP6V0A1-215ENST00000587824 PHF23Q9BUL5 403 aaPredicted RBP21■□□□□ 0.95
ATP6V0A1-215ENST00000587824 FOXD1Q16676 465 aa19.82■□□□□ 0.76
ATP6V0A1-215ENST00000587824 PLPPR3Q6T4P5 718 aa19■□□□□ 0.63
ATP6V0A1-215ENST00000587824 NISCHQ9Y2I1 1504 aa18.92■□□□□ 0.62
ATP6V0A1-215ENST00000587824 MSH5O43196 834 aa18.6■□□□□ 0.57
ATP6V0A1-215ENST00000587824 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
ATP6V0A1-215ENST00000587824 PIAS4Q8N2W9 510 aaPredicted RBP18.5■□□□□ 0.55
ATP6V0A1-215ENST00000587824 ADRA2BP18089 450 aa18.45■□□□□ 0.54
ATP6V0A1-215ENST00000587824 POTEDQ86YR6 584 aa18.03■□□□□ 0.48
ATP6V0A1-215ENST00000587824 SCAF1Q9H7N4 1312 aaKnown RBP16.99■□□□□ 0.31
ATP6V0A1-215ENST00000587824 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
ATP6V0A1-215ENST00000587824 DMRT2Q9Y5R5 561 aa16.91■□□□□ 0.3
ATP6V0A1-215ENST00000587824 CCDC180Q9P1Z9 1646 aa16.8■□□□□ 0.28
ATP6V0A1-215ENST00000587824 PPP4R3CPQ6ZMV5 832 aa16.62■□□□□ 0.25
ATP6V0A1-215ENST00000587824 ABCC9O60706 1549 aa16.57■□□□□ 0.24
ATP6V0A1-215ENST00000587824 CNKSR2Q8WXI2 1034 aa16.35■□□□□ 0.21
ATP6V0A1-215ENST00000587824 HOXD11P31277 338 aaPredicted RBP16.33■□□□□ 0.2
ATP6V0A1-215ENST00000587824 RNF216Q9NWF9 866 aaPredicted RBP16.21■□□□□ 0.19
ATP6V0A1-215ENST00000587824 DCAF8L1A6NGE4 600 aa16.07■□□□□ 0.16
ATP6V0A1-215ENST00000587824 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
ATP6V0A1-215ENST00000587824 DCAF8L2P0C7V8 631 aa15.88■□□□□ 0.13
ATP6V0A1-215ENST00000587824 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
ATP6V0A1-215ENST00000587824 CACNB1Q02641 598 aaPredicted RBP15.86■□□□□ 0.13
ATP6V0A1-215ENST00000587824 RNF39Q9H2S5 420 aa15.86■□□□□ 0.13
ATP6V0A1-215ENST00000587824 RB1CC1Q8TDY2 1594 aa15.84■□□□□ 0.13
ATP6V0A1-215ENST00000587824 NACADO15069 1562 aa15.79■□□□□ 0.12
ATP6V0A1-215ENST00000587824 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
ATP6V0A1-215ENST00000587824 NPM3O75607 178 aaKnown RBP15.76■□□□□ 0.11
ATP6V0A1-215ENST00000587824 C1QBPQ07021 282 aaKnown RBP15.65■□□□□ 0.1
ATP6V0A1-215ENST00000587824 MYO15BQ96JP2 1530 aa15.64■□□□□ 0.09
ATP6V0A1-215ENST00000587824 DCAF1Q9Y4B6 1507 aa15.59■□□□□ 0.09
ATP6V0A1-215ENST00000587824 UNC13AQ9UPW8 1703 aa15.51■□□□□ 0.07
ATP6V0A1-215ENST00000587824 PABPN1Q86U42 306 aaKnown RBP eCLIP15.48■□□□□ 0.07
ATP6V0A1-215ENST00000587824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.46■□□□□ 0.074e-7■■■■□ 24.9
ATP6V0A1-215ENST00000587824 KCNA4P22459 653 aa15.45■□□□□ 0.06
ATP6V0A1-215ENST00000587824 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
ATP6V0A1-215ENST00000587824 BICRAQ9NZM4 1560 aa15.4■□□□□ 0.06
ATP6V0A1-215ENST00000587824 U3KPZ7 1027 aaPredicted RBP15.17■□□□□ 0.02
ATP6V0A1-215ENST00000587824 SHROOM4Q9ULL8 1493 aa15.14■□□□□ 0.01
ATP6V0A1-215ENST00000587824 SLC4A2P04920 1241 aa15.05■□□□□ -0
ATP6V0A1-215ENST00000587824 EIF4G1Q04637 1599 aaKnown RBP14.99□□□□□ -0.01
ATP6V0A1-215ENST00000587824 CC2D2AQ9P2K1 1620 aa14.95□□□□□ -0.02
ATP6V0A1-215ENST00000587824 SPINK5Q9NQ38 1064 aaPredicted RBP14.9□□□□□ -0.02
ATP6V0A1-215ENST00000587824 CAPN15O75808 1086 aa14.87□□□□□ -0.03
ATP6V0A1-215ENST00000587824 CECR2Q9BXF3 1484 aa14.86□□□□□ -0.03
ATP6V0A1-215ENST00000587824 DSG3P32926 999 aa14.84□□□□□ -0.03
ATP6V0A1-215ENST00000587824 APLP2Q06481 763 aa14.83□□□□□ -0.04
ATP6V0A1-215ENST00000587824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.82□□□□□ -0.04
ATP6V0A1-215ENST00000587824 HNRNPUL2Q1KMD3 747 aaKnown RBP14.82□□□□□ -0.04
ATP6V0A1-215ENST00000587824 SMARCA4P51532 1647 aa14.71□□□□□ -0.05
ATP6V0A1-215ENST00000587824 SAMD1Q6SPF0 538 aaPredicted RBP14.71□□□□□ -0.05
ATP6V0A1-215ENST00000587824 ZNF219Q9P2Y4 722 aaPredicted RBP14.69□□□□□ -0.06
ATP6V0A1-215ENST00000587824 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
ATP6V0A1-215ENST00000587824 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
ATP6V0A1-215ENST00000587824 ATAD2BQ9ULI0 1458 aa14.63□□□□□ -0.07
ATP6V0A1-215ENST00000587824 TRHP20396 242 aaPredicted RBP14.62□□□□□ -0.07
ATP6V0A1-215ENST00000587824 MYCNP04198 464 aaPredicted RBP14.61□□□□□ -0.07
ATP6V0A1-215ENST00000587824 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
ATP6V0A1-215ENST00000587824 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
ATP6V0A1-215ENST00000587824 SMARCA2P51531 1590 aa14.57□□□□□ -0.08
ATP6V0A1-215ENST00000587824 HMGXB3Q12766 1538 aa14.52□□□□□ -0.08
ATP6V0A1-215ENST00000587824 BAZ1BQ9UIG0 1483 aaKnown RBP14.51□□□□□ -0.09
ATP6V0A1-215ENST00000587824 PEG3Q9GZU2 1588 aa14.51□□□□□ -0.09
ATP6V0A1-215ENST00000587824 ABCB7O75027 752 aa14.49□□□□□ -0.09
ATP6V0A1-215ENST00000587824 WIZO95785 1651 aa14.47□□□□□ -0.09
ATP6V0A1-215ENST00000587824 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
ATP6V0A1-215ENST00000587824 RSF1Q96T23 1441 aaPredicted RBP14.42□□□□□ -0.1
ATP6V0A1-215ENST00000587824 NESP48681 1621 aa14.34□□□□□ -0.11
ATP6V0A1-215ENST00000587824 TOP2AP11388 1531 aaKnown RBP14.3□□□□□ -0.12
ATP6V0A1-215ENST00000587824 POLA2Q14181 598 aa14.28□□□□□ -0.12
ATP6V0A1-215ENST00000587824 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
ATP6V0A1-215ENST00000587824 ZBTB22O15209 634 aa14.2□□□□□ -0.14
ATP6V0A1-215ENST00000587824 ATF5Q9Y2D1 282 aaPredicted RBP14.2□□□□□ -0.14
ATP6V0A1-215ENST00000587824 LAMC3Q9Y6N6 1575 aa14.2□□□□□ -0.14
ATP6V0A1-215ENST00000587824 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
ATP6V0A1-215ENST00000587824 CADPSQ9ULU8 1353 aa14.17□□□□□ -0.14
ATP6V0A1-215ENST00000587824 POTEHQ6S545 545 aa14.14□□□□□ -0.15
ATP6V0A1-215ENST00000587824 KIF21AQ7Z4S6 1674 aa14.14□□□□□ -0.15
ATP6V0A1-215ENST00000587824 CCDC88BA6NC98 1476 aa14.12□□□□□ -0.15
ATP6V0A1-215ENST00000587824 PDS5BQ9NTI5 1447 aa14.11□□□□□ -0.15
ATP6V0A1-215ENST00000587824 SUPT5HO00267 1087 aaKnown RBP14.1□□□□□ -0.15
ATP6V0A1-215ENST00000587824 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
ATP6V0A1-215ENST00000587824 ATXN8OSP0DMR3 200 aa14.09□□□□□ -0.15
ATP6V0A1-215ENST00000587824 CFTRP13569 1480 aa14.08□□□□□ -0.16
ATP6V0A1-215ENST00000587824 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
ATP6V0A1-215ENST00000587824 CUX2O14529 1486 aa14.06□□□□□ -0.16
ATP6V0A1-215ENST00000587824 FANCD2Q9BXW9 1451 aa14.05□□□□□ -0.16
ATP6V0A1-215ENST00000587824 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
ATP6V0A1-215ENST00000587824 MRC2Q9UBG0 1479 aa14.01□□□□□ -0.17
ATP6V0A1-215ENST00000587824 WDR62O43379 1518 aa13.96□□□□□ -0.17
ATP6V0A1-215ENST00000587824 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
ATP6V0A1-215ENST00000587824 URB2Q14146 1524 aaKnown RBP13.93□□□□□ -0.18
ATP6V0A1-215ENST00000587824 AKT1S1Q96B36 256 aa13.87□□□□□ -0.19
ATP6V0A1-215ENST00000587824 TOPBP1Q92547 1522 aa13.82□□□□□ -0.2
ATP6V0A1-215ENST00000587824 CHRDL2Q6WN34 429 aa13.82□□□□□ -0.2
ATP6V0A1-215ENST00000587824 OSCARQ8IYS5 282 aa13.79□□□□□ -0.2
ATP6V0A1-215ENST00000587824 DNMBPQ6XZF7 1577 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms