RNA–Protein interactions for RNA: ENST00000574668.1

TMEM88-202, Transcript of transmembrane protein 88, humanhuman

TSL 2 BASIC

Gene TMEM88, Length 510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-202ENST00000574668 KIF13AQ9H1H9 1805 aa28.32■■■□□ 2.12
TMEM88-202ENST00000574668 IGF1RP08069 1367 aa28.29■■■□□ 2.12
TMEM88-202ENST00000574668 KIF27Q86VH2 1401 aa28.24■■■□□ 2.11
TMEM88-202ENST00000574668 KIAA0586Q9BVV6 1533 aa28.23■■■□□ 2.11
TMEM88-202ENST00000574668 NPM1P06748 294 aaKnown RBP eCLIP28.21■■■□□ 2.11
TMEM88-202ENST00000574668 FAM69CQ0P6D2 419 aa28.21■■■□□ 2.11
TMEM88-202ENST00000574668 ADCY10Q96PN6 1610 aa28.21■■■□□ 2.11
TMEM88-202ENST00000574668 ABCC10Q5T3U5 1492 aa28.19■■■□□ 2.1
TMEM88-202ENST00000574668 CUL7Q14999 1698 aa28.19■■■□□ 2.1
TMEM88-202ENST00000574668 MAPKBP1O60336 1514 aa28.17■■■□□ 2.1
TMEM88-202ENST00000574668 DIP2BQ9P265 1576 aa28.12■■■□□ 2.09
TMEM88-202ENST00000574668 CARMIL1Q5VZK9 1371 aa28.09■■■□□ 2.09
TMEM88-202ENST00000574668 TTBK1Q5TCY1 1321 aaPredicted RBP28.07■■■□□ 2.08
TMEM88-202ENST00000574668 PTPRGP23470 1445 aa28.02■■■□□ 2.08
TMEM88-202ENST00000574668 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
TMEM88-202ENST00000574668 TNIKQ9UKE5 1360 aa27.95■■■□□ 2.06
TMEM88-202ENST00000574668 CARMIL2Q6F5E8 1435 aa27.94■■■□□ 2.06
TMEM88-202ENST00000574668 IQGAP2Q13576 1575 aa27.93■■■□□ 2.06
TMEM88-202ENST00000574668 TSPOAP1O95153 1857 aa27.93■■■□□ 2.06
TMEM88-202ENST00000574668 KDM6BO15054 1643 aa27.92■■■□□ 2.06
TMEM88-202ENST00000574668 ABCC2Q92887 1545 aa27.89■■■□□ 2.06
TMEM88-202ENST00000574668 DISP1Q96F81 1524 aa27.85■■■□□ 2.05
TMEM88-202ENST00000574668 ASXL2Q76L83 1435 aa27.84■■■□□ 2.05
TMEM88-202ENST00000574668 UACAQ9BZF9 1416 aa27.8■■■□□ 2.04
TMEM88-202ENST00000574668 UHRF1BP1LA0JNW5 1464 aa27.8■■■□□ 2.04
TMEM88-202ENST00000574668 RAPGEF2Q9Y4G8 1499 aa27.8■■■□□ 2.04
TMEM88-202ENST00000574668 KDM4FA0A1W2PPD8 638 aa27.79■■■□□ 2.04
TMEM88-202ENST00000574668 PLB1Q6P1J6 1458 aa27.78■■■□□ 2.04
TMEM88-202ENST00000574668 UGGT2Q9NYU1 1516 aa27.74■■■□□ 2.03
TMEM88-202ENST00000574668 GLI2P10070 1586 aa27.73■■■□□ 2.03
TMEM88-202ENST00000574668 PPRC1Q5VV67 1664 aaKnown RBP27.73■■■□□ 2.03
TMEM88-202ENST00000574668 KIAA0556O60303 1618 aa27.7■■■□□ 2.02
TMEM88-202ENST00000574668 KDM5BQ9UGL1 1544 aa27.69■■■□□ 2.02
TMEM88-202ENST00000574668 EPRSP07814 1512 aaKnown RBP27.67■■■□□ 2.02
TMEM88-202ENST00000574668 ZCCHC11Q5TAX3 1644 aaKnown RBP27.65■■■□□ 2.02
TMEM88-202ENST00000574668 COL17A1Q9UMD9 1497 aaPredicted RBP27.61■■■□□ 2.01
TMEM88-202ENST00000574668 MAP3K4Q9Y6R4 1608 aa27.59■■■□□ 2.01
TMEM88-202ENST00000574668 EEA1Q15075 1411 aa27.59■■■□□ 2.01
TMEM88-202ENST00000574668 FAM9AQ8IZU1 332 aaPredicted RBP27.58■■■□□ 2.01
TMEM88-202ENST00000574668 CTTNBP2Q8WZ74 1663 aa27.56■■■□□ 2
TMEM88-202ENST00000574668 CSRNP3Q8WYN3 585 aa27.54■■■□□ 2
TMEM88-202ENST00000574668 WDR7Q9Y4E6 1490 aa27.51■■■□□ 2
TMEM88-202ENST00000574668 TEX14Q8IWB6 1497 aa27.51■■□□□ 1.99
TMEM88-202ENST00000574668 ADGRL1O94910 1474 aa27.5■■□□□ 1.99
TMEM88-202ENST00000574668 GOLGA3Q08378 1498 aa27.48■■□□□ 1.99
TMEM88-202ENST00000574668 PRXQ9BXM0 1461 aa27.47■■□□□ 1.99
TMEM88-202ENST00000574668 ABCA8O94911 1581 aa27.46■■□□□ 1.99
TMEM88-202ENST00000574668 KCNH8Q96L42 1107 aa27.43■■□□□ 1.98
TMEM88-202ENST00000574668 CD109Q6YHK3 1445 aa27.38■■□□□ 1.97
TMEM88-202ENST00000574668 ARID3CA6NKF2 412 aa27.35■■□□□ 1.97
TMEM88-202ENST00000574668 P3H3Q8IVL6 736 aa27.35■■□□□ 1.97
TMEM88-202ENST00000574668 MAGI3Q5TCQ9 1506 aa27.34■■□□□ 1.97
TMEM88-202ENST00000574668 CFAP43Q8NDM7 1665 aa27.33■■□□□ 1.97
TMEM88-202ENST00000574668 ATP10BO94823 1461 aa27.25■■□□□ 1.95
TMEM88-202ENST00000574668 EHMT2Q96KQ7 1210 aa27.22■■□□□ 1.95
TMEM88-202ENST00000574668 KIF21BO75037 1637 aa27.22■■□□□ 1.95
TMEM88-202ENST00000574668 HECW2Q9P2P5 1572 aa27.18■■□□□ 1.94
TMEM88-202ENST00000574668 SAMD9Q5K651 1589 aa27.18■■□□□ 1.94
TMEM88-202ENST00000574668 UBTFP17480 764 aaKnown RBP27.14■■□□□ 1.94
TMEM88-202ENST00000574668 ILDR1Q86SU0 546 aaPredicted RBP27.14■■□□□ 1.94
TMEM88-202ENST00000574668 ARAP3Q8WWN8 1544 aa27.13■■□□□ 1.93
TMEM88-202ENST00000574668 RANGAP1P46060 587 aaPredicted RBP27.13■■□□□ 1.93
TMEM88-202ENST00000574668 RAPGEF6Q8TEU7 1601 aa27.12■■□□□ 1.93
TMEM88-202ENST00000574668 ABCA9Q8IUA7 1624 aa27.11■■□□□ 1.93
TMEM88-202ENST00000574668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.09■■□□□ 1.93
TMEM88-202ENST00000574668 HNRNPUL2Q1KMD3 747 aaKnown RBP27.09■■□□□ 1.93
TMEM88-202ENST00000574668 FHOD3Q2V2M9 1422 aa27.05■■□□□ 1.92
TMEM88-202ENST00000574668 NUP153P49790 1475 aaKnown RBP27.05■■□□□ 1.92
TMEM88-202ENST00000574668 RAPGEF3O95398 923 aa27.04■■□□□ 1.92
TMEM88-202ENST00000574668 PHLDB1Q86UU1 1377 aa27■■□□□ 1.91
TMEM88-202ENST00000574668 NEO1Q92859 1461 aa26.98■■□□□ 1.91
TMEM88-202ENST00000574668 FRMPD1Q5SYB0 1578 aa26.95■■□□□ 1.9
TMEM88-202ENST00000574668 ADAMTSL3P82987 1691 aa26.89■■□□□ 1.9
TMEM88-202ENST00000574668 PLEKHD1A6NEE1 506 aa26.89■■□□□ 1.9
TMEM88-202ENST00000574668 PTPRMP28827 1452 aa26.88■■□□□ 1.89
TMEM88-202ENST00000574668 LOC105371045A0A1W2PR82 267 aa26.87■■□□□ 1.89
TMEM88-202ENST00000574668 ARID4BQ4LE39 1312 aaPredicted RBP26.85■■□□□ 1.89
TMEM88-202ENST00000574668 EFCAB5A4FU69 1503 aa26.84■■□□□ 1.89
TMEM88-202ENST00000574668 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.84■■□□□ 1.89
TMEM88-202ENST00000574668 BCORL1Q5H9F3 1711 aa26.82■■□□□ 1.88
TMEM88-202ENST00000574668 AKNAQ7Z591 1439 aa26.82■■□□□ 1.88
TMEM88-202ENST00000574668 FANCAO15360 1455 aa26.81■■□□□ 1.88
TMEM88-202ENST00000574668 DENND4BO75064 1496 aaPredicted RBP26.81■■□□□ 1.88
TMEM88-202ENST00000574668 TTC37Q6PGP7 1564 aa26.8■■□□□ 1.88
TMEM88-202ENST00000574668 CDK13Q14004 1512 aaKnown RBP26.8■■□□□ 1.88
TMEM88-202ENST00000574668 MADDQ8WXG6 1647 aa26.79■■□□□ 1.88
TMEM88-202ENST00000574668 RICTORQ6R327 1708 aa26.79■■□□□ 1.88
TMEM88-202ENST00000574668 ARHGEF40Q8TER5 1519 aa26.78■■□□□ 1.88
TMEM88-202ENST00000574668 CFAP74Q9C0B2 1584 aa26.74■■□□□ 1.87
TMEM88-202ENST00000574668 YEATS2Q9ULM3 1422 aa26.7■■□□□ 1.86
TMEM88-202ENST00000574668 ATP1B4Q9UN42 357 aaPredicted RBP26.69■■□□□ 1.86
TMEM88-202ENST00000574668 RIMS1Q86UR5 1692 aaKnown RBP26.69■■□□□ 1.86
TMEM88-202ENST00000574668 CLIP1P30622 1438 aa26.68■■□□□ 1.86
TMEM88-202ENST00000574668 ZMYM4Q5VZL5 1548 aa26.68■■□□□ 1.86
TMEM88-202ENST00000574668 SIGLEC1Q9BZZ2 1709 aa26.67■■□□□ 1.86
TMEM88-202ENST00000574668 ARHGAP35Q9NRY4 1499 aa26.67■■□□□ 1.86
TMEM88-202ENST00000574668 PCF11O94913 1555 aaKnown RBP26.67■■□□□ 1.86
TMEM88-202ENST00000574668 ZFYVE16Q7Z3T8 1539 aa26.66■■□□□ 1.86
TMEM88-202ENST00000574668 LMTK3Q96Q04 1460 aa26.66■■□□□ 1.86
TMEM88-202ENST00000574668 PLPPR3Q6T4P5 718 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms