RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
RDH13-209ENST00000587721 IGF1RP08069 1367 aa23.94■■□□□ 1.42
RDH13-209ENST00000587721 AEBP2Q6ZN18 517 aaPredicted RBP23.92■■□□□ 1.42
RDH13-209ENST00000587721 KIAA0586Q9BVV6 1533 aa23.9■■□□□ 1.42
RDH13-209ENST00000587721 CUL7Q14999 1698 aa23.89■■□□□ 1.41
RDH13-209ENST00000587721 CARMIL1Q5VZK9 1371 aa23.82■■□□□ 1.4
RDH13-209ENST00000587721 FAM69CQ0P6D2 419 aa23.79■■□□□ 1.4
RDH13-209ENST00000587721 ABCC10Q5T3U5 1492 aa23.76■■□□□ 1.39
RDH13-209ENST00000587721 MAPKBP1O60336 1514 aa23.75■■□□□ 1.39
RDH13-209ENST00000587721 KIF13AQ9H1H9 1805 aa23.74■■□□□ 1.39
RDH13-209ENST00000587721 CARMIL2Q6F5E8 1435 aa23.73■■□□□ 1.39
RDH13-209ENST00000587721 PTPRGP23470 1445 aa23.72■■□□□ 1.39
RDH13-209ENST00000587721 ADCY10Q96PN6 1610 aa23.71■■□□□ 1.39
RDH13-209ENST00000587721 TNIKQ9UKE5 1360 aa23.67■■□□□ 1.38
RDH13-209ENST00000587721 TTBK1Q5TCY1 1321 aaPredicted RBP23.67■■□□□ 1.38
RDH13-209ENST00000587721 DIP2BQ9P265 1576 aa23.64■■□□□ 1.37
RDH13-209ENST00000587721 IQGAP2Q13576 1575 aa23.63■■□□□ 1.37
RDH13-209ENST00000587721 RAPGEF2Q9Y4G8 1499 aa23.59■■□□□ 1.37
RDH13-209ENST00000587721 ABCC2Q92887 1545 aa23.56■■□□□ 1.36
RDH13-209ENST00000587721 UACAQ9BZF9 1416 aa23.52■■□□□ 1.36
RDH13-209ENST00000587721 UHRF1BP1LA0JNW5 1464 aa23.51■■□□□ 1.35
RDH13-209ENST00000587721 PLB1Q6P1J6 1458 aa23.51■■□□□ 1.35
RDH13-209ENST00000587721 DISP1Q96F81 1524 aa23.49■■□□□ 1.35
RDH13-209ENST00000587721 ASXL2Q76L83 1435 aa23.49■■□□□ 1.35
RDH13-209ENST00000587721 KDM6BO15054 1643 aa23.48■■□□□ 1.35
RDH13-209ENST00000587721 UGGT2Q9NYU1 1516 aa23.48■■□□□ 1.35
RDH13-209ENST00000587721 TSPOAP1O95153 1857 aa23.44■■□□□ 1.34
RDH13-209ENST00000587721 GLI2P10070 1586 aa23.4■■□□□ 1.34
RDH13-209ENST00000587721 KDM5BQ9UGL1 1544 aa23.39■■□□□ 1.34
RDH13-209ENST00000587721 KIAA0556O60303 1618 aa23.39■■□□□ 1.33
RDH13-209ENST00000587721 GOLGA3Q08378 1498 aa23.36■■□□□ 1.33
RDH13-209ENST00000587721 FAM9AQ8IZU1 332 aaPredicted RBP23.36■■□□□ 1.33
RDH13-209ENST00000587721 EPRSP07814 1512 aaKnown RBP23.33■■□□□ 1.32
RDH13-209ENST00000587721 CTTNBP2Q8WZ74 1663 aa23.3■■□□□ 1.32
RDH13-209ENST00000587721 TEX14Q8IWB6 1497 aa23.3■■□□□ 1.32
RDH13-209ENST00000587721 ZCCHC11Q5TAX3 1644 aaKnown RBP23.3■■□□□ 1.32
RDH13-209ENST00000587721 PRXQ9BXM0 1461 aa23.29■■□□□ 1.32
RDH13-209ENST00000587721 KDM4FA0A1W2PPD8 638 aa23.27■■□□□ 1.32
RDH13-209ENST00000587721 WDR7Q9Y4E6 1490 aa23.25■■□□□ 1.31
RDH13-209ENST00000587721 PPRC1Q5VV67 1664 aaKnown RBP23.24■■□□□ 1.31
RDH13-209ENST00000587721 MAP3K4Q9Y6R4 1608 aa23.23■■□□□ 1.31
RDH13-209ENST00000587721 CSRNP3Q8WYN3 585 aa23.19■■□□□ 1.3
RDH13-209ENST00000587721 KCNH8Q96L42 1107 aa23.19■■□□□ 1.3
RDH13-209ENST00000587721 ABCA8O94911 1581 aa23.18■■□□□ 1.3
RDH13-209ENST00000587721 COL17A1Q9UMD9 1497 aaPredicted RBP23.15■■□□□ 1.3
RDH13-209ENST00000587721 CD109Q6YHK3 1445 aa23.15■■□□□ 1.3
RDH13-209ENST00000587721 P3H3Q8IVL6 736 aa23.12■■□□□ 1.29
RDH13-209ENST00000587721 MAGI3Q5TCQ9 1506 aa23.1■■□□□ 1.29
RDH13-209ENST00000587721 ADGRL1O94910 1474 aa23.08■■□□□ 1.29
RDH13-209ENST00000587721 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.29
RDH13-209ENST00000587721 EEA1Q15075 1411 aa23.08■■□□□ 1.28
RDH13-209ENST00000587721 ARID3CA6NKF2 412 aa23.05■■□□□ 1.28
RDH13-209ENST00000587721 ATP10BO94823 1461 aa23.02■■□□□ 1.28
RDH13-209ENST00000587721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.01■■□□□ 1.27
RDH13-209ENST00000587721 HNRNPUL2Q1KMD3 747 aaKnown RBP23.01■■□□□ 1.27
RDH13-209ENST00000587721 SAMD9Q5K651 1589 aa22.98■■□□□ 1.27
RDH13-209ENST00000587721 RANGAP1P46060 587 aaPredicted RBP22.97■■□□□ 1.27
RDH13-209ENST00000587721 PHLDB1Q86UU1 1377 aa22.96■■□□□ 1.27
RDH13-209ENST00000587721 RAPGEF6Q8TEU7 1601 aa22.93■■□□□ 1.26
RDH13-209ENST00000587721 ARAP3Q8WWN8 1544 aa22.92■■□□□ 1.26
RDH13-209ENST00000587721 ABCA9Q8IUA7 1624 aa22.89■■□□□ 1.25
RDH13-209ENST00000587721 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
RDH13-209ENST00000587721 FHOD3Q2V2M9 1422 aa22.87■■□□□ 1.25
RDH13-209ENST00000587721 NUP153P49790 1475 aaKnown RBP22.85■■□□□ 1.25
RDH13-209ENST00000587721 NEO1Q92859 1461 aa22.85■■□□□ 1.25
RDH13-209ENST00000587721 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
RDH13-209ENST00000587721 KIF21BO75037 1637 aa22.81■■□□□ 1.24
RDH13-209ENST00000587721 RAPGEF3O95398 923 aa22.8■■□□□ 1.24
RDH13-209ENST00000587721 UBTFP17480 764 aaKnown RBP22.77■■□□□ 1.24
RDH13-209ENST00000587721 HECW2Q9P2P5 1572 aa22.75■■□□□ 1.23
RDH13-209ENST00000587721 ARID4BQ4LE39 1312 aaPredicted RBP22.72■■□□□ 1.23
RDH13-209ENST00000587721 DENND4BO75064 1496 aaPredicted RBP22.69■■□□□ 1.22
RDH13-209ENST00000587721 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
RDH13-209ENST00000587721 AKNAQ7Z591 1439 aa22.68■■□□□ 1.22
RDH13-209ENST00000587721 FANCAO15360 1455 aa22.67■■□□□ 1.22
RDH13-209ENST00000587721 ATP1B4Q9UN42 357 aaPredicted RBP22.67■■□□□ 1.22
RDH13-209ENST00000587721 FMN1Q68DA7 1419 aa22.66■■□□□ 1.22
RDH13-209ENST00000587721 CDK11AQ9UQ88 783 aaPredicted RBP22.66■■□□□ 1.22
RDH13-209ENST00000587721 CFAP74Q9C0B2 1584 aa22.66■■□□□ 1.22
RDH13-209ENST00000587721 CHIC1Q5VXU3 224 aa22.65■■□□□ 1.22
RDH13-209ENST00000587721 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.65■■□□□ 1.22
RDH13-209ENST00000587721 ILDR1Q86SU0 546 aaPredicted RBP22.64■■□□□ 1.21
RDH13-209ENST00000587721 FRMPD1Q5SYB0 1578 aa22.63■■□□□ 1.21
RDH13-209ENST00000587721 PTPRMP28827 1452 aa22.62■■□□□ 1.21
RDH13-209ENST00000587721 CDK13Q14004 1512 aaKnown RBP22.61■■□□□ 1.21
RDH13-209ENST00000587721 ADAMTSL3P82987 1691 aa22.6■■□□□ 1.21
RDH13-209ENST00000587721 TTC37Q6PGP7 1564 aa22.58■■□□□ 1.2
RDH13-209ENST00000587721 POGZQ7Z3K3 1410 aa22.57■■□□□ 1.2
RDH13-209ENST00000587721 ARHGEF40Q8TER5 1519 aa22.57■■□□□ 1.2
RDH13-209ENST00000587721 HECW1Q76N89 1606 aa22.57■■□□□ 1.2
RDH13-209ENST00000587721 PLCH2O75038 1416 aa22.57■■□□□ 1.2
RDH13-209ENST00000587721 ARHGAP35Q9NRY4 1499 aa22.56■■□□□ 1.2
RDH13-209ENST00000587721 BCORL1Q5H9F3 1711 aa22.56■■□□□ 1.2
RDH13-209ENST00000587721 MAGI2Q86UL8 1455 aa22.55■■□□□ 1.2
RDH13-209ENST00000587721 RICTORQ6R327 1708 aa22.55■■□□□ 1.2
RDH13-209ENST00000587721 EFCAB2Q5VUJ9 269 aa22.55■■□□□ 1.2
RDH13-209ENST00000587721 SCAPERQ9BY12 1400 aa22.53■■□□□ 1.2
RDH13-209ENST00000587721 ZMYM4Q5VZL5 1548 aa22.52■■□□□ 1.2
RDH13-209ENST00000587721 ZFYVE16Q7Z3T8 1539 aa22.52■■□□□ 1.19
RDH13-209ENST00000587721 MADDQ8WXG6 1647 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms