RNA–Protein interactions for RNA: ENST00000573618.5

RSL1D1-209, Transcript of ribosomal L1 domain containing 1, humanhuman

TSL 5

Gene RSL1D1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSL1D1-209ENST00000573618 WRNQ14191 1432 aaPredicted RBP eCLIP14.53□□□□□ -0.08
RSL1D1-209ENST00000573618 REM2Q8IYK8 340 aaPredicted RBP14.52□□□□□ -0.09
RSL1D1-209ENST00000573618 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
RSL1D1-209ENST00000573618 ABCC8Q09428 1581 aa14.49□□□□□ -0.09
RSL1D1-209ENST00000573618 ERCC6Q03468 1493 aa14.45□□□□□ -0.1
RSL1D1-209ENST00000573618 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
RSL1D1-209ENST00000573618 TOP2BQ02880 1626 aa14.41□□□□□ -0.1
RSL1D1-209ENST00000573618 CUX1P39880 1505 aa14.4□□□□□ -0.1
RSL1D1-209ENST00000573618 DNMBPQ6XZF7 1577 aa14.39□□□□□ -0.11
RSL1D1-209ENST00000573618 MRC2Q9UBG0 1479 aa14.39□□□□□ -0.11
RSL1D1-209ENST00000573618 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
RSL1D1-209ENST00000573618 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
RSL1D1-209ENST00000573618 TOPBP1Q92547 1522 aa14.37□□□□□ -0.11
RSL1D1-209ENST00000573618 CLEC11AQ9Y240 323 aa14.36□□□□□ -0.11
RSL1D1-209ENST00000573618 URB2Q14146 1524 aaKnown RBP14.36□□□□□ -0.11
RSL1D1-209ENST00000573618 PITPNM1O00562 1244 aa14.35□□□□□ -0.11
RSL1D1-209ENST00000573618 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
RSL1D1-209ENST00000573618 WDR62O43379 1518 aa14.31□□□□□ -0.12
RSL1D1-209ENST00000573618 FGD5Q6ZNL6 1462 aa14.3□□□□□ -0.12
RSL1D1-209ENST00000573618 CHRDL2Q6WN34 429 aa14.29□□□□□ -0.12
RSL1D1-209ENST00000573618 PROM2Q8N271 834 aa14.29□□□□□ -0.12
RSL1D1-209ENST00000573618 SOGA1O94964 1423 aa14.29□□□□□ -0.12
RSL1D1-209ENST00000573618 POLA1P09884 1462 aaPredicted RBP14.28□□□□□ -0.12
RSL1D1-209ENST00000573618 THOC2Q8NI27 1593 aaKnown RBP14.27□□□□□ -0.12
RSL1D1-209ENST00000573618 EEA1Q15075 1411 aa14.27□□□□□ -0.12
RSL1D1-209ENST00000573618 IFT140Q96RY7 1462 aa14.22□□□□□ -0.13
RSL1D1-209ENST00000573618 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
RSL1D1-209ENST00000573618 ABCA10Q8WWZ4 1543 aa14.21□□□□□ -0.13
RSL1D1-209ENST00000573618 RAD54L2Q9Y4B4 1467 aa14.2□□□□□ -0.14
RSL1D1-209ENST00000573618 CUX2O14529 1486 aa14.19□□□□□ -0.14
RSL1D1-209ENST00000573618 FAM9AQ8IZU1 332 aaPredicted RBP14.18□□□□□ -0.14
RSL1D1-209ENST00000573618 STAG3Q9UJ98 1225 aa14.18□□□□□ -0.14
RSL1D1-209ENST00000573618 PRR29P0C7W0 189 aa14.17□□□□□ -0.14
RSL1D1-209ENST00000573618 TARBP1Q13395 1621 aaKnown RBP14.15□□□□□ -0.14
RSL1D1-209ENST00000573618 WDR97A6NE52 1622 aa14.14□□□□□ -0.15
RSL1D1-209ENST00000573618 RUSC2Q8N2Y8 1516 aa14.14□□□□□ -0.15
RSL1D1-209ENST00000573618 TDRD9Q8NDG6 1382 aaKnown RBP14.12□□□□□ -0.15
RSL1D1-209ENST00000573618 IGF1RP08069 1367 aa14.11□□□□□ -0.15
RSL1D1-209ENST00000573618 GAPVD1Q14C86 1478 aa14.11□□□□□ -0.15
RSL1D1-209ENST00000573618 PIP4P2Q8N4L2 257 aa14.09□□□□□ -0.15
RSL1D1-209ENST00000573618 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.165e-10■□□□□ 10.9
RSL1D1-209ENST00000573618 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.163e-7■■■■□ 23.3
RSL1D1-209ENST00000573618 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
RSL1D1-209ENST00000573618 ABCA5Q8WWZ7 1642 aa14.06□□□□□ -0.16
RSL1D1-209ENST00000573618 CARMIL1Q5VZK9 1371 aa14.05□□□□□ -0.16
RSL1D1-209ENST00000573618 GRIN2BQ13224 1484 aa14.05□□□□□ -0.16
RSL1D1-209ENST00000573618 ZNF608Q9ULD9 1512 aaPredicted RBP14.05□□□□□ -0.16
RSL1D1-209ENST00000573618 PRXQ9BXM0 1461 aa14.02□□□□□ -0.16
RSL1D1-209ENST00000573618 CHADLQ6NUI6 762 aa14.02□□□□□ -0.17
RSL1D1-209ENST00000573618 LOC105371045A0A1W2PR82 267 aa14.01□□□□□ -0.17
RSL1D1-209ENST00000573618 PRKAR2AP13861 404 aaKnown RBP14.01□□□□□ -0.17
RSL1D1-209ENST00000573618 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
RSL1D1-209ENST00000573618 POTEHQ6S545 545 aa14□□□□□ -0.17
RSL1D1-209ENST00000573618 CUL7Q14999 1698 aa13.99□□□□□ -0.17
RSL1D1-209ENST00000573618 KIF21BO75037 1637 aa13.99□□□□□ -0.17
RSL1D1-209ENST00000573618 EIF4G3O43432 1585 aaKnown RBP13.99□□□□□ -0.17
RSL1D1-209ENST00000573618 RAPGEF2Q9Y4G8 1499 aa13.99□□□□□ -0.17
RSL1D1-209ENST00000573618 UBTFP17480 764 aaKnown RBP13.98□□□□□ -0.17
RSL1D1-209ENST00000573618 GOLGA3Q08378 1498 aa13.98□□□□□ -0.17
RSL1D1-209ENST00000573618 FHAD1B1AJZ9 1412 aa13.98□□□□□ -0.17
RSL1D1-209ENST00000573618 PBRM1Q86U86 1689 aa13.97□□□□□ -0.17
RSL1D1-209ENST00000573618 MAGI1Q96QZ7 1491 aaPredicted RBP13.96□□□□□ -0.17
RSL1D1-209ENST00000573618 CHMP7Q8WUX9 453 aaPredicted RBP13.94□□□□□ -0.18
RSL1D1-209ENST00000573618 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
RSL1D1-209ENST00000573618 MIER1Q8N108 512 aa13.93□□□□□ -0.18
RSL1D1-209ENST00000573618 TNIKQ9UKE5 1360 aa13.93□□□□□ -0.18
RSL1D1-209ENST00000573618 SNAPC4Q5SXM2 1469 aa13.92□□□□□ -0.18
RSL1D1-209ENST00000573618 SYNJ2O15056 1496 aa13.9□□□□□ -0.18
RSL1D1-209ENST00000573618 ADAMTS12P58397 1594 aa13.88□□□□□ -0.19
RSL1D1-209ENST00000573618 PLCD3Q8N3E9 789 aa13.88□□□□□ -0.19
RSL1D1-209ENST00000573618 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
RSL1D1-209ENST00000573618 GRIN2AQ12879 1464 aa13.84□□□□□ -0.19
RSL1D1-209ENST00000573618 PLEKHG5O94827 1062 aa13.82□□□□□ -0.2
RSL1D1-209ENST00000573618 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
RSL1D1-209ENST00000573618 KIAA0586Q9BVV6 1533 aa13.78□□□□□ -0.2
RSL1D1-209ENST00000573618 NUP160Q12769 1436 aa13.77□□□□□ -0.21
RSL1D1-209ENST00000573618 CEP162Q5TB80 1403 aa13.76□□□□□ -0.21
RSL1D1-209ENST00000573618 MNX1P50219 401 aaPredicted RBP13.76□□□□□ -0.21
RSL1D1-209ENST00000573618 CTTNBP2Q8WZ74 1663 aa13.75□□□□□ -0.21
RSL1D1-209ENST00000573618 CLIP1P30622 1438 aa13.74□□□□□ -0.21
RSL1D1-209ENST00000573618 CHD1O14646 1710 aa13.73□□□□□ -0.21
RSL1D1-209ENST00000573618 HAX1O00165 279 aa13.72□□□□□ -0.21
RSL1D1-209ENST00000573618 RANGAP1P46060 587 aaPredicted RBP13.72□□□□□ -0.21
RSL1D1-209ENST00000573618 JPH4Q96JJ6 628 aa13.72□□□□□ -0.21
RSL1D1-209ENST00000573618 IQGAP2Q13576 1575 aa13.71□□□□□ -0.21
RSL1D1-209ENST00000573618 CEP170Q5SW79 1584 aa13.71□□□□□ -0.22
RSL1D1-209ENST00000573618 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
RSL1D1-209ENST00000573618 NPM1P06748 294 aaKnown RBP eCLIP13.69□□□□□ -0.22
RSL1D1-209ENST00000573618 IFNLR1Q8IU57 520 aaPredicted RBP13.67□□□□□ -0.22
RSL1D1-209ENST00000573618 EFCAB5A4FU69 1503 aa13.67□□□□□ -0.22
RSL1D1-209ENST00000573618 UGGT2Q9NYU1 1516 aa13.67□□□□□ -0.22
RSL1D1-209ENST00000573618 ZBTB47Q9UFB7 747 aaPredicted RBP13.66□□□□□ -0.22
RSL1D1-209ENST00000573618 CARMIL2Q6F5E8 1435 aa13.65□□□□□ -0.22
RSL1D1-209ENST00000573618 ARHGAP35Q9NRY4 1499 aa13.65□□□□□ -0.22
RSL1D1-209ENST00000573618 P3H3Q8IVL6 736 aa13.62□□□□□ -0.23
RSL1D1-209ENST00000573618 CLASP1Q7Z460 1538 aa13.61□□□□□ -0.23
RSL1D1-209ENST00000573618 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
RSL1D1-209ENST00000573618 SAMD9Q5K651 1589 aa13.61□□□□□ -0.23
RSL1D1-209ENST00000573618 FMN1Q68DA7 1419 aa13.59□□□□□ -0.23
RSL1D1-209ENST00000573618 VPS8Q8N3P4 1428 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms