RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 CUL7Q14999 1698 aa27.41■■□□□ 1.98
CRLF3-203ENST00000578692 RUSC2Q8N2Y8 1516 aa27.38■■□□□ 1.97
CRLF3-203ENST00000578692 CARMIL1Q5VZK9 1371 aa27.35■■□□□ 1.97
CRLF3-203ENST00000578692 KIAA0586Q9BVV6 1533 aa27.34■■□□□ 1.97
CRLF3-203ENST00000578692 NPM1P06748 294 aaKnown RBP eCLIP27.16■■□□□ 1.94
CRLF3-203ENST00000578692 RAPGEF2Q9Y4G8 1499 aa27.11■■□□□ 1.93
CRLF3-203ENST00000578692 CARMIL2Q6F5E8 1435 aa27.07■■□□□ 1.92
CRLF3-203ENST00000578692 IQGAP2Q13576 1575 aa27.07■■□□□ 1.92
CRLF3-203ENST00000578692 PTPRGP23470 1445 aa27.06■■□□□ 1.92
CRLF3-203ENST00000578692 ADCY10Q96PN6 1610 aa27.05■■□□□ 1.92
CRLF3-203ENST00000578692 TTBK1Q5TCY1 1321 aaPredicted RBP27.04■■□□□ 1.92
CRLF3-203ENST00000578692 TNIKQ9UKE5 1360 aa27.02■■□□□ 1.92
CRLF3-203ENST00000578692 KIF13AQ9H1H9 1805 aa27.01■■□□□ 1.91
CRLF3-203ENST00000578692 MAPKBP1O60336 1514 aa26.99■■□□□ 1.91
CRLF3-203ENST00000578692 FAM69CQ0P6D2 419 aa26.98■■□□□ 1.91
CRLF3-203ENST00000578692 ABCC10Q5T3U5 1492 aa26.96■■□□□ 1.91
CRLF3-203ENST00000578692 DISP1Q96F81 1524 aa26.94■■□□□ 1.9
CRLF3-203ENST00000578692 UGGT2Q9NYU1 1516 aa26.92■■□□□ 1.9
CRLF3-203ENST00000578692 PRXQ9BXM0 1461 aa26.87■■□□□ 1.89
CRLF3-203ENST00000578692 DIP2BQ9P265 1576 aa26.87■■□□□ 1.89
CRLF3-203ENST00000578692 UACAQ9BZF9 1416 aa26.85■■□□□ 1.89
CRLF3-203ENST00000578692 ABCC2Q92887 1545 aa26.85■■□□□ 1.89
CRLF3-203ENST00000578692 CTTNBP2Q8WZ74 1663 aa26.83■■□□□ 1.89
CRLF3-203ENST00000578692 UHRF1BP1LA0JNW5 1464 aa26.83■■□□□ 1.89
CRLF3-203ENST00000578692 KIAA0556O60303 1618 aa26.82■■□□□ 1.88
CRLF3-203ENST00000578692 CSRNP3Q8WYN3 585 aa26.79■■□□□ 1.88
CRLF3-203ENST00000578692 ASXL2Q76L83 1435 aa26.75■■□□□ 1.87
CRLF3-203ENST00000578692 GOLGA3Q08378 1498 aa26.74■■□□□ 1.87
CRLF3-203ENST00000578692 PLB1Q6P1J6 1458 aa26.74■■□□□ 1.87
CRLF3-203ENST00000578692 KDM5BQ9UGL1 1544 aa26.71■■□□□ 1.87
CRLF3-203ENST00000578692 TSPOAP1O95153 1857 aa26.7■■□□□ 1.86
CRLF3-203ENST00000578692 AEBP2Q6ZN18 517 aaPredicted RBP26.67■■□□□ 1.86
CRLF3-203ENST00000578692 EEA1Q15075 1411 aa26.66■■□□□ 1.86
CRLF3-203ENST00000578692 ZCCHC11Q5TAX3 1644 aaKnown RBP26.64■■□□□ 1.85
CRLF3-203ENST00000578692 GLI2P10070 1586 aa26.63■■□□□ 1.85
CRLF3-203ENST00000578692 KDM6BO15054 1643 aa26.6■■□□□ 1.85
CRLF3-203ENST00000578692 FAM9AQ8IZU1 332 aaPredicted RBP26.59■■□□□ 1.85
CRLF3-203ENST00000578692 P3H3Q8IVL6 736 aa26.58■■□□□ 1.85
CRLF3-203ENST00000578692 EPRSP07814 1512 aaKnown RBP26.58■■□□□ 1.84
CRLF3-203ENST00000578692 ABCA8O94911 1581 aa26.57■■□□□ 1.84
CRLF3-203ENST00000578692 PPRC1Q5VV67 1664 aaKnown RBP26.51■■□□□ 1.83
CRLF3-203ENST00000578692 WDR7Q9Y4E6 1490 aa26.51■■□□□ 1.83
CRLF3-203ENST00000578692 CHIC1Q5VXU3 224 aa26.48■■□□□ 1.83
CRLF3-203ENST00000578692 MAP3K4Q9Y6R4 1608 aa26.48■■□□□ 1.83
CRLF3-203ENST00000578692 KCNH8Q96L42 1107 aa26.46■■□□□ 1.83
CRLF3-203ENST00000578692 SAMD9Q5K651 1589 aa26.46■■□□□ 1.83
CRLF3-203ENST00000578692 RANGAP1P46060 587 aaPredicted RBP26.46■■□□□ 1.83
CRLF3-203ENST00000578692 TEX14Q8IWB6 1497 aa26.42■■□□□ 1.82
CRLF3-203ENST00000578692 ARID3CA6NKF2 412 aa26.42■■□□□ 1.82
CRLF3-203ENST00000578692 KIF21BO75037 1637 aa26.4■■□□□ 1.82
CRLF3-203ENST00000578692 ATP10BO94823 1461 aa26.39■■□□□ 1.81
CRLF3-203ENST00000578692 CD109Q6YHK3 1445 aa26.36■■□□□ 1.81
CRLF3-203ENST00000578692 COL17A1Q9UMD9 1497 aaPredicted RBP26.35■■□□□ 1.81
CRLF3-203ENST00000578692 RAPGEF6Q8TEU7 1601 aa26.33■■□□□ 1.81
CRLF3-203ENST00000578692 CFAP43Q8NDM7 1665 aa26.33■■□□□ 1.81
CRLF3-203ENST00000578692 FHOD3Q2V2M9 1422 aa26.32■■□□□ 1.8
CRLF3-203ENST00000578692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.31■■□□□ 1.8
CRLF3-203ENST00000578692 HNRNPUL2Q1KMD3 747 aaKnown RBP26.31■■□□□ 1.8
CRLF3-203ENST00000578692 EHMT2Q96KQ7 1210 aa26.31■■□□□ 1.8
CRLF3-203ENST00000578692 MAGI3Q5TCQ9 1506 aa26.3■■□□□ 1.8
CRLF3-203ENST00000578692 UBTFP17480 764 aaKnown RBP26.3■■□□□ 1.8
CRLF3-203ENST00000578692 KDM4FA0A1W2PPD8 638 aa26.28■■□□□ 1.8
CRLF3-203ENST00000578692 EFCAB5A4FU69 1503 aa26.24■■□□□ 1.79
CRLF3-203ENST00000578692 NUP153P49790 1475 aaKnown RBP26.23■■□□□ 1.79
CRLF3-203ENST00000578692 PLEKHD1A6NEE1 506 aa26.17■■□□□ 1.78
CRLF3-203ENST00000578692 ABCA9Q8IUA7 1624 aa26.16■■□□□ 1.78
CRLF3-203ENST00000578692 PHLDB1Q86UU1 1377 aa26.1■■□□□ 1.77
CRLF3-203ENST00000578692 ARAP3Q8WWN8 1544 aa26.1■■□□□ 1.77
CRLF3-203ENST00000578692 ADGRL1O94910 1474 aa26.07■■□□□ 1.76
CRLF3-203ENST00000578692 ARHGAP35Q9NRY4 1499 aa26.07■■□□□ 1.76
CRLF3-203ENST00000578692 ATP1B4Q9UN42 357 aaPredicted RBP26.06■■□□□ 1.76
CRLF3-203ENST00000578692 FMN1Q68DA7 1419 aa26.05■■□□□ 1.76
CRLF3-203ENST00000578692 NEO1Q92859 1461 aa26.03■■□□□ 1.76
CRLF3-203ENST00000578692 CDK13Q14004 1512 aaKnown RBP25.99■■□□□ 1.75
CRLF3-203ENST00000578692 RAPGEF3O95398 923 aa25.99■■□□□ 1.75
CRLF3-203ENST00000578692 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.96■■□□□ 1.75
CRLF3-203ENST00000578692 HECW1Q76N89 1606 aa25.94■■□□□ 1.74
CRLF3-203ENST00000578692 CDK11AQ9UQ88 783 aaPredicted RBP25.94■■□□□ 1.74
CRLF3-203ENST00000578692 AKNAQ7Z591 1439 aa25.9■■□□□ 1.74
CRLF3-203ENST00000578692 FANCAO15360 1455 aa25.9■■□□□ 1.74
CRLF3-203ENST00000578692 TTC37Q6PGP7 1564 aa25.89■■□□□ 1.74
CRLF3-203ENST00000578692 DENND4BO75064 1496 aaPredicted RBP25.86■■□□□ 1.73
CRLF3-203ENST00000578692 CFAP74Q9C0B2 1584 aa25.85■■□□□ 1.73
CRLF3-203ENST00000578692 FRMPD1Q5SYB0 1578 aa25.84■■□□□ 1.73
CRLF3-203ENST00000578692 PLCH2O75038 1416 aa25.84■■□□□ 1.73
CRLF3-203ENST00000578692 TROQ12816 1431 aaPredicted RBP25.79■■□□□ 1.72
CRLF3-203ENST00000578692 RICTORQ6R327 1708 aa25.79■■□□□ 1.72
CRLF3-203ENST00000578692 LRRIQ1Q96JM4 1722 aa25.79■■□□□ 1.72
CRLF3-203ENST00000578692 CASKIN1Q8WXD9 1431 aa25.78■■□□□ 1.72
CRLF3-203ENST00000578692 EFCAB2Q5VUJ9 269 aa25.77■■□□□ 1.72
CRLF3-203ENST00000578692 CLIP1P30622 1438 aa25.76■■□□□ 1.71
CRLF3-203ENST00000578692 ARID4BQ4LE39 1312 aaPredicted RBP25.76■■□□□ 1.71
CRLF3-203ENST00000578692 SCAPERQ9BY12 1400 aa25.74■■□□□ 1.71
CRLF3-203ENST00000578692 KIF14Q15058 1648 aa25.74■■□□□ 1.71
CRLF3-203ENST00000578692 MYO5CQ9NQX4 1742 aa25.74■■□□□ 1.71
CRLF3-203ENST00000578692 PCF11O94913 1555 aaKnown RBP25.73■■□□□ 1.71
CRLF3-203ENST00000578692 CCDC18Q5T9S5 1454 aa25.72■■□□□ 1.71
CRLF3-203ENST00000578692 ADAMTSL3P82987 1691 aa25.69■■□□□ 1.7
CRLF3-203ENST00000578692 ARHGEF40Q8TER5 1519 aa25.69■■□□□ 1.7
CRLF3-203ENST00000578692 ZMYM4Q5VZL5 1548 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms