RNA–Protein interactions for RNA: ENST00000576462.1

SLC12A4-217, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 673 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-217ENST00000576462 KIF13AQ9H1H9 1805 aa34.89■■■■□ 3.18
SLC12A4-217ENST00000576462 IGF1RP08069 1367 aa34.88■■■■□ 3.17
SLC12A4-217ENST00000576462 KIF27Q86VH2 1401 aa34.88■■■■□ 3.17
SLC12A4-217ENST00000576462 NPM1P06748 294 aaKnown RBP eCLIP34.86■■■■□ 3.17
SLC12A4-217ENST00000576462 KIAA0586Q9BVV6 1533 aa34.81■■■■□ 3.16
SLC12A4-217ENST00000576462 FAM69CQ0P6D2 419 aa34.8■■■■□ 3.16
SLC12A4-217ENST00000576462 CUL7Q14999 1698 aa34.79■■■■□ 3.16
SLC12A4-217ENST00000576462 ADCY10Q96PN6 1610 aa34.76■■■■□ 3.15
SLC12A4-217ENST00000576462 ABCC10Q5T3U5 1492 aa34.74■■■■□ 3.15
SLC12A4-217ENST00000576462 MAPKBP1O60336 1514 aa34.71■■■■□ 3.15
SLC12A4-217ENST00000576462 CARMIL1Q5VZK9 1371 aa34.67■■■■□ 3.14
SLC12A4-217ENST00000576462 TTBK1Q5TCY1 1321 aaPredicted RBP34.66■■■■□ 3.14
SLC12A4-217ENST00000576462 DIP2BQ9P265 1576 aa34.65■■■■□ 3.14
SLC12A4-217ENST00000576462 PTPRGP23470 1445 aa34.58■■■■□ 3.13
SLC12A4-217ENST00000576462 CARMIL2Q6F5E8 1435 aa34.5■■■■□ 3.11
SLC12A4-217ENST00000576462 TNIKQ9UKE5 1360 aa34.49■■■■□ 3.11
SLC12A4-217ENST00000576462 IQGAP2Q13576 1575 aa34.46■■■■□ 3.11
SLC12A4-217ENST00000576462 TSPOAP1O95153 1857 aa34.46■■■■□ 3.11
SLC12A4-217ENST00000576462 KDM6BO15054 1643 aa34.43■■■■□ 3.1
SLC12A4-217ENST00000576462 ABCC2Q92887 1545 aa34.39■■■■□ 3.1
SLC12A4-217ENST00000576462 ASXL2Q76L83 1435 aa34.32■■■■□ 3.08
SLC12A4-217ENST00000576462 DISP1Q96F81 1524 aa34.32■■■■□ 3.08
SLC12A4-217ENST00000576462 RAPGEF2Q9Y4G8 1499 aa34.31■■■■□ 3.08
SLC12A4-217ENST00000576462 UACAQ9BZF9 1416 aa34.3■■■■□ 3.08
SLC12A4-217ENST00000576462 UHRF1BP1LA0JNW5 1464 aa34.27■■■■□ 3.08
SLC12A4-217ENST00000576462 PLB1Q6P1J6 1458 aa34.27■■■■□ 3.08
SLC12A4-217ENST00000576462 UGGT2Q9NYU1 1516 aa34.21■■■■□ 3.07
SLC12A4-217ENST00000576462 KDM4FA0A1W2PPD8 638 aa34.21■■■■□ 3.07
SLC12A4-217ENST00000576462 GLI2P10070 1586 aa34.19■■■■□ 3.06
SLC12A4-217ENST00000576462 KIAA0556O60303 1618 aa34.15■■■■□ 3.06
SLC12A4-217ENST00000576462 PPRC1Q5VV67 1664 aaKnown RBP34.14■■■■□ 3.06
SLC12A4-217ENST00000576462 KDM5BQ9UGL1 1544 aa34.13■■■■□ 3.05
SLC12A4-217ENST00000576462 EPRSP07814 1512 aaKnown RBP34.09■■■■□ 3.05
SLC12A4-217ENST00000576462 ZCCHC11Q5TAX3 1644 aaKnown RBP34.09■■■■□ 3.05
SLC12A4-217ENST00000576462 MAP3K4Q9Y6R4 1608 aa34.01■■■■□ 3.03
SLC12A4-217ENST00000576462 CTTNBP2Q8WZ74 1663 aa34■■■■□ 3.03
SLC12A4-217ENST00000576462 COL17A1Q9UMD9 1497 aaPredicted RBP33.98■■■■□ 3.03
SLC12A4-217ENST00000576462 TEX14Q8IWB6 1497 aa33.95■■■■□ 3.02
SLC12A4-217ENST00000576462 GOLGA3Q08378 1498 aa33.94■■■■□ 3.02
SLC12A4-217ENST00000576462 WDR7Q9Y4E6 1490 aa33.94■■■■□ 3.02
SLC12A4-217ENST00000576462 ADGRL1O94910 1474 aa33.88■■■■□ 3.01
SLC12A4-217ENST00000576462 PRXQ9BXM0 1461 aa33.88■■■■□ 3.01
SLC12A4-217ENST00000576462 KCNH8Q96L42 1107 aa33.86■■■■□ 3.01
SLC12A4-217ENST00000576462 ABCA8O94911 1581 aa33.85■■■■□ 3.01
SLC12A4-217ENST00000576462 CD109Q6YHK3 1445 aa33.78■■■■□ 3
SLC12A4-217ENST00000576462 P3H3Q8IVL6 736 aa33.77■■■■□ 3
SLC12A4-217ENST00000576462 ARID3CA6NKF2 412 aa33.76■■■□□ 2.99
SLC12A4-217ENST00000576462 MAGI3Q5TCQ9 1506 aa33.71■■■□□ 2.99
SLC12A4-217ENST00000576462 CFAP43Q8NDM7 1665 aa33.71■■■□□ 2.99
SLC12A4-217ENST00000576462 FAM9AQ8IZU1 332 aaPredicted RBP33.69■■■□□ 2.98
SLC12A4-217ENST00000576462 CSRNP3Q8WYN3 585 aa33.62■■■□□ 2.97
SLC12A4-217ENST00000576462 ATP10BO94823 1461 aa33.6■■■□□ 2.97
SLC12A4-217ENST00000576462 RANGAP1P46060 587 aaPredicted RBP33.53■■■□□ 2.96
SLC12A4-217ENST00000576462 SAMD9Q5K651 1589 aa33.51■■■□□ 2.95
SLC12A4-217ENST00000576462 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.49■■■□□ 2.95
SLC12A4-217ENST00000576462 HNRNPUL2Q1KMD3 747 aaKnown RBP33.49■■■□□ 2.95
SLC12A4-217ENST00000576462 HECW2Q9P2P5 1572 aa33.47■■■□□ 2.95
SLC12A4-217ENST00000576462 RAPGEF6Q8TEU7 1601 aa33.46■■■□□ 2.95
SLC12A4-217ENST00000576462 KIF21BO75037 1637 aa33.45■■■□□ 2.95
SLC12A4-217ENST00000576462 ARAP3Q8WWN8 1544 aa33.44■■■□□ 2.94
SLC12A4-217ENST00000576462 ABCA9Q8IUA7 1624 aa33.42■■■□□ 2.94
SLC12A4-217ENST00000576462 ILDR1Q86SU0 546 aaPredicted RBP33.41■■■□□ 2.94
SLC12A4-217ENST00000576462 EEA1Q15075 1411 aa33.36■■■□□ 2.93
SLC12A4-217ENST00000576462 FHOD3Q2V2M9 1422 aa33.36■■■□□ 2.93
SLC12A4-217ENST00000576462 RAPGEF3O95398 923 aa33.35■■■□□ 2.93
SLC12A4-217ENST00000576462 PHLDB1Q86UU1 1377 aa33.34■■■□□ 2.93
SLC12A4-217ENST00000576462 NUP153P49790 1475 aaKnown RBP33.34■■■□□ 2.93
SLC12A4-217ENST00000576462 NEO1Q92859 1461 aa33.28■■■□□ 2.92
SLC12A4-217ENST00000576462 PLEKHD1A6NEE1 506 aa33.23■■■□□ 2.91
SLC12A4-217ENST00000576462 FRMPD1Q5SYB0 1578 aa33.17■■■□□ 2.9
SLC12A4-217ENST00000576462 ARID4BQ4LE39 1312 aaPredicted RBP33.17■■■□□ 2.9
SLC12A4-217ENST00000576462 EHMT2Q96KQ7 1210 aa33.15■■■□□ 2.9
SLC12A4-217ENST00000576462 ADAMTSL3P82987 1691 aa33.13■■■□□ 2.89
SLC12A4-217ENST00000576462 EFCAB5A4FU69 1503 aa33.13■■■□□ 2.89
SLC12A4-217ENST00000576462 PTPRMP28827 1452 aa33.13■■■□□ 2.89
SLC12A4-217ENST00000576462 DENND4BO75064 1496 aaPredicted RBP33.09■■■□□ 2.89
SLC12A4-217ENST00000576462 AKNAQ7Z591 1439 aa33.09■■■□□ 2.89
SLC12A4-217ENST00000576462 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.08■■■□□ 2.892e-8■■□□□ 14.3
SLC12A4-217ENST00000576462 FANCAO15360 1455 aa33.07■■■□□ 2.88
SLC12A4-217ENST00000576462 BCORL1Q5H9F3 1711 aa33.05■■■□□ 2.88
SLC12A4-217ENST00000576462 TTC37Q6PGP7 1564 aa33.04■■■□□ 2.88
SLC12A4-217ENST00000576462 CDK13Q14004 1512 aaKnown RBP33.03■■■□□ 2.88
SLC12A4-217ENST00000576462 MADDQ8WXG6 1647 aa33.02■■■□□ 2.88
SLC12A4-217ENST00000576462 UBTFP17480 764 aaKnown RBP33.02■■■□□ 2.88
SLC12A4-217ENST00000576462 RICTORQ6R327 1708 aa33.02■■■□□ 2.88
SLC12A4-217ENST00000576462 ARHGEF40Q8TER5 1519 aa33.02■■■□□ 2.88
SLC12A4-217ENST00000576462 ATP1B4Q9UN42 357 aaPredicted RBP33.01■■■□□ 2.87
SLC12A4-217ENST00000576462 CFAP74Q9C0B2 1584 aa33■■■□□ 2.87
SLC12A4-217ENST00000576462 PLPPR3Q6T4P5 718 aa32.91■■■□□ 2.86
SLC12A4-217ENST00000576462 RIMS1Q86UR5 1692 aaKnown RBP32.9■■■□□ 2.86
SLC12A4-217ENST00000576462 YEATS2Q9ULM3 1422 aa32.89■■■□□ 2.86
SLC12A4-217ENST00000576462 ZMYM4Q5VZL5 1548 aa32.88■■■□□ 2.85
SLC12A4-217ENST00000576462 ZFYVE16Q7Z3T8 1539 aa32.88■■■□□ 2.85
SLC12A4-217ENST00000576462 FMN1Q68DA7 1419 aa32.87■■■□□ 2.85
SLC12A4-217ENST00000576462 PLCH2O75038 1416 aa32.86■■■□□ 2.85
SLC12A4-217ENST00000576462 PCF11O94913 1555 aaKnown RBP32.86■■■□□ 2.85
SLC12A4-217ENST00000576462 ARHGAP35Q9NRY4 1499 aa32.86■■■□□ 2.85
SLC12A4-217ENST00000576462 SCAPERQ9BY12 1400 aa32.85■■■□□ 2.85
SLC12A4-217ENST00000576462 POGZQ7Z3K3 1410 aa32.85■■■□□ 2.85
SLC12A4-217ENST00000576462 HECW1Q76N89 1606 aa32.84■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms