RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 SHROOM2Q13796 1616 aa21.51■■□□□ 1.03
ERBB2-215ENST00000583391 GOLGA3Q08378 1498 aa21.49■■□□□ 1.03
ERBB2-215ENST00000583391 KIAA0586Q9BVV6 1533 aa21.49■■□□□ 1.03
ERBB2-215ENST00000583391 RIMBP3CA6NJZ7 1639 aa21.45■■□□□ 1.02
ERBB2-215ENST00000583391 RIMBP3BA6NNM3 1639 aa21.45■■□□□ 1.02
ERBB2-215ENST00000583391 RIMBP3Q9UFD9 1639 aa21.45■■□□□ 1.02
ERBB2-215ENST00000583391 EHMT2Q96KQ7 1210 aa21.45■■□□□ 1.02
ERBB2-215ENST00000583391 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
ERBB2-215ENST00000583391 DNAJC5Q9H3Z4 198 aa21.42■■□□□ 1.02
ERBB2-215ENST00000583391 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
ERBB2-215ENST00000583391 UGGT2Q9NYU1 1516 aa21.34■■□□□ 1.01
ERBB2-215ENST00000583391 PRG4Q92954 1404 aaPredicted RBP21.34■■□□□ 1.01
ERBB2-215ENST00000583391 UBTFP17480 764 aaKnown RBP21.32■■□□□ 1
ERBB2-215ENST00000583391 JPH4Q96JJ6 628 aa21.32■■□□□ 1
ERBB2-215ENST00000583391 KIAA0556O60303 1618 aa21.32■■□□□ 1
ERBB2-215ENST00000583391 SAMD9Q5K651 1589 aa21.28■■□□□ 1
ERBB2-215ENST00000583391 DISP1Q96F81 1524 aa21.28■■□□□ 1
ERBB2-215ENST00000583391 ARAP1Q96P48 1450 aa21.27■■□□□ 1
ERBB2-215ENST00000583391 CARMIL2Q6F5E8 1435 aa21.24■□□□□ 0.99
ERBB2-215ENST00000583391 RANGAP1P46060 587 aaPredicted RBP21.22■□□□□ 0.99
ERBB2-215ENST00000583391 EFCAB5A4FU69 1503 aa21.21■□□□□ 0.99
ERBB2-215ENST00000583391 TNIKQ9UKE5 1360 aa21.2■□□□□ 0.98
ERBB2-215ENST00000583391 LOC105371045A0A1W2PR82 267 aa21.17■□□□□ 0.98
ERBB2-215ENST00000583391 ARHGAP35Q9NRY4 1499 aa21.12■□□□□ 0.97
ERBB2-215ENST00000583391 FHOD3Q2V2M9 1422 aa21.12■□□□□ 0.97
ERBB2-215ENST00000583391 TTBK1Q5TCY1 1321 aaPredicted RBP21.11■□□□□ 0.97
ERBB2-215ENST00000583391 P3H3Q8IVL6 736 aa21.1■□□□□ 0.97
ERBB2-215ENST00000583391 CYB5RLQ6IPT4 315 aa21.09■□□□□ 0.97
ERBB2-215ENST00000583391 PTPRGP23470 1445 aa21.09■□□□□ 0.97
ERBB2-215ENST00000583391 CEP162Q5TB80 1403 aa21.09■□□□□ 0.97
ERBB2-215ENST00000583391 CLIP1P30622 1438 aa21.08■□□□□ 0.97
ERBB2-215ENST00000583391 ADCY10Q96PN6 1610 aa21.07■□□□□ 0.96
ERBB2-215ENST00000583391 RAPGEF6Q8TEU7 1601 aa21.02■□□□□ 0.96
ERBB2-215ENST00000583391 ABCA8O94911 1581 aa21.02■□□□□ 0.95
ERBB2-215ENST00000583391 ABCC2Q92887 1545 aa21.01■□□□□ 0.95
ERBB2-215ENST00000583391 PLB1Q6P1J6 1458 aa21.01■□□□□ 0.95
ERBB2-215ENST00000583391 UACAQ9BZF9 1416 aa20.98■□□□□ 0.95
ERBB2-215ENST00000583391 PCF11O94913 1555 aaKnown RBP20.96■□□□□ 0.95
ERBB2-215ENST00000583391 UHRF1BP1LA0JNW5 1464 aa20.95■□□□□ 0.94
ERBB2-215ENST00000583391 FMN1Q68DA7 1419 aa20.95■□□□□ 0.94
ERBB2-215ENST00000583391 ZCCHC11Q5TAX3 1644 aaKnown RBP20.94■□□□□ 0.94
ERBB2-215ENST00000583391 HECW1Q76N89 1606 aa20.93■□□□□ 0.94
ERBB2-215ENST00000583391 LRRIQ1Q96JM4 1722 aa20.92■□□□□ 0.94
ERBB2-215ENST00000583391 NUP153P49790 1475 aaKnown RBP20.88■□□□□ 0.93
ERBB2-215ENST00000583391 KDM5BQ9UGL1 1544 aa20.87■□□□□ 0.93
ERBB2-215ENST00000583391 FYCO1Q9BQS8 1478 aa20.84■□□□□ 0.93
ERBB2-215ENST00000583391 MAPKBP1O60336 1514 aa20.83■□□□□ 0.92
ERBB2-215ENST00000583391 CASKIN1Q8WXD9 1431 aa20.82■□□□□ 0.92
ERBB2-215ENST00000583391 ARID3CA6NKF2 412 aa20.81■□□□□ 0.92
ERBB2-215ENST00000583391 CDK13Q14004 1512 aaKnown RBP20.81■□□□□ 0.92
ERBB2-215ENST00000583391 VPS8Q8N3P4 1428 aa20.79■□□□□ 0.92
ERBB2-215ENST00000583391 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
ERBB2-215ENST00000583391 ATP10BO94823 1461 aa20.78■□□□□ 0.92
ERBB2-215ENST00000583391 KIF13AQ9H1H9 1805 aa20.78■□□□□ 0.92
ERBB2-215ENST00000583391 EPRSP07814 1512 aaKnown RBP20.78■□□□□ 0.92
ERBB2-215ENST00000583391 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
ERBB2-215ENST00000583391 CFAP43Q8NDM7 1665 aa20.76■□□□□ 0.91
ERBB2-215ENST00000583391 CCDC18Q5T9S5 1454 aa20.75■□□□□ 0.91
ERBB2-215ENST00000583391 ASXL2Q76L83 1435 aa20.74■□□□□ 0.91
ERBB2-215ENST00000583391 DIP2BQ9P265 1576 aa20.72■□□□□ 0.91
ERBB2-215ENST00000583391 WDR7Q9Y4E6 1490 aa20.71■□□□□ 0.91
ERBB2-215ENST00000583391 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.7■□□□□ 0.9
ERBB2-215ENST00000583391 HNRNPUL2Q1KMD3 747 aaKnown RBP20.7■□□□□ 0.9
ERBB2-215ENST00000583391 TIAM1Q13009 1591 aa20.66■□□□□ 0.9
ERBB2-215ENST00000583391 TSPOAP1O95153 1857 aa20.64■□□□□ 0.9
ERBB2-215ENST00000583391 ABCC10Q5T3U5 1492 aa20.64■□□□□ 0.89
ERBB2-215ENST00000583391 MAGI3Q5TCQ9 1506 aa20.63■□□□□ 0.89
ERBB2-215ENST00000583391 KIF14Q15058 1648 aa20.61■□□□□ 0.89
ERBB2-215ENST00000583391 GLI2P10070 1586 aa20.6■□□□□ 0.89
ERBB2-215ENST00000583391 MAP3K4Q9Y6R4 1608 aa20.6■□□□□ 0.89
ERBB2-215ENST00000583391 TRHP20396 242 aaPredicted RBP20.59■□□□□ 0.89
ERBB2-215ENST00000583391 EHBP1L1Q8N3D4 1523 aa20.58■□□□□ 0.89
ERBB2-215ENST00000583391 ABCA9Q8IUA7 1624 aa20.58■□□□□ 0.89
ERBB2-215ENST00000583391 TROQ12816 1431 aaPredicted RBP20.58■□□□□ 0.88
ERBB2-215ENST00000583391 TTC37Q6PGP7 1564 aa20.58■□□□□ 0.88
ERBB2-215ENST00000583391 PLEKHD1A6NEE1 506 aa20.56■□□□□ 0.88
ERBB2-215ENST00000583391 KCNH8Q96L42 1107 aa20.56■□□□□ 0.88
ERBB2-215ENST00000583391 CDK11AQ9UQ88 783 aaPredicted RBP20.56■□□□□ 0.88
ERBB2-215ENST00000583391 MAP3K1Q13233 1512 aa20.56■□□□□ 0.88
ERBB2-215ENST00000583391 PPRC1Q5VV67 1664 aaKnown RBP20.55■□□□□ 0.88
ERBB2-215ENST00000583391 MYO5CQ9NQX4 1742 aa20.54■□□□□ 0.88
ERBB2-215ENST00000583391 FAM69CQ0P6D2 419 aa20.54■□□□□ 0.88
ERBB2-215ENST00000583391 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.53■□□□□ 0.88
ERBB2-215ENST00000583391 SUPT6HQ7KZ85 1726 aaKnown RBP20.53■□□□□ 0.88
ERBB2-215ENST00000583391 MTUS2Q5JR59 1369 aa20.52■□□□□ 0.88
ERBB2-215ENST00000583391 CDC42BPAQ5VT25 1732 aa20.5■□□□□ 0.87
ERBB2-215ENST00000583391 LRRC9Q6ZRR7 1453 aa20.5■□□□□ 0.87
ERBB2-215ENST00000583391 APLP2Q06481 763 aa20.48■□□□□ 0.87
ERBB2-215ENST00000583391 PREX2Q70Z35 1606 aa20.46■□□□□ 0.87
ERBB2-215ENST00000583391 CDC42BPBQ9Y5S2 1711 aa20.45■□□□□ 0.86
ERBB2-215ENST00000583391 ITSN2Q9NZM3 1697 aa20.45■□□□□ 0.86
ERBB2-215ENST00000583391 CD109Q6YHK3 1445 aa20.44■□□□□ 0.86
ERBB2-215ENST00000583391 KANK4Q5T7N3 995 aaPredicted RBP20.41■□□□□ 0.86
ERBB2-215ENST00000583391 NCOA2Q15596 1464 aa20.41■□□□□ 0.86
ERBB2-215ENST00000583391 CFAP74Q9C0B2 1584 aa20.41■□□□□ 0.86
ERBB2-215ENST00000583391 TEX14Q8IWB6 1497 aa20.39■□□□□ 0.85
ERBB2-215ENST00000583391 ARHGAP5Q13017 1502 aa20.37■□□□□ 0.85
ERBB2-215ENST00000583391 ARAP3Q8WWN8 1544 aa20.37■□□□□ 0.85
ERBB2-215ENST00000583391 PLCH2O75038 1416 aa20.34■□□□□ 0.85
ERBB2-215ENST00000583391 CCNB3Q8WWL7 1395 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms