RNA–Protein interactions for RNA: ENST00000581487.1

CMTM4-205, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

Gene CMTM4, Length 7,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-205ENST00000581487 FAM9BQ8IZU0 186 aa9.9□□□□□ -0.83
CMTM4-205ENST00000581487 ERICH6BQ5W0A0 696 aa9.89□□□□□ -0.83
CMTM4-205ENST00000581487 GOLGA3Q08378 1498 aa9.89□□□□□ -0.83
CMTM4-205ENST00000581487 CCDC136Q96JN2 1154 aa9.87□□□□□ -0.83
CMTM4-205ENST00000581487 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
CMTM4-205ENST00000581487 HIRIP3Q9BW71 556 aaPredicted RBP9.86□□□□□ -0.83
CMTM4-205ENST00000581487 IRX6P78412 446 aaPredicted RBP9.85□□□□□ -0.83
CMTM4-205ENST00000581487 SUPT16HQ9Y5B9 1047 aaKnown RBP9.84□□□□□ -0.83
CMTM4-205ENST00000581487 MRS2Q9HD23 443 aa9.84□□□□□ -0.83
CMTM4-205ENST00000581487 ZRSR1Q15695 479 aaKnown RBP9.82□□□□□ -0.84
CMTM4-205ENST00000581487 ZNF777Q9ULD5 760 aaPredicted RBP9.82□□□□□ -0.84
CMTM4-205ENST00000581487 NCLP19338 710 aaKnown RBP9.82□□□□□ -0.84
CMTM4-205ENST00000581487 CHIC2Q9UKJ5 165 aa9.82□□□□□ -0.84
CMTM4-205ENST00000581487 UPF2Q9HAU5 1272 aaKnown RBP9.81□□□□□ -0.84
CMTM4-205ENST00000581487 WRNQ14191 1432 aaPredicted RBP eCLIP9.81□□□□□ -0.84
CMTM4-205ENST00000581487 RB1CC1Q8TDY2 1594 aa9.8□□□□□ -0.84
CMTM4-205ENST00000581487 ARID4BQ4LE39 1312 aaPredicted RBP9.8□□□□□ -0.84
CMTM4-205ENST00000581487 DDRGK1Q96HY6 314 aa9.78□□□□□ -0.84
CMTM4-205ENST00000581487 CEP164Q9UPV0 1460 aa9.78□□□□□ -0.84
CMTM4-205ENST00000581487 DNTTIP2Q5QJE6 756 aaKnown RBP9.78□□□□□ -0.84
CMTM4-205ENST00000581487 NOP58Q9Y2X3 529 aaKnown RBP9.78□□□□□ -0.84
CMTM4-205ENST00000581487 LAS1LQ9Y4W2 734 aaKnown RBP9.77□□□□□ -0.84
CMTM4-205ENST00000581487 NACADO15069 1562 aa9.76□□□□□ -0.85
CMTM4-205ENST00000581487 EIF4G2P78344 907 aaKnown RBP eCLIP9.76□□□□□ -0.85
CMTM4-205ENST00000581487 TMC1Q8TDI8 760 aa9.76□□□□□ -0.85
CMTM4-205ENST00000581487 MTUS2Q5JR59 1369 aa9.75□□□□□ -0.85
CMTM4-205ENST00000581487 SALL2Q9Y467 1007 aaPredicted RBP9.75□□□□□ -0.85
CMTM4-205ENST00000581487 SOGA1O94964 1423 aa9.75□□□□□ -0.85
CMTM4-205ENST00000581487 NOC3LQ8WTT2 800 aaKnown RBP9.74□□□□□ -0.85
CMTM4-205ENST00000581487 NPHP1O15259 732 aa9.74□□□□□ -0.85
CMTM4-205ENST00000581487 SIN3AQ96ST3 1273 aa9.74□□□□□ -0.85
CMTM4-205ENST00000581487 CECR2Q9BXF3 1484 aa9.74□□□□□ -0.85
CMTM4-205ENST00000581487 APPP05067 770 aa9.74□□□□□ -0.85
CMTM4-205ENST00000581487 VSIG10Q8N0Z9 540 aa9.74□□□□□ -0.85
CMTM4-205ENST00000581487 A0A0U1RQG5 324 aaPredicted RBP9.73□□□□□ -0.85
CMTM4-205ENST00000581487 PPM1GO15355 546 aaPredicted RBP9.73□□□□□ -0.85
CMTM4-205ENST00000581487 RRP12Q5JTH9 1297 aaKnown RBP9.73□□□□□ -0.85
CMTM4-205ENST00000581487 PODXL2Q9NZ53 605 aa9.72□□□□□ -0.85
CMTM4-205ENST00000581487 PLEKHG5O94827 1062 aa9.72□□□□□ -0.85
CMTM4-205ENST00000581487 RRP7BPQ9NSQ0 103 aa9.71□□□□□ -0.86
CMTM4-205ENST00000581487 ARID3AQ99856 593 aa9.71□□□□□ -0.86
CMTM4-205ENST00000581487 PTMAP06454 111 aaKnown RBP9.7□□□□□ -0.86
CMTM4-205ENST00000581487 ESF1Q9H501 851 aaKnown RBP9.69□□□□□ -0.86
CMTM4-205ENST00000581487 PPP4R2Q9NY27 417 aa9.69□□□□□ -0.86
CMTM4-205ENST00000581487 PDE4CQ08493 712 aa9.68□□□□□ -0.86
CMTM4-205ENST00000581487 L1TD1Q5T7N2 865 aaKnown RBP9.68□□□□□ -0.86
CMTM4-205ENST00000581487 PKNOX2Q96KN3 472 aa9.68□□□□□ -0.86
CMTM4-205ENST00000581487 GOLGA2Q08379 1002 aa9.67□□□□□ -0.86
CMTM4-205ENST00000581487 TAOK2Q9UL54 1235 aa9.67□□□□□ -0.86
CMTM4-205ENST00000581487 CCNB3Q8WWL7 1395 aa9.67□□□□□ -0.86
CMTM4-205ENST00000581487 BECN1Q14457 450 aa9.67□□□□□ -0.86
CMTM4-205ENST00000581487 VPS8Q8N3P4 1428 aa9.67□□□□□ -0.86
CMTM4-205ENST00000581487 GOLGA6L6A8MZA4 724 aa9.67□□□□□ -0.86
CMTM4-205ENST00000581487 CCER2I3L3R5 266 aa9.66□□□□□ -0.86
CMTM4-205ENST00000581487 KIAA2012Q0VF49 1180 aa9.66□□□□□ -0.86
CMTM4-205ENST00000581487 CNKSR2Q8WXI2 1034 aa9.66□□□□□ -0.86
CMTM4-205ENST00000581487 TIMELESSQ9UNS1 1208 aa9.66□□□□□ -0.86
CMTM4-205ENST00000581487 TSHZ2Q9NRE2 1034 aa9.66□□□□□ -0.86
CMTM4-205ENST00000581487 PNNQ9H307 717 aaKnown RBP9.66□□□□□ -0.86
CMTM4-205ENST00000581487 RBM19Q9Y4C8 960 aaKnown RBP9.66□□□□□ -0.86
CMTM4-205ENST00000581487 KIF27Q86VH2 1401 aa9.66□□□□□ -0.86
CMTM4-205ENST00000581487 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.65□□□□□ -0.86
CMTM4-205ENST00000581487 KDM2AQ9Y2K7 1162 aa9.65□□□□□ -0.86
CMTM4-205ENST00000581487 HSP90AA2PQ14568 343 aaPredicted RBP9.64□□□□□ -0.87
CMTM4-205ENST00000581487 TNNT3P45378 269 aaPredicted RBP9.64□□□□□ -0.87
CMTM4-205ENST00000581487 TPRNQ4KMQ1 711 aa9.63□□□□□ -0.87
CMTM4-205ENST00000581487 KANK4Q5T7N3 995 aaPredicted RBP9.63□□□□□ -0.87
CMTM4-205ENST00000581487 CCDC88BA6NC98 1476 aa9.63□□□□□ -0.87
CMTM4-205ENST00000581487 SENP3-EIF4A1A0A087X0R7 540 aa9.63□□□□□ -0.87
CMTM4-205ENST00000581487 WDR43Q15061 677 aaKnown RBP eCLIP9.62□□□□□ -0.87
CMTM4-205ENST00000581487 SENP3Q9H4L4 574 aaPredicted RBP9.62□□□□□ -0.87
CMTM4-205ENST00000581487 ISY1Q9ULR0 285 aaKnown RBP9.62□□□□□ -0.87
CMTM4-205ENST00000581487 ZBTB7CA1YPR0 619 aa9.62□□□□□ -0.87
CMTM4-205ENST00000581487 BAZ1AQ9NRL2 1556 aaPredicted RBP9.62□□□□□ -0.87
CMTM4-205ENST00000581487 GOLGA6L22H0YM25 854 aa9.62□□□□□ -0.87
CMTM4-205ENST00000581487 TSPY4P0CV99 314 aa9.61□□□□□ -0.87
CMTM4-205ENST00000581487 TSPY10P0CW01 314 aa9.61□□□□□ -0.87
CMTM4-205ENST00000581487 MSNP26038 577 aaKnown RBP9.61□□□□□ -0.87
CMTM4-205ENST00000581487 MROH2BQ7Z745 1585 aa9.6□□□□□ -0.87
CMTM4-205ENST00000581487 B4GALNT3Q6L9W6 998 aa9.6□□□□□ -0.87
CMTM4-205ENST00000581487 RSPH6AQ9H0K4 717 aa9.59□□□□□ -0.87
CMTM4-205ENST00000581487 HAP1P54257 671 aaPredicted RBP9.59□□□□□ -0.87
CMTM4-205ENST00000581487 BAZ1BQ9UIG0 1483 aaKnown RBP9.59□□□□□ -0.87
CMTM4-205ENST00000581487 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.59□□□□□ -0.87
CMTM4-205ENST00000581487 STAG3Q9UJ98 1225 aa9.58□□□□□ -0.88
CMTM4-205ENST00000581487 SETD5Q9C0A6 1442 aa9.58□□□□□ -0.88
CMTM4-205ENST00000581487 CHAF1AQ13111 956 aaPredicted RBP9.57□□□□□ -0.88
CMTM4-205ENST00000581487 ANO8Q9HCE9 1232 aaPredicted RBP9.56□□□□□ -0.88
CMTM4-205ENST00000581487 AK7Q96M32 723 aa9.56□□□□□ -0.88
CMTM4-205ENST00000581487 SEPT11Q9NVA2 429 aaKnown RBP9.55□□□□□ -0.88
CMTM4-205ENST00000581487 ABCC8Q09428 1581 aa9.55□□□□□ -0.88
CMTM4-205ENST00000581487 RAB3GAP2Q9H2M9 1393 aa9.55□□□□□ -0.88
CMTM4-205ENST00000581487 HSPA5P11021 654 aaKnown RBP9.55□□□□□ -0.88
CMTM4-205ENST00000581487 CARD11Q9BXL7 1154 aa9.55□□□□□ -0.88
CMTM4-205ENST00000581487 MYH16Q9H6N6 1097 aa9.55□□□□□ -0.88
CMTM4-205ENST00000581487 NRDCO43847 1150 aa9.54□□□□□ -0.88
CMTM4-205ENST00000581487 CHGAP10645 457 aaKnown RBP9.54□□□□□ -0.88
CMTM4-205ENST00000581487 AEBP2Q6ZN18 517 aaPredicted RBP9.54□□□□□ -0.88
CMTM4-205ENST00000581487 GOLGA6L4A6NEF3 574 aa9.53□□□□□ -0.88
CMTM4-205ENST00000581487 PPP1R15AO75807 674 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms