RNA–Protein interactions for RNA: ENST00000583092.1

PPP4R1-224, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-224ENST00000583092 AEBP2Q6ZN18 517 aaPredicted RBP17.68■□□□□ 0.42
PPP4R1-224ENST00000583092 SHROOM2Q13796 1616 aa17.66■□□□□ 0.42
PPP4R1-224ENST00000583092 CARMIL1Q5VZK9 1371 aa17.62■□□□□ 0.41
PPP4R1-224ENST00000583092 KIAA0586Q9BVV6 1533 aa17.62■□□□□ 0.41
PPP4R1-224ENST00000583092 FAM69CQ0P6D2 419 aa17.58■□□□□ 0.4
PPP4R1-224ENST00000583092 CUL7Q14999 1698 aa17.56■□□□□ 0.4
PPP4R1-224ENST00000583092 TTBK1Q5TCY1 1321 aaPredicted RBP17.55■□□□□ 0.4
PPP4R1-224ENST00000583092 CARMIL2Q6F5E8 1435 aa17.55■□□□□ 0.4
PPP4R1-224ENST00000583092 RUSC2Q8N2Y8 1516 aa17.54■□□□□ 0.4
PPP4R1-224ENST00000583092 PTPRGP23470 1445 aa17.53■□□□□ 0.4
PPP4R1-224ENST00000583092 TNIKQ9UKE5 1360 aa17.48■□□□□ 0.39
PPP4R1-224ENST00000583092 ABCC10Q5T3U5 1492 aa17.46■□□□□ 0.39
PPP4R1-224ENST00000583092 FAM9AQ8IZU1 332 aaPredicted RBP17.45■□□□□ 0.38
PPP4R1-224ENST00000583092 MAPKBP1O60336 1514 aa17.42■□□□□ 0.38
PPP4R1-224ENST00000583092 RAPGEF2Q9Y4G8 1499 aa17.42■□□□□ 0.38
PPP4R1-224ENST00000583092 IQGAP2Q13576 1575 aa17.38■□□□□ 0.37
PPP4R1-224ENST00000583092 ADCY10Q96PN6 1610 aa17.38■□□□□ 0.37
PPP4R1-224ENST00000583092 KIF13AQ9H1H9 1805 aa17.35■□□□□ 0.37
PPP4R1-224ENST00000583092 UACAQ9BZF9 1416 aa17.35■□□□□ 0.37
PPP4R1-224ENST00000583092 ABCC2Q92887 1545 aa17.33■□□□□ 0.37
PPP4R1-224ENST00000583092 PLB1Q6P1J6 1458 aa17.33■□□□□ 0.37
PPP4R1-224ENST00000583092 DIP2BQ9P265 1576 aa17.31■□□□□ 0.36
PPP4R1-224ENST00000583092 UHRF1BP1LA0JNW5 1464 aa17.3■□□□□ 0.36
PPP4R1-224ENST00000583092 ASXL2Q76L83 1435 aa17.3■□□□□ 0.36
PPP4R1-224ENST00000583092 DISP1Q96F81 1524 aa17.27■□□□□ 0.36
PPP4R1-224ENST00000583092 UGGT2Q9NYU1 1516 aa17.26■□□□□ 0.35
PPP4R1-224ENST00000583092 GOLGA3Q08378 1498 aa17.26■□□□□ 0.35
PPP4R1-224ENST00000583092 KDM6BO15054 1643 aa17.23■□□□□ 0.35
PPP4R1-224ENST00000583092 TSPOAP1O95153 1857 aa17.22■□□□□ 0.35
PPP4R1-224ENST00000583092 CSRNP3Q8WYN3 585 aa17.22■□□□□ 0.35
PPP4R1-224ENST00000583092 KDM5BQ9UGL1 1544 aa17.2■□□□□ 0.34
PPP4R1-224ENST00000583092 KIAA0556O60303 1618 aa17.19■□□□□ 0.34
PPP4R1-224ENST00000583092 KCNH8Q96L42 1107 aa17.19■□□□□ 0.34
PPP4R1-224ENST00000583092 GLI2P10070 1586 aa17.18■□□□□ 0.34
PPP4R1-224ENST00000583092 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
PPP4R1-224ENST00000583092 TEX14Q8IWB6 1497 aa17.16■□□□□ 0.34
PPP4R1-224ENST00000583092 EPRSP07814 1512 aaKnown RBP17.16■□□□□ 0.34
PPP4R1-224ENST00000583092 P3H3Q8IVL6 736 aa17.15■□□□□ 0.34
PPP4R1-224ENST00000583092 WDR7Q9Y4E6 1490 aa17.12■□□□□ 0.33
PPP4R1-224ENST00000583092 CTTNBP2Q8WZ74 1663 aa17.11■□□□□ 0.33
PPP4R1-224ENST00000583092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.11■□□□□ 0.33
PPP4R1-224ENST00000583092 HNRNPUL2Q1KMD3 747 aaKnown RBP17.11■□□□□ 0.33
PPP4R1-224ENST00000583092 KDM4FA0A1W2PPD8 638 aa17.1■□□□□ 0.33
PPP4R1-224ENST00000583092 EEA1Q15075 1411 aa17.09■□□□□ 0.33
PPP4R1-224ENST00000583092 ZCCHC11Q5TAX3 1644 aaKnown RBP17.09■□□□□ 0.33
PPP4R1-224ENST00000583092 CD109Q6YHK3 1445 aa17.08■□□□□ 0.32
PPP4R1-224ENST00000583092 ARID3CA6NKF2 412 aa17.08■□□□□ 0.32
PPP4R1-224ENST00000583092 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.32
PPP4R1-224ENST00000583092 ABCA8O94911 1581 aa17.03■□□□□ 0.32
PPP4R1-224ENST00000583092 MAP3K4Q9Y6R4 1608 aa17.02■□□□□ 0.31
PPP4R1-224ENST00000583092 PPRC1Q5VV67 1664 aaKnown RBP16.99■□□□□ 0.31
PPP4R1-224ENST00000583092 MAGI3Q5TCQ9 1506 aa16.99■□□□□ 0.31
PPP4R1-224ENST00000583092 COL17A1Q9UMD9 1497 aaPredicted RBP16.99■□□□□ 0.31
PPP4R1-224ENST00000583092 PLEKHD1A6NEE1 506 aa16.98■□□□□ 0.31
PPP4R1-224ENST00000583092 PHLDB1Q86UU1 1377 aa16.97■□□□□ 0.31
PPP4R1-224ENST00000583092 UBTFP17480 764 aaKnown RBP16.96■□□□□ 0.31
PPP4R1-224ENST00000583092 ATP10BO94823 1461 aa16.96■□□□□ 0.31
PPP4R1-224ENST00000583092 CFAP43Q8NDM7 1665 aa16.94■□□□□ 0.3
PPP4R1-224ENST00000583092 ADGRL1O94910 1474 aa16.93■□□□□ 0.3
PPP4R1-224ENST00000583092 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
PPP4R1-224ENST00000583092 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
PPP4R1-224ENST00000583092 SAMD9Q5K651 1589 aa16.88■□□□□ 0.29
PPP4R1-224ENST00000583092 RAPGEF6Q8TEU7 1601 aa16.88■□□□□ 0.29
PPP4R1-224ENST00000583092 FHOD3Q2V2M9 1422 aa16.87■□□□□ 0.29
PPP4R1-224ENST00000583092 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
PPP4R1-224ENST00000583092 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
PPP4R1-224ENST00000583092 RAPGEF3O95398 923 aa16.84■□□□□ 0.29
PPP4R1-224ENST00000583092 CHIC1Q5VXU3 224 aa16.84■□□□□ 0.29
PPP4R1-224ENST00000583092 ARID4BQ4LE39 1312 aaPredicted RBP16.84■□□□□ 0.29
PPP4R1-224ENST00000583092 NEO1Q92859 1461 aa16.82■□□□□ 0.28
PPP4R1-224ENST00000583092 EFCAB5A4FU69 1503 aa16.81■□□□□ 0.28
PPP4R1-224ENST00000583092 NUP153P49790 1475 aaKnown RBP16.81■□□□□ 0.28
PPP4R1-224ENST00000583092 KIF21BO75037 1637 aa16.8■□□□□ 0.28
PPP4R1-224ENST00000583092 ABCA9Q8IUA7 1624 aa16.8■□□□□ 0.28
PPP4R1-224ENST00000583092 FMN1Q68DA7 1419 aa16.77■□□□□ 0.27
PPP4R1-224ENST00000583092 DENND4BO75064 1496 aaPredicted RBP16.74■□□□□ 0.27
PPP4R1-224ENST00000583092 AKNAQ7Z591 1439 aa16.73■□□□□ 0.27
PPP4R1-224ENST00000583092 EFCAB2Q5VUJ9 269 aa16.72■□□□□ 0.27
PPP4R1-224ENST00000583092 FANCAO15360 1455 aa16.71■□□□□ 0.27
PPP4R1-224ENST00000583092 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
PPP4R1-224ENST00000583092 POGZQ7Z3K3 1410 aa16.68■□□□□ 0.26
PPP4R1-224ENST00000583092 CLIP1P30622 1438 aa16.66■□□□□ 0.26
PPP4R1-224ENST00000583092 CFAP74Q9C0B2 1584 aa16.66■□□□□ 0.26
PPP4R1-224ENST00000583092 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.65■□□□□ 0.26
PPP4R1-224ENST00000583092 HECW2Q9P2P5 1572 aa16.65■□□□□ 0.26
PPP4R1-224ENST00000583092 PLCH2O75038 1416 aa16.65■□□□□ 0.26
PPP4R1-224ENST00000583092 CDK13Q14004 1512 aaKnown RBP16.64■□□□□ 0.25
PPP4R1-224ENST00000583092 SCAPERQ9BY12 1400 aa16.63■□□□□ 0.25
PPP4R1-224ENST00000583092 ARHGAP35Q9NRY4 1499 aa16.63■□□□□ 0.25
PPP4R1-224ENST00000583092 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
PPP4R1-224ENST00000583092 PTPRMP28827 1452 aa16.62■□□□□ 0.25
PPP4R1-224ENST00000583092 ILDR1Q86SU0 546 aaPredicted RBP16.62■□□□□ 0.25
PPP4R1-224ENST00000583092 MAGI2Q86UL8 1455 aa16.61■□□□□ 0.25
PPP4R1-224ENST00000583092 MLECQ14165 292 aa16.61■□□□□ 0.25
PPP4R1-224ENST00000583092 PLPPR3Q6T4P5 718 aa16.61■□□□□ 0.25
PPP4R1-224ENST00000583092 TROQ12816 1431 aaPredicted RBP16.59■□□□□ 0.25
PPP4R1-224ENST00000583092 TTC37Q6PGP7 1564 aa16.57■□□□□ 0.24
PPP4R1-224ENST00000583092 ZFYVE16Q7Z3T8 1539 aa16.56■□□□□ 0.24
PPP4R1-224ENST00000583092 ADAMTSL3P82987 1691 aa16.56■□□□□ 0.24
PPP4R1-224ENST00000583092 FRMPD1Q5SYB0 1578 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms