RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 NPM1P06748 294 aaKnown RBP eCLIP35.15■■■■□ 3.22
CLPTM1-204ENST00000585961 KIF27Q86VH2 1401 aa35.1■■■■□ 3.21
CLPTM1-204ENST00000585961 FAM69CQ0P6D2 419 aa35.07■■■■□ 3.2
CLPTM1-204ENST00000585961 TTBK1Q5TCY1 1321 aaPredicted RBP35.06■■■■□ 3.2
CLPTM1-204ENST00000585961 RUSC2Q8N2Y8 1516 aa35.03■■■■□ 3.2
CLPTM1-204ENST00000585961 KIAA0586Q9BVV6 1533 aa35■■■■□ 3.19
CLPTM1-204ENST00000585961 CARMIL1Q5VZK9 1371 aa34.97■■■■□ 3.19
CLPTM1-204ENST00000585961 KIF13AQ9H1H9 1805 aa34.88■■■■□ 3.17
CLPTM1-204ENST00000585961 ABCC10Q5T3U5 1492 aa34.85■■■■□ 3.17
CLPTM1-204ENST00000585961 CUL7Q14999 1698 aa34.83■■■■□ 3.17
CLPTM1-204ENST00000585961 PTPRGP23470 1445 aa34.83■■■■□ 3.17
CLPTM1-204ENST00000585961 ADCY10Q96PN6 1610 aa34.83■■■■□ 3.17
CLPTM1-204ENST00000585961 MAPKBP1O60336 1514 aa34.74■■■■□ 3.15
CLPTM1-204ENST00000585961 TNIKQ9UKE5 1360 aa34.7■■■■□ 3.15
CLPTM1-204ENST00000585961 CARMIL2Q6F5E8 1435 aa34.7■■■■□ 3.15
CLPTM1-204ENST00000585961 DIP2BQ9P265 1576 aa34.66■■■■□ 3.14
CLPTM1-204ENST00000585961 IQGAP2Q13576 1575 aa34.56■■■■□ 3.12
CLPTM1-204ENST00000585961 TSPOAP1O95153 1857 aa34.54■■■■□ 3.12
CLPTM1-204ENST00000585961 RAPGEF2Q9Y4G8 1499 aa34.53■■■■□ 3.12
CLPTM1-204ENST00000585961 ABCC2Q92887 1545 aa34.51■■■■□ 3.12
CLPTM1-204ENST00000585961 ASXL2Q76L83 1435 aa34.5■■■■□ 3.11
CLPTM1-204ENST00000585961 DISP1Q96F81 1524 aa34.5■■■■□ 3.11
CLPTM1-204ENST00000585961 UACAQ9BZF9 1416 aa34.49■■■■□ 3.11
CLPTM1-204ENST00000585961 KDM4FA0A1W2PPD8 638 aa34.44■■■■□ 3.1
CLPTM1-204ENST00000585961 KDM6BO15054 1643 aa34.43■■■■□ 3.1
CLPTM1-204ENST00000585961 PLB1Q6P1J6 1458 aa34.41■■■■□ 3.1
CLPTM1-204ENST00000585961 UHRF1BP1LA0JNW5 1464 aa34.39■■■■□ 3.1
CLPTM1-204ENST00000585961 UGGT2Q9NYU1 1516 aa34.35■■■■□ 3.09
CLPTM1-204ENST00000585961 KDM5BQ9UGL1 1544 aa34.26■■■■□ 3.08
CLPTM1-204ENST00000585961 GLI2P10070 1586 aa34.24■■■■□ 3.07
CLPTM1-204ENST00000585961 EPRSP07814 1512 aaKnown RBP34.24■■■■□ 3.07
CLPTM1-204ENST00000585961 KIAA0556O60303 1618 aa34.23■■■■□ 3.07
CLPTM1-204ENST00000585961 KCNH8Q96L42 1107 aa34.23■■■■□ 3.07
CLPTM1-204ENST00000585961 P3H3Q8IVL6 736 aa34.2■■■■□ 3.07
CLPTM1-204ENST00000585961 COL17A1Q9UMD9 1497 aaPredicted RBP34.17■■■■□ 3.06
CLPTM1-204ENST00000585961 PPRC1Q5VV67 1664 aaKnown RBP34.16■■■■□ 3.06
CLPTM1-204ENST00000585961 ZCCHC11Q5TAX3 1644 aaKnown RBP34.16■■■■□ 3.06
CLPTM1-204ENST00000585961 ARID3CA6NKF2 412 aa34.14■■■■□ 3.06
CLPTM1-204ENST00000585961 PRXQ9BXM0 1461 aa34.11■■■■□ 3.05
CLPTM1-204ENST00000585961 GOLGA3Q08378 1498 aa34.09■■■■□ 3.05
CLPTM1-204ENST00000585961 WDR7Q9Y4E6 1490 aa34.06■■■■□ 3.04
CLPTM1-204ENST00000585961 CSRNP3Q8WYN3 585 aa34.04■■■■□ 3.04
CLPTM1-204ENST00000585961 MAP3K4Q9Y6R4 1608 aa34.04■■■■□ 3.04
CLPTM1-204ENST00000585961 CTTNBP2Q8WZ74 1663 aa34.03■■■■□ 3.04
CLPTM1-204ENST00000585961 TEX14Q8IWB6 1497 aa34.02■■■■□ 3.04
CLPTM1-204ENST00000585961 FAM9AQ8IZU1 332 aaPredicted RBP34.02■■■■□ 3.04
CLPTM1-204ENST00000585961 CD109Q6YHK3 1445 aa33.99■■■■□ 3.03
CLPTM1-204ENST00000585961 RANGAP1P46060 587 aaPredicted RBP33.99■■■■□ 3.03
CLPTM1-204ENST00000585961 ABCA8O94911 1581 aa33.97■■■■□ 3.03
CLPTM1-204ENST00000585961 ADGRL1O94910 1474 aa33.93■■■■□ 3.02
CLPTM1-204ENST00000585961 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.85■■■■□ 3.01
CLPTM1-204ENST00000585961 HNRNPUL2Q1KMD3 747 aaKnown RBP33.85■■■■□ 3.01
CLPTM1-204ENST00000585961 ATP10BO94823 1461 aa33.84■■■■□ 3.01
CLPTM1-204ENST00000585961 MAGI3Q5TCQ9 1506 aa33.82■■■■□ 3
CLPTM1-204ENST00000585961 CFAP43Q8NDM7 1665 aa33.73■■■□□ 2.99
CLPTM1-204ENST00000585961 EHMT2Q96KQ7 1210 aa33.69■■■□□ 2.98
CLPTM1-204ENST00000585961 RAPGEF3O95398 923 aa33.66■■■□□ 2.98
CLPTM1-204ENST00000585961 FHOD3Q2V2M9 1422 aa33.61■■■□□ 2.97
CLPTM1-204ENST00000585961 SAMD9Q5K651 1589 aa33.6■■■□□ 2.97
CLPTM1-204ENST00000585961 EEA1Q15075 1411 aa33.59■■■□□ 2.97
CLPTM1-204ENST00000585961 PLEKHD1A6NEE1 506 aa33.57■■■□□ 2.96
CLPTM1-204ENST00000585961 ILDR1Q86SU0 546 aaPredicted RBP33.57■■■□□ 2.96
CLPTM1-204ENST00000585961 ARAP3Q8WWN8 1544 aa33.56■■■□□ 2.96
CLPTM1-204ENST00000585961 RAPGEF6Q8TEU7 1601 aa33.56■■■□□ 2.96
CLPTM1-204ENST00000585961 NUP153P49790 1475 aaKnown RBP33.51■■■□□ 2.96
CLPTM1-204ENST00000585961 PHLDB1Q86UU1 1377 aa33.5■■■□□ 2.95
CLPTM1-204ENST00000585961 ABCA9Q8IUA7 1624 aa33.48■■■□□ 2.95
CLPTM1-204ENST00000585961 UBTFP17480 764 aaKnown RBP33.47■■■□□ 2.95
CLPTM1-204ENST00000585961 HECW2Q9P2P5 1572 aa33.46■■■□□ 2.95
CLPTM1-204ENST00000585961 KIF21BO75037 1637 aa33.46■■■□□ 2.95
CLPTM1-204ENST00000585961 ATP1B4Q9UN42 357 aaPredicted RBP33.45■■■□□ 2.95
CLPTM1-204ENST00000585961 ARID4BQ4LE39 1312 aaPredicted RBP33.44■■■□□ 2.94
CLPTM1-204ENST00000585961 NEO1Q92859 1461 aa33.39■■■□□ 2.94
CLPTM1-204ENST00000585961 CHIC1Q5VXU3 224 aa33.33■■■□□ 2.93
CLPTM1-204ENST00000585961 AKNAQ7Z591 1439 aa33.29■■■□□ 2.92
CLPTM1-204ENST00000585961 DENND4BO75064 1496 aaPredicted RBP33.25■■■□□ 2.91
CLPTM1-204ENST00000585961 PLPPR3Q6T4P5 718 aa33.24■■■□□ 2.91
CLPTM1-204ENST00000585961 PTPRMP28827 1452 aa33.24■■■□□ 2.91
CLPTM1-204ENST00000585961 EFCAB5A4FU69 1503 aa33.23■■■□□ 2.91
CLPTM1-204ENST00000585961 CDK13Q14004 1512 aaKnown RBP33.23■■■□□ 2.91
CLPTM1-204ENST00000585961 FANCAO15360 1455 aa33.23■■■□□ 2.91
CLPTM1-204ENST00000585961 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.23■■■□□ 2.91
CLPTM1-204ENST00000585961 FRMPD1Q5SYB0 1578 aa33.22■■■□□ 2.91
CLPTM1-204ENST00000585961 ADAMTSL3P82987 1691 aa33.17■■■□□ 2.9
CLPTM1-204ENST00000585961 MLECQ14165 292 aa33.15■■■□□ 2.9
CLPTM1-204ENST00000585961 TTC37Q6PGP7 1564 aa33.12■■■□□ 2.89
CLPTM1-204ENST00000585961 CDK11AQ9UQ88 783 aaPredicted RBP33.11■■■□□ 2.89
CLPTM1-204ENST00000585961 ARHGAP35Q9NRY4 1499 aa33.09■■■□□ 2.89
CLPTM1-204ENST00000585961 PLCH2O75038 1416 aa33.09■■■□□ 2.89
CLPTM1-204ENST00000585961 SCAPERQ9BY12 1400 aa33.09■■■□□ 2.89
CLPTM1-204ENST00000585961 BCORL1Q5H9F3 1711 aa33.08■■■□□ 2.89
CLPTM1-204ENST00000585961 EFCAB2Q5VUJ9 269 aa33.08■■■□□ 2.89
CLPTM1-204ENST00000585961 FMN1Q68DA7 1419 aa33.08■■■□□ 2.89
CLPTM1-204ENST00000585961 YEATS2Q9ULM3 1422 aa33.08■■■□□ 2.89
CLPTM1-204ENST00000585961 RICTORQ6R327 1708 aa33.05■■■□□ 2.88
CLPTM1-204ENST00000585961 MADDQ8WXG6 1647 aa33.05■■■□□ 2.88
CLPTM1-204ENST00000585961 ARHGEF40Q8TER5 1519 aa33.01■■■□□ 2.87
CLPTM1-204ENST00000585961 CFAP74Q9C0B2 1584 aa33■■■□□ 2.87
CLPTM1-204ENST00000585961 HSPA2P54652 639 aa32.98■■■□□ 2.87
CLPTM1-204ENST00000585961 MYT1LQ9UL68 1186 aa32.98■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms