RNA–Protein interactions for RNA: ENST00000580299.1

CTC1-207, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 5

Gene CTC1, Length 375 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-207ENST00000580299 NISCHQ9Y2I1 1504 aa6.4□□□□□ -1.38
CTC1-207ENST00000580299 ABCC9O60706 1549 aa6.38□□□□□ -1.39
CTC1-207ENST00000580299 AEBP2Q6ZN18 517 aaPredicted RBP6.37□□□□□ -1.39
CTC1-207ENST00000580299 DNAJC5BQ9UF47 199 aa6.24□□□□□ -1.41
CTC1-207ENST00000580299 CHIC1Q5VXU3 224 aa6.19□□□□□ -1.42
CTC1-207ENST00000580299 DNAJC5Q9H3Z4 198 aa6.14□□□□□ -1.43
CTC1-207ENST00000580299 CCDC180Q9P1Z9 1646 aa6.09□□□□□ -1.43
CTC1-207ENST00000580299 RB1CC1Q8TDY2 1594 aa5.97□□□□□ -1.45
CTC1-207ENST00000580299 UNC13AQ9UPW8 1703 aa5.88□□□□□ -1.47
CTC1-207ENST00000580299 CECR2Q9BXF3 1484 aa5.8□□□□□ -1.48
CTC1-207ENST00000580299 CC2D2AQ9P2K1 1620 aa5.79□□□□□ -1.48
CTC1-207ENST00000580299 NACADO15069 1562 aa5.79□□□□□ -1.48
CTC1-207ENST00000580299 PABPN1Q86U42 306 aaKnown RBP eCLIP5.78□□□□□ -1.48
CTC1-207ENST00000580299 CUX2O14529 1486 aa5.74□□□□□ -1.49
CTC1-207ENST00000580299 TRIM41Q8WV44 630 aa5.73□□□□□ -1.49
CTC1-207ENST00000580299 BICRAQ9NZM4 1560 aa5.72□□□□□ -1.49
CTC1-207ENST00000580299 SHROOM4Q9ULL8 1493 aa5.69□□□□□ -1.5
CTC1-207ENST00000580299 EIF4G1Q04637 1599 aaKnown RBP5.66□□□□□ -1.5
CTC1-207ENST00000580299 ERCC6Q03468 1493 aa5.6□□□□□ -1.51
CTC1-207ENST00000580299 DCAF8L2P0C7V8 631 aa5.55□□□□□ -1.52
CTC1-207ENST00000580299 MYO15BQ96JP2 1530 aa5.53□□□□□ -1.52
CTC1-207ENST00000580299 THOC2Q8NI27 1593 aaKnown RBP5.45□□□□□ -1.54
CTC1-207ENST00000580299 PHF23Q9BUL5 403 aaPredicted RBP5.44□□□□□ -1.54
CTC1-207ENST00000580299 BAZ1AQ9NRL2 1556 aaPredicted RBP5.44□□□□□ -1.54
CTC1-207ENST00000580299 SCRIBQ14160 1630 aa5.44□□□□□ -1.54
CTC1-207ENST00000580299 SENP3Q9H4L4 574 aaPredicted RBP5.43□□□□□ -1.54
CTC1-207ENST00000580299 RIMBP3CA6NJZ7 1639 aa5.4□□□□□ -1.55
CTC1-207ENST00000580299 RIMBP3BA6NNM3 1639 aa5.4□□□□□ -1.55
CTC1-207ENST00000580299 RIMBP3Q9UFD9 1639 aa5.4□□□□□ -1.55
CTC1-207ENST00000580299 SMARCA2P51531 1590 aa5.38□□□□□ -1.55
CTC1-207ENST00000580299 KIF21AQ7Z4S6 1674 aa5.37□□□□□ -1.55
CTC1-207ENST00000580299 TRHP20396 242 aaPredicted RBP5.36□□□□□ -1.55
CTC1-207ENST00000580299 ILDR1Q86SU0 546 aaPredicted RBP5.35□□□□□ -1.55
CTC1-207ENST00000580299 OSCARQ8IYS5 282 aa5.33□□□□□ -1.56
CTC1-207ENST00000580299 LAMC3Q9Y6N6 1575 aa5.33□□□□□ -1.56
CTC1-207ENST00000580299 NESP48681 1621 aa5.32□□□□□ -1.56
CTC1-207ENST00000580299 ARHGEF11O15085 1522 aa5.29□□□□□ -1.56
CTC1-207ENST00000580299 DCAF1Q9Y4B6 1507 aa5.29□□□□□ -1.56
CTC1-207ENST00000580299 NCAPD3P42695 1498 aa5.27□□□□□ -1.57
CTC1-207ENST00000580299 HMGXB3Q12766 1538 aa5.27□□□□□ -1.57
CTC1-207ENST00000580299 PDS5BQ9NTI5 1447 aa5.26□□□□□ -1.57
CTC1-207ENST00000580299 WDR62O43379 1518 aa5.25□□□□□ -1.57
CTC1-207ENST00000580299 MRC2Q9UBG0 1479 aa5.25□□□□□ -1.57
CTC1-207ENST00000580299 ZCCHC6Q5VYS8 1495 aaKnown RBP5.21□□□□□ -1.58
CTC1-207ENST00000580299 CYB5RLQ6IPT4 315 aa5.21□□□□□ -1.58
CTC1-207ENST00000580299 ARAP1Q96P48 1450 aa5.19□□□□□ -1.58
CTC1-207ENST00000580299 ATAD2BQ9ULI0 1458 aa5.19□□□□□ -1.58
CTC1-207ENST00000580299 BAZ1BQ9UIG0 1483 aaKnown RBP5.18□□□□□ -1.58
CTC1-207ENST00000580299 ERCC6L2Q5T890 1561 aa5.17□□□□□ -1.58
CTC1-207ENST00000580299 CHD1O14646 1710 aa5.17□□□□□ -1.58
CTC1-207ENST00000580299 CEP164Q9UPV0 1460 aa5.15□□□□□ -1.58
CTC1-207ENST00000580299 SMARCA4P51532 1647 aa5.15□□□□□ -1.59
CTC1-207ENST00000580299 RSF1Q96T23 1441 aaPredicted RBP5.14□□□□□ -1.59
CTC1-207ENST00000580299 LMTK3Q96Q04 1460 aa5.13□□□□□ -1.59
CTC1-207ENST00000580299 FBXO41Q8TF61 875 aa5.09□□□□□ -1.59
CTC1-207ENST00000580299 PEG3Q9GZU2 1588 aa5.08□□□□□ -1.6
CTC1-207ENST00000580299 SOCS7O14512 581 aa5.08□□□□□ -1.6
CTC1-207ENST00000580299 KIF13AQ9H1H9 1805 aa5.08□□□□□ -1.6
CTC1-207ENST00000580299 PRDM2Q13029 1718 aa5.08□□□□□ -1.6
CTC1-207ENST00000580299 EIF4G3O43432 1585 aaKnown RBP5.08□□□□□ -1.6
CTC1-207ENST00000580299 CADPSQ9ULU8 1353 aa5.07□□□□□ -1.6
CTC1-207ENST00000580299 HECW2Q9P2P5 1572 aa5.07□□□□□ -1.6
CTC1-207ENST00000580299 FANCD2Q9BXW9 1451 aa5.07□□□□□ -1.6
CTC1-207ENST00000580299 POTEDQ86YR6 584 aa5.05□□□□□ -1.6
CTC1-207ENST00000580299 IFT140Q96RY7 1462 aa5.04□□□□□ -1.6
CTC1-207ENST00000580299 FOXD1Q16676 465 aa5.03□□□□□ -1.6
CTC1-207ENST00000580299 KDM6BO15054 1643 aa5.03□□□□□ -1.6
CTC1-207ENST00000580299 SYNJ1O43426 1573 aa5.03□□□□□ -1.6
CTC1-207ENST00000580299 URB2Q14146 1524 aaKnown RBP5.02□□□□□ -1.61
CTC1-207ENST00000580299 ZNF608Q9ULD9 1512 aaPredicted RBP5.02□□□□□ -1.61
CTC1-207ENST00000580299 KDM4FA0A1W2PPD8 638 aa5.01□□□□□ -1.61
CTC1-207ENST00000580299 PLPPR3Q6T4P5 718 aa5.01□□□□□ -1.61
CTC1-207ENST00000580299 CLASP1Q7Z460 1538 aa5.01□□□□□ -1.61
CTC1-207ENST00000580299 FBLN2P98095 1184 aa4.99□□□□□ -1.61
CTC1-207ENST00000580299 DISP3Q9P2K9 1392 aa4.99□□□□□ -1.61
CTC1-207ENST00000580299 GAPVD1Q14C86 1478 aa4.98□□□□□ -1.61
CTC1-207ENST00000580299 SPATA31D1Q6ZQQ2 1576 aa4.98□□□□□ -1.61
CTC1-207ENST00000580299 TSPOAP1O95153 1857 aa4.98□□□□□ -1.61
CTC1-207ENST00000580299 ADGRL1O94910 1474 aa4.97□□□□□ -1.61
CTC1-207ENST00000580299 SYNJ2O15056 1496 aa4.95□□□□□ -1.62
CTC1-207ENST00000580299 ILDR2Q71H61 639 aa4.94□□□□□ -1.62
CTC1-207ENST00000580299 CFTRP13569 1480 aa4.94□□□□□ -1.62
CTC1-207ENST00000580299 WDR97A6NE52 1622 aa4.94□□□□□ -1.62
CTC1-207ENST00000580299 TARBP1Q13395 1621 aaKnown RBP4.94□□□□□ -1.62
CTC1-207ENST00000580299 ABCC8Q09428 1581 aa4.93□□□□□ -1.62
CTC1-207ENST00000580299 TOP2BQ02880 1626 aa4.92□□□□□ -1.62
CTC1-207ENST00000580299 TOPBP1Q92547 1522 aa4.92□□□□□ -1.62
CTC1-207ENST00000580299 DIP2BQ9P265 1576 aa4.91□□□□□ -1.62
CTC1-207ENST00000580299 DNMBPQ6XZF7 1577 aa4.91□□□□□ -1.62
CTC1-207ENST00000580299 MROH2BQ7Z745 1585 aa4.91□□□□□ -1.62
CTC1-207ENST00000580299 AQRO60306 1485 aaKnown RBP eCLIP4.9□□□□□ -1.62
CTC1-207ENST00000580299 SNAPC4Q5SXM2 1469 aa4.9□□□□□ -1.62
CTC1-207ENST00000580299 MAGI1Q96QZ7 1491 aaPredicted RBP4.9□□□□□ -1.62
CTC1-207ENST00000580299 PBRM1Q86U86 1689 aa4.89□□□□□ -1.63
CTC1-207ENST00000580299 CHMP7Q8WUX9 453 aaPredicted RBP4.89□□□□□ -1.63
CTC1-207ENST00000580299 ABCC10Q5T3U5 1492 aa4.88□□□□□ -1.63
CTC1-207ENST00000580299 MAPKBP1O60336 1514 aa4.87□□□□□ -1.63
CTC1-207ENST00000580299 WIZO95785 1651 aa4.87□□□□□ -1.63
CTC1-207ENST00000580299 FAM69CQ0P6D2 419 aa4.87□□□□□ -1.63
CTC1-207ENST00000580299 CEP170Q5SW79 1584 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms