RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 NPM1P06748 294 aaKnown RBP eCLIP4.84□□□□□ -1.63
CTC1-207ENST00000580299 SHROOM2Q13796 1616 aa4.83□□□□□ -1.64
CTC1-207ENST00000580299 GRIN2BQ13224 1484 aa4.83□□□□□ -1.64
CTC1-207ENST00000580299 POLA1P09884 1462 aaPredicted RBP4.82□□□□□ -1.64
CTC1-207ENST00000580299 PPRC1Q5VV67 1664 aaKnown RBP4.81□□□□□ -1.64
CTC1-207ENST00000580299 PPP6R1Q9UPN7 881 aa4.81□□□□□ -1.64
CTC1-207ENST00000580299 PCF11O94913 1555 aaKnown RBP4.8□□□□□ -1.64
CTC1-207ENST00000580299 TOP2AP11388 1531 aaKnown RBP4.8□□□□□ -1.64
CTC1-207ENST00000580299 TDRD9Q8NDG6 1382 aaKnown RBP4.79□□□□□ -1.64
CTC1-207ENST00000580299 CERKQ8TCT0 537 aa4.79□□□□□ -1.64
CTC1-207ENST00000580299 ADCY10Q96PN6 1610 aa4.79□□□□□ -1.64
CTC1-207ENST00000580299 KIF21BO75037 1637 aa4.78□□□□□ -1.64
CTC1-207ENST00000580299 SOGA1O94964 1423 aa4.78□□□□□ -1.64
CTC1-207ENST00000580299 RAD54L2Q9Y4B4 1467 aa4.77□□□□□ -1.65
CTC1-207ENST00000580299 ADRA2BP18089 450 aa4.77□□□□□ -1.65
CTC1-207ENST00000580299 GRIN2AQ12879 1464 aa4.76□□□□□ -1.65
CTC1-207ENST00000580299 TEX14Q8IWB6 1497 aa4.76□□□□□ -1.65
CTC1-207ENST00000580299 GLI2P10070 1586 aa4.76□□□□□ -1.65
CTC1-207ENST00000580299 MAP3K4Q9Y6R4 1608 aa4.75□□□□□ -1.65
CTC1-207ENST00000580299 FGD5Q6ZNL6 1462 aa4.75□□□□□ -1.65
CTC1-207ENST00000580299 ADAMTS12P58397 1594 aa4.74□□□□□ -1.65
CTC1-207ENST00000580299 ABCA5Q8WWZ7 1642 aa4.74□□□□□ -1.65
CTC1-207ENST00000580299 ADAMTSL3P82987 1691 aa4.73□□□□□ -1.65
CTC1-207ENST00000580299 CUL7Q14999 1698 aa4.73□□□□□ -1.65
CTC1-207ENST00000580299 NUP160Q12769 1436 aa4.73□□□□□ -1.65
CTC1-207ENST00000580299 KIAA0586Q9BVV6 1533 aa4.73□□□□□ -1.65
CTC1-207ENST00000580299 PTPRMP28827 1452 aa4.73□□□□□ -1.65
CTC1-207ENST00000580299 CFAP43Q8NDM7 1665 aa4.73□□□□□ -1.65
CTC1-207ENST00000580299 PRG4Q92954 1404 aaPredicted RBP4.72□□□□□ -1.65
CTC1-207ENST00000580299 RIMS1Q86UR5 1692 aaKnown RBP4.71□□□□□ -1.66
CTC1-207ENST00000580299 PLB1Q6P1J6 1458 aa4.71□□□□□ -1.66
CTC1-207ENST00000580299 BCORL1Q5H9F3 1711 aa4.71□□□□□ -1.66
CTC1-207ENST00000580299 MADDQ8WXG6 1647 aa4.71□□□□□ -1.66
CTC1-207ENST00000580299 MED1Q15648 1581 aaPredicted RBP4.7□□□□□ -1.66
CTC1-207ENST00000580299 RUSC2Q8N2Y8 1516 aa4.7□□□□□ -1.66
CTC1-207ENST00000580299 IQSEC2Q5JU85 1478 aa4.69□□□□□ -1.66
CTC1-207ENST00000580299 PIAS4Q8N2W9 510 aaPredicted RBP4.69□□□□□ -1.66
CTC1-207ENST00000580299 PREX1Q8TCU6 1659 aa4.69□□□□□ -1.66
CTC1-207ENST00000580299 COL17A1Q9UMD9 1497 aaPredicted RBP4.69□□□□□ -1.66
CTC1-207ENST00000580299 MSH5O43196 834 aa4.68□□□□□ -1.66
CTC1-207ENST00000580299 ASXL2Q76L83 1435 aa4.67□□□□□ -1.66
CTC1-207ENST00000580299 CCDC88BA6NC98 1476 aa4.67□□□□□ -1.66
CTC1-207ENST00000580299 FHAD1B1AJZ9 1412 aa4.66□□□□□ -1.66
CTC1-207ENST00000580299 DMRT2Q9Y5R5 561 aa4.66□□□□□ -1.66
CTC1-207ENST00000580299 ABCA10Q8WWZ4 1543 aa4.66□□□□□ -1.66
CTC1-207ENST00000580299 ABCC2Q92887 1545 aa4.66□□□□□ -1.66
CTC1-207ENST00000580299 FER1L4A9Z1Z3 1794 aa4.65□□□□□ -1.66
CTC1-207ENST00000580299 JPH4Q96JJ6 628 aa4.65□□□□□ -1.67
CTC1-207ENST00000580299 CUX1P39880 1505 aa4.65□□□□□ -1.67
CTC1-207ENST00000580299 STRCQ7RTU9 1775 aa4.65□□□□□ -1.67
CTC1-207ENST00000580299 EPRSP07814 1512 aaKnown RBP4.64□□□□□ -1.67
CTC1-207ENST00000580299 HSPA2P54652 639 aa4.64□□□□□ -1.67
CTC1-207ENST00000580299 ERICH3Q5RHP9 1530 aa4.63□□□□□ -1.67
CTC1-207ENST00000580299 ZCCHC11Q5TAX3 1644 aaKnown RBP4.63□□□□□ -1.67
CTC1-207ENST00000580299 ARID4BQ4LE39 1312 aaPredicted RBP4.61□□□□□ -1.67
CTC1-207ENST00000580299 YEATS2Q9ULM3 1422 aa4.61□□□□□ -1.67
CTC1-207ENST00000580299 MAGI3Q5TCQ9 1506 aa4.61□□□□□ -1.67
CTC1-207ENST00000580299 TTC37Q6PGP7 1564 aa4.6□□□□□ -1.67
CTC1-207ENST00000580299 LTBP4Q8N2S1 1624 aa4.6□□□□□ -1.67
CTC1-207ENST00000580299 SETD1BQ9UPS6 1966 aaKnown RBP4.6□□□□□ -1.67
CTC1-207ENST00000580299 UHRF1BP1LA0JNW5 1464 aa4.59□□□□□ -1.67
CTC1-207ENST00000580299 PTPRGP23470 1445 aa4.59□□□□□ -1.67
CTC1-207ENST00000580299 POGZQ7Z3K3 1410 aa4.59□□□□□ -1.67
CTC1-207ENST00000580299 ARAP3Q8WWN8 1544 aa4.59□□□□□ -1.67
CTC1-207ENST00000580299 ARHGEF40Q8TER5 1519 aa4.58□□□□□ -1.68
CTC1-207ENST00000580299 WDR7Q9Y4E6 1490 aa4.58□□□□□ -1.68
CTC1-207ENST00000580299 PTPRTO14522 1441 aa4.58□□□□□ -1.68
CTC1-207ENST00000580299 CARMIL2Q6F5E8 1435 aa4.58□□□□□ -1.68
CTC1-207ENST00000580299 CD109Q6YHK3 1445 aa4.58□□□□□ -1.68
CTC1-207ENST00000580299 UBAP1LF5GYI3 381 aa4.58□□□□□ -1.68
CTC1-207ENST00000580299 FANCAO15360 1455 aa4.57□□□□□ -1.68
CTC1-207ENST00000580299 SUPT6HQ7KZ85 1726 aaKnown RBP4.57□□□□□ -1.68
CTC1-207ENST00000580299 KDM5BQ9UGL1 1544 aa4.56□□□□□ -1.68
CTC1-207ENST00000580299 TTBK1Q5TCY1 1321 aaPredicted RBP4.56□□□□□ -1.68
CTC1-207ENST00000580299 SETD1AO15047 1707 aaKnown RBP4.56□□□□□ -1.68
CTC1-207ENST00000580299 KIAA0556O60303 1618 aa4.56□□□□□ -1.68
CTC1-207ENST00000580299 WRNQ14191 1432 aaPredicted RBP eCLIP4.55□□□□□ -1.68
CTC1-207ENST00000580299 UHRF1BP1Q6BDS2 1440 aa4.55□□□□□ -1.68
CTC1-207ENST00000580299 UACAQ9BZF9 1416 aa4.55□□□□□ -1.68
CTC1-207ENST00000580299 TNIKQ9UKE5 1360 aa4.55□□□□□ -1.68
CTC1-207ENST00000580299 SCAF1Q9H7N4 1312 aaKnown RBP4.55□□□□□ -1.68
CTC1-207ENST00000580299 PHLDB1Q86UU1 1377 aa4.54□□□□□ -1.68
CTC1-207ENST00000580299 BIVM-ERCC5R4GMW8 1640 aa4.54□□□□□ -1.68
CTC1-207ENST00000580299 RICTORQ6R327 1708 aa4.53□□□□□ -1.68
CTC1-207ENST00000580299 FRMPD1Q5SYB0 1578 aa4.53□□□□□ -1.69
CTC1-207ENST00000580299 CFAP74Q9C0B2 1584 aa4.53□□□□□ -1.69
CTC1-207ENST00000580299 EFCAB5A4FU69 1503 aa4.52□□□□□ -1.69
CTC1-207ENST00000580299 HSPA1LP34931 641 aa4.52□□□□□ -1.69
CTC1-207ENST00000580299 IQGAP2Q13576 1575 aa4.52□□□□□ -1.69
CTC1-207ENST00000580299 AKNAQ7Z591 1439 aa4.51□□□□□ -1.69
CTC1-207ENST00000580299 ABCA9Q8IUA7 1624 aa4.5□□□□□ -1.69
CTC1-207ENST00000580299 NEO1Q92859 1461 aa4.5□□□□□ -1.69
CTC1-207ENST00000580299 PIP4K2BP78356 416 aa4.5□□□□□ -1.69
CTC1-207ENST00000580299 C3P01024 1663 aa4.5□□□□□ -1.69
CTC1-207ENST00000580299 ZFYVE16Q7Z3T8 1539 aa4.5□□□□□ -1.69
CTC1-207ENST00000580299 TOM1O60784 492 aa4.49□□□□□ -1.69
CTC1-207ENST00000580299 SIGLEC1Q9BZZ2 1709 aa4.49□□□□□ -1.69
CTC1-207ENST00000580299 NCOA1Q15788 1441 aa4.48□□□□□ -1.69
CTC1-207ENST00000580299 ZMYM4Q5VZL5 1548 aa4.48□□□□□ -1.69
CTC1-207ENST00000580299 ARHGEF12Q9NZN5 1544 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms