RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 NISCHQ9Y2I1 1504 aa50.19■■■■■ 5.62
CLPTM1-204ENST00000585961 ABCC9O60706 1549 aa45.33■■■■■ 4.85
CLPTM1-204ENST00000585961 CCDC180Q9P1Z9 1646 aa44.81■■■■■ 4.76
CLPTM1-204ENST00000585961 DCAF8L2P0C7V8 631 aa42.92■■■■■ 4.46
CLPTM1-204ENST00000585961 RB1CC1Q8TDY2 1594 aa42.87■■■■■ 4.45
CLPTM1-204ENST00000585961 DNAJC5BQ9UF47 199 aa42.81■■■■■ 4.44
CLPTM1-204ENST00000585961 NACADO15069 1562 aa42.54■■■■■ 4.4
CLPTM1-204ENST00000585961 PABPN1Q86U42 306 aaKnown RBP eCLIP42.41■■■■■ 4.38
CLPTM1-204ENST00000585961 UNC13AQ9UPW8 1703 aa41.81■■■■■ 4.28
CLPTM1-204ENST00000585961 MYO15BQ96JP2 1530 aa41.81■■■■■ 4.28
CLPTM1-204ENST00000585961 BICRAQ9NZM4 1560 aa41.67■■■■■ 4.26
CLPTM1-204ENST00000585961 ZCCHC6Q5VYS8 1495 aaKnown RBP41.49■■■■■ 4.23
CLPTM1-204ENST00000585961 DCAF1Q9Y4B6 1507 aa41.28■■■■■ 4.2
CLPTM1-204ENST00000585961 SCRIBQ14160 1630 aa41.1■■■■■ 4.17
CLPTM1-204ENST00000585961 SHROOM4Q9ULL8 1493 aa40.87■■■■■ 4.13
CLPTM1-204ENST00000585961 CC2D2AQ9P2K1 1620 aa40.79■■■■■ 4.12
CLPTM1-204ENST00000585961 CECR2Q9BXF3 1484 aa40.78■■■■■ 4.12
CLPTM1-204ENST00000585961 EIF4G1Q04637 1599 aaKnown RBP40.65■■■■■ 4.1
CLPTM1-204ENST00000585961 NCAPD3P42695 1498 aa39.37■■■■□ 3.89
CLPTM1-204ENST00000585961 DNAJC5Q9H3Z4 198 aa39.28■■■■□ 3.88
CLPTM1-204ENST00000585961 ATAD2BQ9ULI0 1458 aa39.28■■■■□ 3.88
CLPTM1-204ENST00000585961 ERCC6Q03468 1493 aa39.11■■■■□ 3.85
CLPTM1-204ENST00000585961 SMARCA4P51532 1647 aa39.1■■■■□ 3.85
CLPTM1-204ENST00000585961 SMARCA2P51531 1590 aa39.04■■■■□ 3.84
CLPTM1-204ENST00000585961 HMGXB3Q12766 1538 aa38.92■■■■□ 3.82
CLPTM1-204ENST00000585961 NESP48681 1621 aa38.91■■■■□ 3.82
CLPTM1-204ENST00000585961 CUX2O14529 1486 aa38.91■■■■□ 3.82
CLPTM1-204ENST00000585961 BAZ1AQ9NRL2 1556 aaPredicted RBP38.89■■■■□ 3.82
CLPTM1-204ENST00000585961 BAZ1BQ9UIG0 1483 aaKnown RBP38.86■■■■□ 3.81
CLPTM1-204ENST00000585961 MROH2BQ7Z745 1585 aa38.74■■■■□ 3.79
CLPTM1-204ENST00000585961 PEG3Q9GZU2 1588 aa38.61■■■■□ 3.77
CLPTM1-204ENST00000585961 LAMC3Q9Y6N6 1575 aa38.39■■■■□ 3.74
CLPTM1-204ENST00000585961 PDS5BQ9NTI5 1447 aa38.33■■■■□ 3.73
CLPTM1-204ENST00000585961 THOC2Q8NI27 1593 aaKnown RBP38.27■■■■□ 3.72
CLPTM1-204ENST00000585961 CADPSQ9ULU8 1353 aa38.27■■■■□ 3.72
CLPTM1-204ENST00000585961 WIZO95785 1651 aa38.23■■■■□ 3.71
CLPTM1-204ENST00000585961 KIF21AQ7Z4S6 1674 aa38.19■■■■□ 3.7
CLPTM1-204ENST00000585961 MRC2Q9UBG0 1479 aa37.95■■■■□ 3.67
CLPTM1-204ENST00000585961 RSF1Q96T23 1441 aaPredicted RBP37.94■■■■□ 3.66
CLPTM1-204ENST00000585961 FANCD2Q9BXW9 1451 aa37.79■■■■□ 3.64
CLPTM1-204ENST00000585961 CEP164Q9UPV0 1460 aa37.78■■■■□ 3.64
CLPTM1-204ENST00000585961 WDR62O43379 1518 aa37.77■■■■□ 3.64
CLPTM1-204ENST00000585961 CFTRP13569 1480 aa37.71■■■■□ 3.63
CLPTM1-204ENST00000585961 TRIM41Q8WV44 630 aa37.68■■■■□ 3.62
CLPTM1-204ENST00000585961 TOP2AP11388 1531 aaKnown RBP37.65■■■■□ 3.62
CLPTM1-204ENST00000585961 URB2Q14146 1524 aaKnown RBP37.47■■■■□ 3.59
CLPTM1-204ENST00000585961 OSCARQ8IYS5 282 aa37.42■■■■□ 3.58
CLPTM1-204ENST00000585961 CCDC88BA6NC98 1476 aa37.4■■■■□ 3.58
CLPTM1-204ENST00000585961 ZNF608Q9ULD9 1512 aaPredicted RBP37.09■■■■□ 3.53
CLPTM1-204ENST00000585961 IFT140Q96RY7 1462 aa37.03■■■■□ 3.52
CLPTM1-204ENST00000585961 PRDM2Q13029 1718 aa37.03■■■■□ 3.52
CLPTM1-204ENST00000585961 TOPBP1Q92547 1522 aa37.03■■■■□ 3.52
CLPTM1-204ENST00000585961 ABCC8Q09428 1581 aa36.88■■■■□ 3.49
CLPTM1-204ENST00000585961 AQRO60306 1485 aaKnown RBP eCLIP36.82■■■■□ 3.48
CLPTM1-204ENST00000585961 DNMBPQ6XZF7 1577 aa36.79■■■■□ 3.48
CLPTM1-204ENST00000585961 FBLN2P98095 1184 aa36.77■■■■□ 3.48
CLPTM1-204ENST00000585961 RIMBP3CA6NJZ7 1639 aa36.69■■■■□ 3.46
CLPTM1-204ENST00000585961 RIMBP3BA6NNM3 1639 aa36.69■■■■□ 3.46
CLPTM1-204ENST00000585961 RIMBP3Q9UFD9 1639 aa36.69■■■■□ 3.46
CLPTM1-204ENST00000585961 EIF4G3O43432 1585 aaKnown RBP36.68■■■■□ 3.46
CLPTM1-204ENST00000585961 RAD54L2Q9Y4B4 1467 aa36.65■■■■□ 3.46
CLPTM1-204ENST00000585961 CYB5RLQ6IPT4 315 aa36.65■■■■□ 3.46
CLPTM1-204ENST00000585961 POLA1P09884 1462 aaPredicted RBP36.64■■■■□ 3.46
CLPTM1-204ENST00000585961 TARBP1Q13395 1621 aaKnown RBP36.63■■■■□ 3.45
CLPTM1-204ENST00000585961 TDRD9Q8NDG6 1382 aaKnown RBP36.62■■■■□ 3.45
CLPTM1-204ENST00000585961 SOGA1O94964 1423 aa36.61■■■■□ 3.45
CLPTM1-204ENST00000585961 ARHGEF11O15085 1522 aa36.59■■■■□ 3.45
CLPTM1-204ENST00000585961 SUPT5HO00267 1087 aaKnown RBP36.52■■■■□ 3.44
CLPTM1-204ENST00000585961 CHD1O14646 1710 aa36.43■■■■□ 3.42
CLPTM1-204ENST00000585961 FGD5Q6ZNL6 1462 aa36.42■■■■□ 3.42
CLPTM1-204ENST00000585961 CHMP7Q8WUX9 453 aaPredicted RBP36.39■■■■□ 3.42
CLPTM1-204ENST00000585961 CUX1P39880 1505 aa36.38■■■■□ 3.41
CLPTM1-204ENST00000585961 SNAPC4Q5SXM2 1469 aa36.31■■■■□ 3.4
CLPTM1-204ENST00000585961 TRHP20396 242 aaPredicted RBP36.29■■■■□ 3.4
CLPTM1-204ENST00000585961 ARAP1Q96P48 1450 aa36.25■■■■□ 3.39
CLPTM1-204ENST00000585961 GRIN2BQ13224 1484 aa36.18■■■■□ 3.38
CLPTM1-204ENST00000585961 MAGI1Q96QZ7 1491 aaPredicted RBP36.11■■■■□ 3.37
CLPTM1-204ENST00000585961 GAPVD1Q14C86 1478 aa36.08■■■■□ 3.37
CLPTM1-204ENST00000585961 WDR97A6NE52 1622 aa36.07■■■■□ 3.36
CLPTM1-204ENST00000585961 SYNJ2O15056 1496 aa36.05■■■■□ 3.36
CLPTM1-204ENST00000585961 CLASP1Q7Z460 1538 aa36.03■■■■□ 3.36
CLPTM1-204ENST00000585961 SYNJ1O43426 1573 aa36.01■■■■□ 3.35
CLPTM1-204ENST00000585961 ABCA10Q8WWZ4 1543 aa35.94■■■■□ 3.34
CLPTM1-204ENST00000585961 WRNQ14191 1432 aaPredicted RBP eCLIP35.88■■■■□ 3.33
CLPTM1-204ENST00000585961 PBRM1Q86U86 1689 aa35.87■■■■□ 3.33
CLPTM1-204ENST00000585961 ABCA5Q8WWZ7 1642 aa35.8■■■■□ 3.32
CLPTM1-204ENST00000585961 GRIN2AQ12879 1464 aa35.69■■■■□ 3.3
CLPTM1-204ENST00000585961 TOP2BQ02880 1626 aa35.66■■■■□ 3.3
CLPTM1-204ENST00000585961 ERCC6L2Q5T890 1561 aa35.61■■■■□ 3.29
CLPTM1-204ENST00000585961 FHAD1B1AJZ9 1412 aa35.6■■■■□ 3.29
CLPTM1-204ENST00000585961 BIVM-ERCC5R4GMW8 1640 aa35.6■■■■□ 3.29
CLPTM1-204ENST00000585961 NUP160Q12769 1436 aa35.57■■■■□ 3.28
CLPTM1-204ENST00000585961 ADAMTS12P58397 1594 aa35.56■■■■□ 3.28
CLPTM1-204ENST00000585961 CEP170Q5SW79 1584 aa35.55■■■■□ 3.28
CLPTM1-204ENST00000585961 JPH4Q96JJ6 628 aa35.47■■■■□ 3.27
CLPTM1-204ENST00000585961 ERICH3Q5RHP9 1530 aa35.45■■■■□ 3.27
CLPTM1-204ENST00000585961 PRG4Q92954 1404 aaPredicted RBP35.37■■■■□ 3.25
CLPTM1-204ENST00000585961 SHROOM2Q13796 1616 aa35.29■■■■□ 3.24
CLPTM1-204ENST00000585961 AEBP2Q6ZN18 517 aaPredicted RBP35.28■■■■□ 3.24
CLPTM1-204ENST00000585961 IGF1RP08069 1367 aa35.22■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 188.1 ms