RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 FAM69CQ0P6D2 419 aa22.98■■□□□ 1.27
CDK5RAP3-234ENST00000584525 IGF1RP08069 1367 aa22.91■■□□□ 1.26
CDK5RAP3-234ENST00000584525 RUSC2Q8N2Y8 1516 aa22.91■■□□□ 1.26
CDK5RAP3-234ENST00000584525 ABCC10Q5T3U5 1492 aa22.88■■□□□ 1.25
CDK5RAP3-234ENST00000584525 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
CDK5RAP3-234ENST00000584525 KIAA0586Q9BVV6 1533 aa22.87■■□□□ 1.25
CDK5RAP3-234ENST00000584525 KIF13AQ9H1H9 1805 aa22.82■■□□□ 1.24
CDK5RAP3-234ENST00000584525 MAPKBP1O60336 1514 aa22.82■■□□□ 1.24
CDK5RAP3-234ENST00000584525 TTBK1Q5TCY1 1321 aaPredicted RBP22.81■■□□□ 1.24
CDK5RAP3-234ENST00000584525 ADCY10Q96PN6 1610 aa22.79■■□□□ 1.24
CDK5RAP3-234ENST00000584525 PTPRGP23470 1445 aa22.76■■□□□ 1.23
CDK5RAP3-234ENST00000584525 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
CDK5RAP3-234ENST00000584525 DIP2BQ9P265 1576 aa22.74■■□□□ 1.23
CDK5RAP3-234ENST00000584525 CUL7Q14999 1698 aa22.72■■□□□ 1.23
CDK5RAP3-234ENST00000584525 CARMIL2Q6F5E8 1435 aa22.69■■□□□ 1.22
CDK5RAP3-234ENST00000584525 TNIKQ9UKE5 1360 aa22.68■■□□□ 1.22
CDK5RAP3-234ENST00000584525 KDM4FA0A1W2PPD8 638 aa22.63■■□□□ 1.21
CDK5RAP3-234ENST00000584525 KDM6BO15054 1643 aa22.63■■□□□ 1.21
CDK5RAP3-234ENST00000584525 ABCC2Q92887 1545 aa22.6■■□□□ 1.21
CDK5RAP3-234ENST00000584525 ASXL2Q76L83 1435 aa22.58■■□□□ 1.21
CDK5RAP3-234ENST00000584525 PLB1Q6P1J6 1458 aa22.56■■□□□ 1.2
CDK5RAP3-234ENST00000584525 IQGAP2Q13576 1575 aa22.55■■□□□ 1.2
CDK5RAP3-234ENST00000584525 UACAQ9BZF9 1416 aa22.55■■□□□ 1.2
CDK5RAP3-234ENST00000584525 TSPOAP1O95153 1857 aa22.53■■□□□ 1.2
CDK5RAP3-234ENST00000584525 UHRF1BP1LA0JNW5 1464 aa22.52■■□□□ 1.2
CDK5RAP3-234ENST00000584525 DISP1Q96F81 1524 aa22.5■■□□□ 1.19
CDK5RAP3-234ENST00000584525 RAPGEF2Q9Y4G8 1499 aa22.48■■□□□ 1.19
CDK5RAP3-234ENST00000584525 GLI2P10070 1586 aa22.46■■□□□ 1.19
CDK5RAP3-234ENST00000584525 EPRSP07814 1512 aaKnown RBP22.41■■□□□ 1.18
CDK5RAP3-234ENST00000584525 UGGT2Q9NYU1 1516 aa22.41■■□□□ 1.18
CDK5RAP3-234ENST00000584525 KDM5BQ9UGL1 1544 aa22.41■■□□□ 1.18
CDK5RAP3-234ENST00000584525 COL17A1Q9UMD9 1497 aaPredicted RBP22.37■■□□□ 1.17
CDK5RAP3-234ENST00000584525 PPRC1Q5VV67 1664 aaKnown RBP22.35■■□□□ 1.17
CDK5RAP3-234ENST00000584525 TEX14Q8IWB6 1497 aa22.34■■□□□ 1.17
CDK5RAP3-234ENST00000584525 KIAA0556O60303 1618 aa22.34■■□□□ 1.17
CDK5RAP3-234ENST00000584525 ADGRL1O94910 1474 aa22.33■■□□□ 1.16
CDK5RAP3-234ENST00000584525 ZCCHC11Q5TAX3 1644 aaKnown RBP22.31■■□□□ 1.16
CDK5RAP3-234ENST00000584525 KCNH8Q96L42 1107 aa22.3■■□□□ 1.16
CDK5RAP3-234ENST00000584525 WDR7Q9Y4E6 1490 aa22.29■■□□□ 1.16
CDK5RAP3-234ENST00000584525 MAP3K4Q9Y6R4 1608 aa22.28■■□□□ 1.16
CDK5RAP3-234ENST00000584525 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
CDK5RAP3-234ENST00000584525 CD109Q6YHK3 1445 aa22.23■■□□□ 1.15
CDK5RAP3-234ENST00000584525 FAM9AQ8IZU1 332 aaPredicted RBP22.21■■□□□ 1.15
CDK5RAP3-234ENST00000584525 ILDR1Q86SU0 546 aaPredicted RBP22.2■■□□□ 1.14
CDK5RAP3-234ENST00000584525 ARID3CA6NKF2 412 aa22.19■■□□□ 1.14
CDK5RAP3-234ENST00000584525 PRXQ9BXM0 1461 aa22.17■■□□□ 1.14
CDK5RAP3-234ENST00000584525 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
CDK5RAP3-234ENST00000584525 ABCA8O94911 1581 aa22.16■■□□□ 1.14
CDK5RAP3-234ENST00000584525 MAGI3Q5TCQ9 1506 aa22.16■■□□□ 1.14
CDK5RAP3-234ENST00000584525 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
CDK5RAP3-234ENST00000584525 CFAP43Q8NDM7 1665 aa22.06■■□□□ 1.12
CDK5RAP3-234ENST00000584525 HECW2Q9P2P5 1572 aa22.05■■□□□ 1.12
CDK5RAP3-234ENST00000584525 ATP10BO94823 1461 aa22.05■■□□□ 1.12
CDK5RAP3-234ENST00000584525 CSRNP3Q8WYN3 585 aa22.04■■□□□ 1.12
CDK5RAP3-234ENST00000584525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.03■■□□□ 1.12
CDK5RAP3-234ENST00000584525 HNRNPUL2Q1KMD3 747 aaKnown RBP22.03■■□□□ 1.12
CDK5RAP3-234ENST00000584525 ARAP3Q8WWN8 1544 aa22■■□□□ 1.11
CDK5RAP3-234ENST00000584525 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
CDK5RAP3-234ENST00000584525 RAPGEF3O95398 923 aa21.98■■□□□ 1.11
CDK5RAP3-234ENST00000584525 PHLDB1Q86UU1 1377 aa21.97■■□□□ 1.11
CDK5RAP3-234ENST00000584525 KIF21BO75037 1637 aa21.91■■□□□ 1.1
CDK5RAP3-234ENST00000584525 ARID4BQ4LE39 1312 aaPredicted RBP21.89■■□□□ 1.1
CDK5RAP3-234ENST00000584525 ABCA9Q8IUA7 1624 aa21.88■■□□□ 1.09
CDK5RAP3-234ENST00000584525 NEO1Q92859 1461 aa21.88■■□□□ 1.09
CDK5RAP3-234ENST00000584525 SAMD9Q5K651 1589 aa21.87■■□□□ 1.09
CDK5RAP3-234ENST00000584525 PLEKHD1A6NEE1 506 aa21.87■■□□□ 1.09
CDK5RAP3-234ENST00000584525 RAPGEF6Q8TEU7 1601 aa21.86■■□□□ 1.09
CDK5RAP3-234ENST00000584525 FHOD3Q2V2M9 1422 aa21.85■■□□□ 1.09
CDK5RAP3-234ENST00000584525 NUP153P49790 1475 aaKnown RBP21.84■■□□□ 1.09
CDK5RAP3-234ENST00000584525 PTPRMP28827 1452 aa21.83■■□□□ 1.09
CDK5RAP3-234ENST00000584525 EEA1Q15075 1411 aa21.81■■□□□ 1.08
CDK5RAP3-234ENST00000584525 DENND4BO75064 1496 aaPredicted RBP21.76■■□□□ 1.07
CDK5RAP3-234ENST00000584525 ADAMTSL3P82987 1691 aa21.75■■□□□ 1.07
CDK5RAP3-234ENST00000584525 AKNAQ7Z591 1439 aa21.74■■□□□ 1.07
CDK5RAP3-234ENST00000584525 FBXO41Q8TF61 875 aa21.74■■□□□ 1.07
CDK5RAP3-234ENST00000584525 FRMPD1Q5SYB0 1578 aa21.74■■□□□ 1.07
CDK5RAP3-234ENST00000584525 FANCAO15360 1455 aa21.71■■□□□ 1.07
CDK5RAP3-234ENST00000584525 PLPPR3Q6T4P5 718 aa21.71■■□□□ 1.07
CDK5RAP3-234ENST00000584525 EHMT2Q96KQ7 1210 aa21.69■■□□□ 1.06
CDK5RAP3-234ENST00000584525 ATP1B4Q9UN42 357 aaPredicted RBP21.68■■□□□ 1.06
CDK5RAP3-234ENST00000584525 BCORL1Q5H9F3 1711 aa21.67■■□□□ 1.06
CDK5RAP3-234ENST00000584525 MADDQ8WXG6 1647 aa21.66■■□□□ 1.06
CDK5RAP3-234ENST00000584525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.66■■□□□ 1.06
CDK5RAP3-234ENST00000584525 EFCAB5A4FU69 1503 aa21.65■■□□□ 1.06
CDK5RAP3-234ENST00000584525 ARHGEF40Q8TER5 1519 aa21.65■■□□□ 1.06
CDK5RAP3-234ENST00000584525 POGZQ7Z3K3 1410 aa21.65■■□□□ 1.06
CDK5RAP3-234ENST00000584525 UBTFP17480 764 aaKnown RBP21.65■■□□□ 1.06
CDK5RAP3-234ENST00000584525 MLECQ14165 292 aa21.64■■□□□ 1.05
CDK5RAP3-234ENST00000584525 CHIC1Q5VXU3 224 aa21.64■■□□□ 1.05
CDK5RAP3-234ENST00000584525 PCF11O94913 1555 aaKnown RBP21.63■■□□□ 1.05
CDK5RAP3-234ENST00000584525 LMTK3Q96Q04 1460 aa21.63■■□□□ 1.05
CDK5RAP3-234ENST00000584525 YEATS2Q9ULM3 1422 aa21.62■■□□□ 1.05
CDK5RAP3-234ENST00000584525 CDK13Q14004 1512 aaKnown RBP21.61■■□□□ 1.05
CDK5RAP3-234ENST00000584525 HSPA2P54652 639 aa21.61■■□□□ 1.05
CDK5RAP3-234ENST00000584525 CFAP74Q9C0B2 1584 aa21.61■■□□□ 1.05
CDK5RAP3-234ENST00000584525 SCAPERQ9BY12 1400 aa21.6■■□□□ 1.05
CDK5RAP3-234ENST00000584525 TTC37Q6PGP7 1564 aa21.6■■□□□ 1.05
CDK5RAP3-234ENST00000584525 PLCH2O75038 1416 aa21.59■■□□□ 1.05
CDK5RAP3-234ENST00000584525 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
CDK5RAP3-234ENST00000584525 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms