RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 KIF27Q86VH2 1401 aa38.71■■■■□ 3.79
SNF8-216ENST00000573795 CUL7Q14999 1698 aa38.7■■■■□ 3.79
SNF8-216ENST00000573795 KIF13AQ9H1H9 1805 aa38.69■■■■□ 3.78
SNF8-216ENST00000573795 KIAA0586Q9BVV6 1533 aa38.63■■■■□ 3.78
SNF8-216ENST00000573795 ADCY10Q96PN6 1610 aa38.55■■■■□ 3.76
SNF8-216ENST00000573795 MAPKBP1O60336 1514 aa38.48■■■■□ 3.75
SNF8-216ENST00000573795 CARMIL1Q5VZK9 1371 aa38.44■■■■□ 3.74
SNF8-216ENST00000573795 ABCC10Q5T3U5 1492 aa38.43■■■■□ 3.74
SNF8-216ENST00000573795 DIP2BQ9P265 1576 aa38.39■■■■□ 3.74
SNF8-216ENST00000573795 NPM1P06748 294 aaKnown RBP eCLIP38.34■■■■□ 3.73
SNF8-216ENST00000573795 FAM69CQ0P6D2 419 aa38.32■■■■□ 3.72
SNF8-216ENST00000573795 AEBP2Q6ZN18 517 aaPredicted RBP38.3■■■■□ 3.72
SNF8-216ENST00000573795 IQGAP2Q13576 1575 aa38.27■■■■□ 3.72
SNF8-216ENST00000573795 PTPRGP23470 1445 aa38.24■■■■□ 3.71
SNF8-216ENST00000573795 TNIKQ9UKE5 1360 aa38.19■■■■□ 3.7
SNF8-216ENST00000573795 CARMIL2Q6F5E8 1435 aa38.18■■■■□ 3.7
SNF8-216ENST00000573795 DISP1Q96F81 1524 aa38.13■■■■□ 3.69
SNF8-216ENST00000573795 ABCC2Q92887 1545 aa38.11■■■■□ 3.69
SNF8-216ENST00000573795 TTBK1Q5TCY1 1321 aaPredicted RBP38.11■■■■□ 3.69
SNF8-216ENST00000573795 RAPGEF2Q9Y4G8 1499 aa38.1■■■■□ 3.69
SNF8-216ENST00000573795 TSPOAP1O95153 1857 aa38.09■■■■□ 3.69
SNF8-216ENST00000573795 UGGT2Q9NYU1 1516 aa38.05■■■■□ 3.68
SNF8-216ENST00000573795 UHRF1BP1LA0JNW5 1464 aa38.04■■■■□ 3.68
SNF8-216ENST00000573795 KDM6BO15054 1643 aa38.02■■■■□ 3.68
SNF8-216ENST00000573795 UACAQ9BZF9 1416 aa37.98■■■■□ 3.67
SNF8-216ENST00000573795 ASXL2Q76L83 1435 aa37.97■■■■□ 3.67
SNF8-216ENST00000573795 KIAA0556O60303 1618 aa37.96■■■■□ 3.67
SNF8-216ENST00000573795 PLB1Q6P1J6 1458 aa37.93■■■■□ 3.66
SNF8-216ENST00000573795 GLI2P10070 1586 aa37.92■■■■□ 3.66
SNF8-216ENST00000573795 PPRC1Q5VV67 1664 aaKnown RBP37.92■■■■□ 3.66
SNF8-216ENST00000573795 KDM5BQ9UGL1 1544 aa37.88■■■■□ 3.65
SNF8-216ENST00000573795 CTTNBP2Q8WZ74 1663 aa37.88■■■■□ 3.65
SNF8-216ENST00000573795 ZCCHC11Q5TAX3 1644 aaKnown RBP37.83■■■■□ 3.65
SNF8-216ENST00000573795 EPRSP07814 1512 aaKnown RBP37.77■■■■□ 3.64
SNF8-216ENST00000573795 PRXQ9BXM0 1461 aa37.75■■■■□ 3.63
SNF8-216ENST00000573795 MAP3K4Q9Y6R4 1608 aa37.73■■■■□ 3.63
SNF8-216ENST00000573795 KDM4FA0A1W2PPD8 638 aa37.67■■■■□ 3.62
SNF8-216ENST00000573795 GOLGA3Q08378 1498 aa37.64■■■■□ 3.62
SNF8-216ENST00000573795 ABCA8O94911 1581 aa37.63■■■■□ 3.61
SNF8-216ENST00000573795 COL17A1Q9UMD9 1497 aaPredicted RBP37.61■■■■□ 3.61
SNF8-216ENST00000573795 WDR7Q9Y4E6 1490 aa37.59■■■■□ 3.61
SNF8-216ENST00000573795 TEX14Q8IWB6 1497 aa37.53■■■■□ 3.6
SNF8-216ENST00000573795 CFAP43Q8NDM7 1665 aa37.41■■■■□ 3.58
SNF8-216ENST00000573795 ADGRL1O94910 1474 aa37.37■■■■□ 3.57
SNF8-216ENST00000573795 MAGI3Q5TCQ9 1506 aa37.36■■■■□ 3.57
SNF8-216ENST00000573795 SAMD9Q5K651 1589 aa37.35■■■■□ 3.57
SNF8-216ENST00000573795 CD109Q6YHK3 1445 aa37.34■■■■□ 3.57
SNF8-216ENST00000573795 CSRNP3Q8WYN3 585 aa37.32■■■■□ 3.56
SNF8-216ENST00000573795 KCNH8Q96L42 1107 aa37.3■■■■□ 3.56
SNF8-216ENST00000573795 P3H3Q8IVL6 736 aa37.29■■■■□ 3.56
SNF8-216ENST00000573795 ATP10BO94823 1461 aa37.27■■■■□ 3.56
SNF8-216ENST00000573795 ARID3CA6NKF2 412 aa37.2■■■■□ 3.55
SNF8-216ENST00000573795 RAPGEF6Q8TEU7 1601 aa37.18■■■■□ 3.54
SNF8-216ENST00000573795 EEA1Q15075 1411 aa37.18■■■■□ 3.54
SNF8-216ENST00000573795 ABCA9Q8IUA7 1624 aa37.13■■■■□ 3.53
SNF8-216ENST00000573795 FAM9AQ8IZU1 332 aaPredicted RBP37.08■■■■□ 3.53
SNF8-216ENST00000573795 ARAP3Q8WWN8 1544 aa37.07■■■■□ 3.53
SNF8-216ENST00000573795 NUP153P49790 1475 aaKnown RBP37.06■■■■□ 3.52
SNF8-216ENST00000573795 FHOD3Q2V2M9 1422 aa37.03■■■■□ 3.52
SNF8-216ENST00000573795 KIF21BO75037 1637 aa37.01■■■■□ 3.52
SNF8-216ENST00000573795 RANGAP1P46060 587 aaPredicted RBP36.96■■■■□ 3.51
SNF8-216ENST00000573795 PHLDB1Q86UU1 1377 aa36.91■■■■□ 3.5
SNF8-216ENST00000573795 HECW2Q9P2P5 1572 aa36.9■■■■□ 3.5
SNF8-216ENST00000573795 EFCAB5A4FU69 1503 aa36.9■■■■□ 3.5
SNF8-216ENST00000573795 NEO1Q92859 1461 aa36.89■■■■□ 3.5
SNF8-216ENST00000573795 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.88■■■■□ 3.49
SNF8-216ENST00000573795 HNRNPUL2Q1KMD3 747 aaKnown RBP36.88■■■■□ 3.49
SNF8-216ENST00000573795 FRMPD1Q5SYB0 1578 aa36.86■■■■□ 3.49
SNF8-216ENST00000573795 RAPGEF3O95398 923 aa36.8■■■■□ 3.48
SNF8-216ENST00000573795 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.73■■■■□ 3.47
SNF8-216ENST00000573795 ADAMTSL3P82987 1691 aa36.72■■■■□ 3.47
SNF8-216ENST00000573795 PLEKHD1A6NEE1 506 aa36.71■■■■□ 3.47
SNF8-216ENST00000573795 TTC37Q6PGP7 1564 aa36.7■■■■□ 3.47
SNF8-216ENST00000573795 CDK13Q14004 1512 aaKnown RBP36.69■■■■□ 3.46
SNF8-216ENST00000573795 RICTORQ6R327 1708 aa36.68■■■■□ 3.46
SNF8-216ENST00000573795 CFAP74Q9C0B2 1584 aa36.64■■■■□ 3.46
SNF8-216ENST00000573795 AKNAQ7Z591 1439 aa36.63■■■■□ 3.45
SNF8-216ENST00000573795 FANCAO15360 1455 aa36.62■■■■□ 3.45
SNF8-216ENST00000573795 BCORL1Q5H9F3 1711 aa36.62■■■■□ 3.45
SNF8-216ENST00000573795 ARHGEF40Q8TER5 1519 aa36.62■■■■□ 3.45
SNF8-216ENST00000573795 DENND4BO75064 1496 aaPredicted RBP36.61■■■■□ 3.45
SNF8-216ENST00000573795 PTPRMP28827 1452 aa36.59■■■■□ 3.45
SNF8-216ENST00000573795 ARHGAP35Q9NRY4 1499 aa36.59■■■■□ 3.45
SNF8-216ENST00000573795 CHIC1Q5VXU3 224 aa36.59■■■■□ 3.45
SNF8-216ENST00000573795 EHMT2Q96KQ7 1210 aa36.58■■■■□ 3.45
SNF8-216ENST00000573795 ILDR1Q86SU0 546 aaPredicted RBP36.55■■■■□ 3.44
SNF8-216ENST00000573795 UBTFP17480 764 aaKnown RBP36.54■■■■□ 3.44
SNF8-216ENST00000573795 MADDQ8WXG6 1647 aa36.54■■■■□ 3.44
SNF8-216ENST00000573795 HECW1Q76N89 1606 aa36.53■■■■□ 3.44
SNF8-216ENST00000573795 ZMYM4Q5VZL5 1548 aa36.52■■■■□ 3.44
SNF8-216ENST00000573795 FMN1Q68DA7 1419 aa36.51■■■■□ 3.44
SNF8-216ENST00000573795 SIGLEC1Q9BZZ2 1709 aa36.46■■■■□ 3.43
SNF8-216ENST00000573795 PLCH2O75038 1416 aa36.45■■■■□ 3.43
SNF8-216ENST00000573795 ARID4BQ4LE39 1312 aaPredicted RBP36.44■■■■□ 3.42
SNF8-216ENST00000573795 LRRIQ1Q96JM4 1722 aa36.42■■■■□ 3.42
SNF8-216ENST00000573795 YEATS2Q9ULM3 1422 aa36.42■■■■□ 3.42
SNF8-216ENST00000573795 ZFYVE16Q7Z3T8 1539 aa36.41■■■■□ 3.42
SNF8-216ENST00000573795 KIF14Q15058 1648 aa36.4■■■■□ 3.42
SNF8-216ENST00000573795 MYO5CQ9NQX4 1742 aa36.39■■■■□ 3.42
SNF8-216ENST00000573795 RIMS1Q86UR5 1692 aaKnown RBP36.39■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms