RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 DIEXFQ68CQ4 756 aaKnown RBP6.26□□□□□ -1.41
RTTN-206ENST00000581161 MAGI3Q5TCQ9 1506 aa6.26□□□□□ -1.41
RTTN-206ENST00000581161 KIF21AQ7Z4S6 1674 aa6.25□□□□□ -1.41
RTTN-206ENST00000581161 TIAM1Q13009 1591 aa6.25□□□□□ -1.41
RTTN-206ENST00000581161 CUL7Q14999 1698 aa6.25□□□□□ -1.41
RTTN-206ENST00000581161 CTTNBP2Q8WZ74 1663 aa6.24□□□□□ -1.41
RTTN-206ENST00000581161 POLA1P09884 1462 aaPredicted RBP6.24□□□□□ -1.41
RTTN-206ENST00000581161 TOPBP1Q92547 1522 aa6.23□□□□□ -1.41
RTTN-206ENST00000581161 CADPSQ9ULU8 1353 aa6.23□□□□□ -1.41
RTTN-206ENST00000581161 GRIN2BQ13224 1484 aa6.21□□□□□ -1.41
RTTN-206ENST00000581161 WDR62O43379 1518 aa6.2□□□□□ -1.42
RTTN-206ENST00000581161 EFCAB5A4FU69 1503 aa6.2□□□□□ -1.42
RTTN-206ENST00000581161 TCOF1Q13428 1488 aaKnown RBP6.19□□□□□ -1.42
RTTN-206ENST00000581161 FGD5Q6ZNL6 1462 aa6.19□□□□□ -1.42
RTTN-206ENST00000581161 NEFLP07196 543 aa6.19□□□□□ -1.42
RTTN-206ENST00000581161 ADCY10Q96PN6 1610 aa6.19□□□□□ -1.42
RTTN-206ENST00000581161 ADAMTS12P58397 1594 aa6.18□□□□□ -1.42
RTTN-206ENST00000581161 SHROOM2Q13796 1616 aa6.17□□□□□ -1.42
RTTN-206ENST00000581161 UBTFP17480 764 aaKnown RBP6.17□□□□□ -1.42
RTTN-206ENST00000581161 PCF11O94913 1555 aaKnown RBP6.17□□□□□ -1.42
RTTN-206ENST00000581161 UGGT2Q9NYU1 1516 aa6.16□□□□□ -1.42
RTTN-206ENST00000581161 AKNAQ7Z591 1439 aa6.16□□□□□ -1.42
RTTN-206ENST00000581161 RANGAP1P46060 587 aaPredicted RBP6.15□□□□□ -1.42
RTTN-206ENST00000581161 GCC2Q8IWJ2 1684 aa6.15□□□□□ -1.43
RTTN-206ENST00000581161 HNRNPUL2Q1KMD3 747 aaKnown RBP6.14□□□□□ -1.43
RTTN-206ENST00000581161 PBRM1Q86U86 1689 aa6.14□□□□□ -1.43
RTTN-206ENST00000581161 PTPRKQ15262 1439 aa6.14□□□□□ -1.43
RTTN-206ENST00000581161 ZNF316A6NFI3 1004 aaPredicted RBP6.14□□□□□ -1.43
RTTN-206ENST00000581161 DISP1Q96F81 1524 aa6.14□□□□□ -1.43
RTTN-206ENST00000581161 CSRNP3Q8WYN3 585 aa6.13□□□□□ -1.43
RTTN-206ENST00000581161 DHX57Q6P158 1386 aaKnown RBP6.11□□□□□ -1.43
RTTN-206ENST00000581161 FYCO1Q9BQS8 1478 aa6.11□□□□□ -1.43
RTTN-206ENST00000581161 LRRC9Q6ZRR7 1453 aa6.11□□□□□ -1.43
RTTN-206ENST00000581161 POLR1AO95602 1720 aaPredicted RBP6.11□□□□□ -1.43
RTTN-206ENST00000581161 MBD5Q9P267 1494 aa6.11□□□□□ -1.43
RTTN-206ENST00000581161 NESP48681 1621 aa6.11□□□□□ -1.43
RTTN-206ENST00000581161 FANCD2Q9BXW9 1451 aa6.1□□□□□ -1.43
RTTN-206ENST00000581161 KDM6BO15054 1643 aa6.1□□□□□ -1.43
RTTN-206ENST00000581161 CROCC2H7BZ55 1655 aa6.1□□□□□ -1.43
RTTN-206ENST00000581161 CASKIN1Q8WXD9 1431 aa6.09□□□□□ -1.43
RTTN-206ENST00000581161 IQGAP2Q13576 1575 aa6.09□□□□□ -1.43
RTTN-206ENST00000581161 MIER1Q8N108 512 aa6.08□□□□□ -1.44
RTTN-206ENST00000581161 ABCA8O94911 1581 aa6.08□□□□□ -1.44
RTTN-206ENST00000581161 HECW1Q76N89 1606 aa6.08□□□□□ -1.44
RTTN-206ENST00000581161 KDM5DQ9BY66 1539 aa6.07□□□□□ -1.44
RTTN-206ENST00000581161 DNAJC5BQ9UF47 199 aa6.07□□□□□ -1.44
RTTN-206ENST00000581161 NUP160Q12769 1436 aa6.07□□□□□ -1.44
RTTN-206ENST00000581161 MYT1LQ9UL68 1186 aa6.07□□□□□ -1.44
RTTN-206ENST00000581161 CLSPNQ9HAW4 1339 aa6.07□□□□□ -1.44
RTTN-206ENST00000581161 MAGI2Q86UL8 1455 aa6.06□□□□□ -1.44
RTTN-206ENST00000581161 KIF27Q86VH2 1401 aa6.06□□□□□ -1.44
RTTN-206ENST00000581161 CDK11BP21127 795 aaKnown RBP6.05□□□□□ -1.44
RTTN-206ENST00000581161 CDK11AQ9UQ88 783 aaPredicted RBP6.05□□□□□ -1.44
RTTN-206ENST00000581161 PHLDB1Q86UU1 1377 aa6.05□□□□□ -1.44
RTTN-206ENST00000581161 SPATA31E1Q6ZUB1 1445 aa6.05□□□□□ -1.44
RTTN-206ENST00000581161 PTPRGP23470 1445 aa6.05□□□□□ -1.44
RTTN-206ENST00000581161 PTPN23Q9H3S7 1636 aa6.04□□□□□ -1.44
RTTN-206ENST00000581161 ABCC10Q5T3U5 1492 aa6.04□□□□□ -1.44
RTTN-206ENST00000581161 E9PCH4 1651 aa6.04□□□□□ -1.44
RTTN-206ENST00000581161 GAPVD1Q14C86 1478 aa6.04□□□□□ -1.44
RTTN-206ENST00000581161 RAD54L2Q9Y4B4 1467 aa6.03□□□□□ -1.44
RTTN-206ENST00000581161 KIAA0556O60303 1618 aa6.03□□□□□ -1.44
RTTN-206ENST00000581161 CDC42BPAQ5VT25 1732 aa6.03□□□□□ -1.44
RTTN-206ENST00000581161 ADGRL2O95490 1459 aa6.03□□□□□ -1.44
RTTN-206ENST00000581161 CEP170Q5SW79 1584 aa6.02□□□□□ -1.45
RTTN-206ENST00000581161 ZBTB47Q9UFB7 747 aaPredicted RBP6.02□□□□□ -1.45
RTTN-206ENST00000581161 HFM1A2PYH4 1435 aa6.02□□□□□ -1.45
RTTN-206ENST00000581161 EIF4G3O43432 1585 aaKnown RBP6.02□□□□□ -1.45
RTTN-206ENST00000581161 BCORL1Q5H9F3 1711 aa6.02□□□□□ -1.45
RTTN-206ENST00000581161 NEURL4Q96JN8 1562 aa6.01□□□□□ -1.45
RTTN-206ENST00000581161 TEX14Q8IWB6 1497 aa6.01□□□□□ -1.45
RTTN-206ENST00000581161 ARHGEF12Q9NZN5 1544 aa6.01□□□□□ -1.45
RTTN-206ENST00000581161 VWDEQ8N2E2 1590 aa6.01□□□□□ -1.45
RTTN-206ENST00000581161 DNMT1P26358 1616 aaKnown RBP6.01□□□□□ -1.45
RTTN-206ENST00000581161 NCOA2Q15596 1464 aa6.01□□□□□ -1.45
RTTN-206ENST00000581161 NEFMP07197 916 aa6□□□□□ -1.45
RTTN-206ENST00000581161 NUP153P49790 1475 aaKnown RBP6□□□□□ -1.45
RTTN-206ENST00000581161 NAIPQ13075 1403 aa5.99□□□□□ -1.45
RTTN-206ENST00000581161 BCANQ96GW7 911 aa5.99□□□□□ -1.45
RTTN-206ENST00000581161 MAST1Q9Y2H9 1570 aa5.99□□□□□ -1.45
RTTN-206ENST00000581161 KANK4Q5T7N3 995 aaPredicted RBP5.99□□□□□ -1.45
RTTN-206ENST00000581161 ATP1B4Q9UN42 357 aaPredicted RBP5.99□□□□□ -1.45
RTTN-206ENST00000581161 CLASP1Q7Z460 1538 aa5.99□□□□□ -1.45
RTTN-206ENST00000581161 RTL5Q5HYW3 569 aaPredicted RBP5.98□□□□□ -1.45
RTTN-206ENST00000581161 ITGAEP38570 1179 aa5.98□□□□□ -1.45
RTTN-206ENST00000581161 ZNF518AQ6AHZ1 1483 aa5.97□□□□□ -1.45
RTTN-206ENST00000581161 DEPDC5O75140 1603 aa5.97□□□□□ -1.45
RTTN-206ENST00000581161 ATP10AO60312 1499 aa5.96□□□□□ -1.45
RTTN-206ENST00000581161 LAMC1P11047 1609 aa5.96□□□□□ -1.45
RTTN-206ENST00000581161 ZNF608Q9ULD9 1512 aaPredicted RBP5.96□□□□□ -1.46
RTTN-206ENST00000581161 SLC4A1APQ9BWU0 796 aaKnown RBP5.96□□□□□ -1.46
RTTN-206ENST00000581161 EHBP1L1Q8N3D4 1523 aa5.95□□□□□ -1.46
RTTN-206ENST00000581161 MROH1Q8NDA8 1641 aa5.95□□□□□ -1.46
RTTN-206ENST00000581161 KIAA0586Q9BVV6 1533 aa5.95□□□□□ -1.46
RTTN-206ENST00000581161 SUPT16HQ9Y5B9 1047 aaKnown RBP5.95□□□□□ -1.46
RTTN-206ENST00000581161 CARMIL1Q5VZK9 1371 aa5.94□□□□□ -1.46
RTTN-206ENST00000581161 UNC13BO14795 1591 aa5.94□□□□□ -1.46
RTTN-206ENST00000581161 CDC42BPBQ9Y5S2 1711 aa5.94□□□□□ -1.46
RTTN-206ENST00000581161 PDS5BQ9NTI5 1447 aa5.94□□□□□ -1.46
RTTN-206ENST00000581161 CNGB1Q14028 1251 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms