RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 NISCHQ9Y2I1 1504 aa9.1□□□□□ -0.95
RTTN-206ENST00000581161 CCDC180Q9P1Z9 1646 aa7.99□□□□□ -1.13
RTTN-206ENST00000581161 DCAF1Q9Y4B6 1507 aa7.88□□□□□ -1.15
RTTN-206ENST00000581161 ZCCHC6Q5VYS8 1495 aaKnown RBP7.84□□□□□ -1.15
RTTN-206ENST00000581161 MYO15BQ96JP2 1530 aa7.75□□□□□ -1.17
RTTN-206ENST00000581161 EIF4G1Q04637 1599 aaKnown RBP7.48□□□□□ -1.21
RTTN-206ENST00000581161 ABCC9O60706 1549 aa7.37□□□□□ -1.23
RTTN-206ENST00000581161 PEG3Q9GZU2 1588 aa7.23□□□□□ -1.25
RTTN-206ENST00000581161 UNC13AQ9UPW8 1703 aa7.2□□□□□ -1.26
RTTN-206ENST00000581161 BICRAQ9NZM4 1560 aa7.16□□□□□ -1.26
RTTN-206ENST00000581161 NACADO15069 1562 aa7.14□□□□□ -1.27
RTTN-206ENST00000581161 RSF1Q96T23 1441 aaPredicted RBP7.1□□□□□ -1.27
RTTN-206ENST00000581161 BAZ1AQ9NRL2 1556 aaPredicted RBP7.04□□□□□ -1.28
RTTN-206ENST00000581161 RB1CC1Q8TDY2 1594 aa7.03□□□□□ -1.28
RTTN-206ENST00000581161 SHROOM4Q9ULL8 1493 aa7.03□□□□□ -1.28
RTTN-206ENST00000581161 MROH2BQ7Z745 1585 aa7.01□□□□□ -1.29
RTTN-206ENST00000581161 SUPT5HO00267 1087 aaKnown RBP7□□□□□ -1.29
RTTN-206ENST00000581161 PELP1Q8IZL8 1130 aaKnown RBP6.99□□□□□ -1.29
RTTN-206ENST00000581161 CECR2Q9BXF3 1484 aa6.97□□□□□ -1.29
RTTN-206ENST00000581161 SMARCA4P51532 1647 aa6.92□□□□□ -1.3
RTTN-206ENST00000581161 SMARCA2P51531 1590 aa6.92□□□□□ -1.3
RTTN-206ENST00000581161 WIZO95785 1651 aa6.9□□□□□ -1.31
RTTN-206ENST00000581161 TOP2AP11388 1531 aaKnown RBP6.88□□□□□ -1.31
RTTN-206ENST00000581161 CHIC1Q5VXU3 224 aa6.86□□□□□ -1.31
RTTN-206ENST00000581161 SCRIBQ14160 1630 aa6.84□□□□□ -1.31
RTTN-206ENST00000581161 DCAF8L2P0C7V8 631 aa6.81□□□□□ -1.32
RTTN-206ENST00000581161 PCGF6Q9BYE7 350 aa6.8□□□□□ -1.32
RTTN-206ENST00000581161 HRCP23327 699 aa6.79□□□□□ -1.32
RTTN-206ENST00000581161 BIVM-ERCC5R4GMW8 1640 aa6.78□□□□□ -1.32
RTTN-206ENST00000581161 WRNQ14191 1432 aaPredicted RBP eCLIP6.75□□□□□ -1.33
RTTN-206ENST00000581161 HMGXB3Q12766 1538 aa6.75□□□□□ -1.33
RTTN-206ENST00000581161 PPARGC1BQ86YN6 1023 aaKnown RBP6.73□□□□□ -1.33
RTTN-206ENST00000581161 PRDM2Q13029 1718 aa6.72□□□□□ -1.33
RTTN-206ENST00000581161 CCDC88BA6NC98 1476 aa6.71□□□□□ -1.34
RTTN-206ENST00000581161 SYNJ1O43426 1573 aa6.68□□□□□ -1.34
RTTN-206ENST00000581161 NCAPD3P42695 1498 aa6.68□□□□□ -1.34
RTTN-206ENST00000581161 ATAD2BQ9ULI0 1458 aa6.67□□□□□ -1.34
RTTN-206ENST00000581161 KIF21BO75037 1637 aa6.67□□□□□ -1.34
RTTN-206ENST00000581161 TOP2BQ02880 1626 aa6.66□□□□□ -1.34
RTTN-206ENST00000581161 WDR97A6NE52 1622 aa6.65□□□□□ -1.34
RTTN-206ENST00000581161 ERICH6Q7L0X2 663 aa6.64□□□□□ -1.35
RTTN-206ENST00000581161 FAM9AQ8IZU1 332 aaPredicted RBP6.63□□□□□ -1.35
RTTN-206ENST00000581161 CCER1Q8TC90 406 aaPredicted RBP6.63□□□□□ -1.35
RTTN-206ENST00000581161 PRXQ9BXM0 1461 aa6.61□□□□□ -1.35
RTTN-206ENST00000581161 LOC105371045A0A1W2PR82 267 aa6.6□□□□□ -1.35
RTTN-206ENST00000581161 CUX2O14529 1486 aa6.59□□□□□ -1.35
RTTN-206ENST00000581161 CFTRP13569 1480 aa6.58□□□□□ -1.36
RTTN-206ENST00000581161 EHMT2Q96KQ7 1210 aa6.57□□□□□ -1.36
RTTN-206ENST00000581161 ERICH3Q5RHP9 1530 aa6.55□□□□□ -1.36
RTTN-206ENST00000581161 RUSC2Q8N2Y8 1516 aa6.55□□□□□ -1.36
RTTN-206ENST00000581161 ABCC8Q09428 1581 aa6.55□□□□□ -1.36
RTTN-206ENST00000581161 TRIM26Q12899 539 aaPredicted RBP6.53□□□□□ -1.36
RTTN-206ENST00000581161 CUX1P39880 1505 aa6.52□□□□□ -1.37
RTTN-206ENST00000581161 BAZ1BQ9UIG0 1483 aaKnown RBP6.5□□□□□ -1.37
RTTN-206ENST00000581161 EEA1Q15075 1411 aa6.5□□□□□ -1.37
RTTN-206ENST00000581161 MAP3K1Q13233 1512 aa6.49□□□□□ -1.37
RTTN-206ENST00000581161 LRRIQ1Q96JM4 1722 aa6.49□□□□□ -1.37
RTTN-206ENST00000581161 KDM5BQ9UGL1 1544 aa6.48□□□□□ -1.37
RTTN-206ENST00000581161 ARHGEF11O15085 1522 aa6.47□□□□□ -1.37
RTTN-206ENST00000581161 ZEB1P37275 1124 aaPredicted RBP6.47□□□□□ -1.37
RTTN-206ENST00000581161 YTHDC1Q96MU7 727 aaKnown RBP6.47□□□□□ -1.37
RTTN-206ENST00000581161 SOGA1O94964 1423 aa6.47□□□□□ -1.37
RTTN-206ENST00000581161 ABCA5Q8WWZ7 1642 aa6.45□□□□□ -1.38
RTTN-206ENST00000581161 TNIKQ9UKE5 1360 aa6.45□□□□□ -1.38
RTTN-206ENST00000581161 TRIM41Q8WV44 630 aa6.44□□□□□ -1.38
RTTN-206ENST00000581161 SAMD9Q5K651 1589 aa6.42□□□□□ -1.38
RTTN-206ENST00000581161 TARBP1Q13395 1621 aaKnown RBP6.42□□□□□ -1.38
RTTN-206ENST00000581161 ARAP1Q96P48 1450 aa6.41□□□□□ -1.38
RTTN-206ENST00000581161 MYT1Q01538 1121 aa6.41□□□□□ -1.38
RTTN-206ENST00000581161 DENND4BO75064 1496 aaPredicted RBP6.39□□□□□ -1.39
RTTN-206ENST00000581161 TTBK1Q5TCY1 1321 aaPredicted RBP6.39□□□□□ -1.39
RTTN-206ENST00000581161 SCAF1Q9H7N4 1312 aaKnown RBP6.38□□□□□ -1.39
RTTN-206ENST00000581161 CFAP43Q8NDM7 1665 aa6.38□□□□□ -1.39
RTTN-206ENST00000581161 ABCA10Q8WWZ4 1543 aa6.36□□□□□ -1.39
RTTN-206ENST00000581161 RRBP1Q9P2E9 1410 aaKnown RBP6.35□□□□□ -1.39
RTTN-206ENST00000581161 SNAPC4Q5SXM2 1469 aa6.35□□□□□ -1.39
RTTN-206ENST00000581161 RAPGEF2Q9Y4G8 1499 aa6.35□□□□□ -1.39
RTTN-206ENST00000581161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.33□□□□□ -1.4
RTTN-206ENST00000581161 CLIP1P30622 1438 aa6.33□□□□□ -1.4
RTTN-206ENST00000581161 APLP2Q06481 763 aa6.32□□□□□ -1.4
RTTN-206ENST00000581161 CEP162Q5TB80 1403 aa6.32□□□□□ -1.4
RTTN-206ENST00000581161 ARHGAP35Q9NRY4 1499 aa6.32□□□□□ -1.4
RTTN-206ENST00000581161 DAXXQ9UER7 740 aaPredicted RBP6.32□□□□□ -1.4
RTTN-206ENST00000581161 CC2D2AQ9P2K1 1620 aa6.31□□□□□ -1.4
RTTN-206ENST00000581161 AQRO60306 1485 aaKnown RBP eCLIP6.31□□□□□ -1.45e-8■■■■■ 34.8
RTTN-206ENST00000581161 CENPBP07199 599 aaPredicted RBP6.31□□□□□ -1.4
RTTN-206ENST00000581161 CEP164Q9UPV0 1460 aa6.31□□□□□ -1.4
RTTN-206ENST00000581161 DNMBPQ6XZF7 1577 aa6.3□□□□□ -1.4
RTTN-206ENST00000581161 MAPKBP1O60336 1514 aa6.3□□□□□ -1.4
RTTN-206ENST00000581161 VPS8Q8N3P4 1428 aa6.3□□□□□ -1.4
RTTN-206ENST00000581161 GOLGA3Q08378 1498 aa6.29□□□□□ -1.4
RTTN-206ENST00000581161 ACIN1Q9UKV3 1341 aaKnown RBP6.28□□□□□ -1.4
RTTN-206ENST00000581161 LAMC3Q9Y6N6 1575 aa6.28□□□□□ -1.4
RTTN-206ENST00000581161 URB2Q14146 1524 aaKnown RBP6.28□□□□□ -1.4
RTTN-206ENST00000581161 GTF3C3Q9Y5Q9 886 aa6.27□□□□□ -1.41
RTTN-206ENST00000581161 NEUROD1Q13562 356 aa6.27□□□□□ -1.41
RTTN-206ENST00000581161 IGF1RP08069 1367 aa6.27□□□□□ -1.41
RTTN-206ENST00000581161 PABPN1Q86U42 306 aaKnown RBP eCLIP6.26□□□□□ -1.41
RTTN-206ENST00000581161 THOC2Q8NI27 1593 aaKnown RBP6.26□□□□□ -1.41
RTTN-206ENST00000581161 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms