RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 RIMBP3Q9UFD9 1639 aa17■□□□□ 0.31
NPLOC4-210ENST00000572824 AQRO60306 1485 aaKnown RBP eCLIP16.99■□□□□ 0.313e-6■■□□□ 12.9
NPLOC4-210ENST00000572824 CAPN15O75808 1086 aa16.99■□□□□ 0.31
NPLOC4-210ENST00000572824 OSCARQ8IYS5 282 aa16.99■□□□□ 0.31
NPLOC4-210ENST00000572824 TRHP20396 242 aaPredicted RBP16.98■□□□□ 0.31
NPLOC4-210ENST00000572824 CUX1P39880 1505 aa16.96■□□□□ 0.3
NPLOC4-210ENST00000572824 ABCC8Q09428 1581 aa16.95■□□□□ 0.3
NPLOC4-210ENST00000572824 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
NPLOC4-210ENST00000572824 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
NPLOC4-210ENST00000572824 WDR97A6NE52 1622 aa16.9■□□□□ 0.3
NPLOC4-210ENST00000572824 TDRD9Q8NDG6 1382 aaKnown RBP16.88■□□□□ 0.29
NPLOC4-210ENST00000572824 SUPT5HO00267 1087 aaKnown RBP16.87■□□□□ 0.29
NPLOC4-210ENST00000572824 SOGA1O94964 1423 aa16.85■□□□□ 0.29
NPLOC4-210ENST00000572824 SNAPC4Q5SXM2 1469 aa16.84■□□□□ 0.29
NPLOC4-210ENST00000572824 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
NPLOC4-210ENST00000572824 FBLN2P98095 1184 aa16.79■□□□□ 0.28
NPLOC4-210ENST00000572824 POLA2Q14181 598 aa16.79■□□□□ 0.28
NPLOC4-210ENST00000572824 ARAP1Q96P48 1450 aa16.78■□□□□ 0.28
NPLOC4-210ENST00000572824 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
NPLOC4-210ENST00000572824 CLASP1Q7Z460 1538 aa16.75■□□□□ 0.27
NPLOC4-210ENST00000572824 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
NPLOC4-210ENST00000572824 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
NPLOC4-210ENST00000572824 GRIN2BQ13224 1484 aa16.7■□□□□ 0.26
NPLOC4-210ENST00000572824 ABCB7O75027 752 aa16.7■□□□□ 0.26
NPLOC4-210ENST00000572824 MAGI1Q96QZ7 1491 aaPredicted RBP16.69■□□□□ 0.26
NPLOC4-210ENST00000572824 CYB5RLQ6IPT4 315 aa16.69■□□□□ 0.26
NPLOC4-210ENST00000572824 BIVM-ERCC5R4GMW8 1640 aa16.68■□□□□ 0.26
NPLOC4-210ENST00000572824 GAPVD1Q14C86 1478 aa16.67■□□□□ 0.26
NPLOC4-210ENST00000572824 ABCA10Q8WWZ4 1543 aa16.67■□□□□ 0.26
NPLOC4-210ENST00000572824 DSG3P32926 999 aa16.67■□□□□ 0.26
NPLOC4-210ENST00000572824 SYNJ2O15056 1496 aa16.66■□□□□ 0.26
NPLOC4-210ENST00000572824 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
NPLOC4-210ENST00000572824 ADAMTS12P58397 1594 aa16.61■□□□□ 0.25
NPLOC4-210ENST00000572824 ERCC6L2Q5T890 1561 aa16.61■□□□□ 0.25
NPLOC4-210ENST00000572824 MKRN4PQ13434 485 aaPredicted RBP16.61■□□□□ 0.25
NPLOC4-210ENST00000572824 FKBP8Q14318 412 aa16.61■□□□□ 0.25
NPLOC4-210ENST00000572824 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
NPLOC4-210ENST00000572824 WRNQ14191 1432 aaPredicted RBP eCLIP16.59■□□□□ 0.25
NPLOC4-210ENST00000572824 CEP170Q5SW79 1584 aa16.57■□□□□ 0.24
NPLOC4-210ENST00000572824 GRIN2AQ12879 1464 aa16.54■□□□□ 0.24
NPLOC4-210ENST00000572824 ZBTB12Q9Y330 459 aaPredicted RBP16.5■□□□□ 0.23
NPLOC4-210ENST00000572824 NUP160Q12769 1436 aa16.46■□□□□ 0.23
NPLOC4-210ENST00000572824 SHROOM2Q13796 1616 aa16.46■□□□□ 0.23
NPLOC4-210ENST00000572824 ERICH3Q5RHP9 1530 aa16.44■□□□□ 0.22
NPLOC4-210ENST00000572824 FHAD1B1AJZ9 1412 aa16.42■□□□□ 0.22
NPLOC4-210ENST00000572824 RUSC2Q8N2Y8 1516 aa16.39■□□□□ 0.21
NPLOC4-210ENST00000572824 SPDYE4A6NLX3 237 aa16.33■□□□□ 0.2
NPLOC4-210ENST00000572824 PRG4Q92954 1404 aaPredicted RBP16.3■□□□□ 0.2
NPLOC4-210ENST00000572824 KIF13AQ9H1H9 1805 aa16.29■□□□□ 0.2
NPLOC4-210ENST00000572824 CUL7Q14999 1698 aa16.25■□□□□ 0.19
NPLOC4-210ENST00000572824 IGF1RP08069 1367 aa16.24■□□□□ 0.19
NPLOC4-210ENST00000572824 ADCY10Q96PN6 1610 aa16.22■□□□□ 0.19
NPLOC4-210ENST00000572824 KIF27Q86VH2 1401 aa16.2■□□□□ 0.18
NPLOC4-210ENST00000572824 JPH4Q96JJ6 628 aa16.2■□□□□ 0.18
NPLOC4-210ENST00000572824 KIAA0586Q9BVV6 1533 aa16.15■□□□□ 0.18
NPLOC4-210ENST00000572824 PROM2Q8N271 834 aa16.14■□□□□ 0.17
NPLOC4-210ENST00000572824 DIP2BQ9P265 1576 aa16.11■□□□□ 0.17
NPLOC4-210ENST00000572824 CARMIL1Q5VZK9 1371 aa16.11■□□□□ 0.17
NPLOC4-210ENST00000572824 SPDYE2BA6NHP3 402 aa16.1■□□□□ 0.17
NPLOC4-210ENST00000572824 SPDYE6P0CI01 402 aa16.1■□□□□ 0.17
NPLOC4-210ENST00000572824 SPDYE2Q495Y8 402 aa16.1■□□□□ 0.17
NPLOC4-210ENST00000572824 TTBK1Q5TCY1 1321 aaPredicted RBP16.09■□□□□ 0.17
NPLOC4-210ENST00000572824 IQGAP2Q13576 1575 aa16.09■□□□□ 0.17
NPLOC4-210ENST00000572824 TSPOAP1O95153 1857 aa16.08■□□□□ 0.17
NPLOC4-210ENST00000572824 ZNF692Q9BU19 519 aaPredicted RBP16.08■□□□□ 0.16
NPLOC4-210ENST00000572824 MAPKBP1O60336 1514 aa16.07■□□□□ 0.16
NPLOC4-210ENST00000572824 ABCC10Q5T3U5 1492 aa16.04■□□□□ 0.16
NPLOC4-210ENST00000572824 DISP1Q96F81 1524 aa16.04■□□□□ 0.16
NPLOC4-210ENST00000572824 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
NPLOC4-210ENST00000572824 CTTNBP2Q8WZ74 1663 aa15.99■□□□□ 0.15
NPLOC4-210ENST00000572824 KIAA0556O60303 1618 aa15.99■□□□□ 0.15
NPLOC4-210ENST00000572824 FAM69CQ0P6D2 419 aa15.99■□□□□ 0.15
NPLOC4-210ENST00000572824 ABCC2Q92887 1545 aa15.99■□□□□ 0.15
NPLOC4-210ENST00000572824 RAPGEF2Q9Y4G8 1499 aa15.98■□□□□ 0.15
NPLOC4-210ENST00000572824 PTPRGP23470 1445 aa15.98■□□□□ 0.15
NPLOC4-210ENST00000572824 PPRC1Q5VV67 1664 aaKnown RBP15.98■□□□□ 0.15
NPLOC4-210ENST00000572824 UGGT2Q9NYU1 1516 aa15.95■□□□□ 0.14
NPLOC4-210ENST00000572824 TNIKQ9UKE5 1360 aa15.95■□□□□ 0.14
NPLOC4-210ENST00000572824 FBXO3Q9UK99 471 aa15.94■□□□□ 0.14
NPLOC4-210ENST00000572824 ZCCHC11Q5TAX3 1644 aaKnown RBP15.93■□□□□ 0.14
NPLOC4-210ENST00000572824 KDM6BO15054 1643 aa15.92■□□□□ 0.14
NPLOC4-210ENST00000572824 CARMIL2Q6F5E8 1435 aa15.92■□□□□ 0.14
NPLOC4-210ENST00000572824 NPM1P06748 294 aaKnown RBP eCLIP15.91■□□□□ 0.14
NPLOC4-210ENST00000572824 ASXL2Q76L83 1435 aa15.91■□□□□ 0.14
NPLOC4-210ENST00000572824 UACAQ9BZF9 1416 aa15.88■□□□□ 0.13
NPLOC4-210ENST00000572824 UHRF1BP1LA0JNW5 1464 aa15.88■□□□□ 0.13
NPLOC4-210ENST00000572824 PLB1Q6P1J6 1458 aa15.86■□□□□ 0.13
NPLOC4-210ENST00000572824 PRXQ9BXM0 1461 aa15.86■□□□□ 0.13
NPLOC4-210ENST00000572824 KDM5BQ9UGL1 1544 aa15.85■□□□□ 0.13
NPLOC4-210ENST00000572824 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-210ENST00000572824 MAP3K4Q9Y6R4 1608 aa15.84■□□□□ 0.13
NPLOC4-210ENST00000572824 GLI2P10070 1586 aa15.83■□□□□ 0.13
NPLOC4-210ENST00000572824 EPRSP07814 1512 aaKnown RBP15.83■□□□□ 0.12
NPLOC4-210ENST00000572824 ABCA8O94911 1581 aa15.81■□□□□ 0.12
NPLOC4-210ENST00000572824 COL17A1Q9UMD9 1497 aaPredicted RBP15.8■□□□□ 0.12
NPLOC4-210ENST00000572824 ARID3CA6NKF2 412 aa15.75■□□□□ 0.11
NPLOC4-210ENST00000572824 WDR7Q9Y4E6 1490 aa15.75■□□□□ 0.11
NPLOC4-210ENST00000572824 SAMD9Q5K651 1589 aa15.74■□□□□ 0.11
NPLOC4-210ENST00000572824 KDM4FA0A1W2PPD8 638 aa15.73■□□□□ 0.11
NPLOC4-210ENST00000572824 P3H3Q8IVL6 736 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms