RNA–Protein interactions for RNA: ENST00000571378.5

SRRM2-208, Transcript of serine/arginine repetitive matrix 2, humanhuman

TSL 1 (best)

Gene SRRM2, Length 2,870 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM2-208ENST00000571378 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
SRRM2-208ENST00000571378 AQRO60306 1485 aaKnown RBP eCLIP21.9■■□□□ 1.16e-9■■■■□ 24.4
SRRM2-208ENST00000571378 CCNB3Q8WWL7 1395 aa21.89■■□□□ 1.09
SRRM2-208ENST00000571378 PCF11O94913 1555 aaKnown RBP21.89■■□□□ 1.09
SRRM2-208ENST00000571378 KIF21AQ7Z4S6 1674 aa21.88■■□□□ 1.09
SRRM2-208ENST00000571378 LRRC9Q6ZRR7 1453 aa21.87■■□□□ 1.09
SRRM2-208ENST00000571378 FYCO1Q9BQS8 1478 aa21.87■■□□□ 1.09
SRRM2-208ENST00000571378 ZNF316A6NFI3 1004 aaPredicted RBP21.85■■□□□ 1.09
SRRM2-208ENST00000571378 DIEXFQ68CQ4 756 aaKnown RBP21.85■■□□□ 1.09
SRRM2-208ENST00000571378 DHX57Q6P158 1386 aaKnown RBP21.82■■□□□ 1.08
SRRM2-208ENST00000571378 CASKIN1Q8WXD9 1431 aa21.8■■□□□ 1.08
SRRM2-208ENST00000571378 SAMD9Q5K651 1589 aa21.8■■□□□ 1.08
SRRM2-208ENST00000571378 TARBP1Q13395 1621 aaKnown RBP21.79■■□□□ 1.08
SRRM2-208ENST00000571378 GAPVD1Q14C86 1478 aa21.78■■□□□ 1.08
SRRM2-208ENST00000571378 FMN1Q68DA7 1419 aa21.74■■□□□ 1.07
SRRM2-208ENST00000571378 THOC2Q8NI27 1593 aaKnown RBP21.73■■□□□ 1.07
SRRM2-208ENST00000571378 PBRM1Q86U86 1689 aa21.73■■□□□ 1.07
SRRM2-208ENST00000571378 FHOD3Q2V2M9 1422 aa21.72■■□□□ 1.07
SRRM2-208ENST00000571378 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.69■■□□□ 1.065e-15■■■□□ 16.5
SRRM2-208ENST00000571378 SNAPC4Q5SXM2 1469 aa21.69■■□□□ 1.06
SRRM2-208ENST00000571378 PHLDB1Q86UU1 1377 aa21.66■■□□□ 1.06
SRRM2-208ENST00000571378 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.06
SRRM2-208ENST00000571378 TDRD9Q8NDG6 1382 aaKnown RBP21.64■■□□□ 1.06
SRRM2-208ENST00000571378 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
SRRM2-208ENST00000571378 LRRIQ1Q96JM4 1722 aa21.6■■□□□ 1.05
SRRM2-208ENST00000571378 SETD5Q9C0A6 1442 aa21.6■■□□□ 1.05
SRRM2-208ENST00000571378 GRIN2BQ13224 1484 aa21.59■■□□□ 1.05
SRRM2-208ENST00000571378 RAB3GAP2Q9H2M9 1393 aa21.58■■□□□ 1.05
SRRM2-208ENST00000571378 P3H3Q8IVL6 736 aa21.55■■□□□ 1.04
SRRM2-208ENST00000571378 CENPBP07199 599 aaPredicted RBP21.55■■□□□ 1.04
SRRM2-208ENST00000571378 MAPKBP1O60336 1514 aa21.54■■□□□ 1.04
SRRM2-208ENST00000571378 ACIN1Q9UKV3 1341 aaKnown RBP21.54■■□□□ 1.04
SRRM2-208ENST00000571378 WDR62O43379 1518 aa21.53■■□□□ 1.04
SRRM2-208ENST00000571378 EHBP1L1Q8N3D4 1523 aa21.53■■□□□ 1.04
SRRM2-208ENST00000571378 SUPT6HQ7KZ85 1726 aaKnown RBP21.53■■□□□ 1.04
SRRM2-208ENST00000571378 IQGAP2Q13576 1575 aa21.52■■□□□ 1.04
SRRM2-208ENST00000571378 CCDC18Q5T9S5 1454 aa21.52■■□□□ 1.04
SRRM2-208ENST00000571378 SCAF1Q9H7N4 1312 aaKnown RBP21.51■■□□□ 1.03
SRRM2-208ENST00000571378 IFT140Q96RY7 1462 aa21.51■■□□□ 1.03
SRRM2-208ENST00000571378 HECW1Q76N89 1606 aa21.5■■□□□ 1.03
SRRM2-208ENST00000571378 FGD6Q6ZV73 1430 aa21.49■■□□□ 1.03
SRRM2-208ENST00000571378 ARHGEF11O15085 1522 aa21.45■■□□□ 1.02
SRRM2-208ENST00000571378 MTUS2Q5JR59 1369 aa21.45■■□□□ 1.02
SRRM2-208ENST00000571378 ITGAEP38570 1179 aa21.44■■□□□ 1.02
SRRM2-208ENST00000571378 UGGT2Q9NYU1 1516 aa21.44■■□□□ 1.02
SRRM2-208ENST00000571378 ATP1B4Q9UN42 357 aaPredicted RBP21.43■■□□□ 1.02
SRRM2-208ENST00000571378 FAM50AQ14320 339 aaKnown RBP21.43■■□□□ 1.02
SRRM2-208ENST00000571378 NCOA2Q15596 1464 aa21.42■■□□□ 1.02
SRRM2-208ENST00000571378 MYOM3Q5VTT5 1437 aa21.41■■□□□ 1.02
SRRM2-208ENST00000571378 NEUROD1Q13562 356 aa21.4■■□□□ 1.02
SRRM2-208ENST00000571378 ERCC6Q03468 1493 aa21.38■■□□□ 1.01
SRRM2-208ENST00000571378 TIMELESSQ9UNS1 1208 aa21.37■■□□□ 1.01
SRRM2-208ENST00000571378 PTPN23Q9H3S7 1636 aa21.36■■□□□ 1.01
SRRM2-208ENST00000571378 HFM1A2PYH4 1435 aa21.35■■□□□ 1.01
SRRM2-208ENST00000571378 TCOF1Q13428 1488 aaKnown RBP21.34■■□□□ 1.01
SRRM2-208ENST00000571378 MIER1Q8N108 512 aa21.34■■□□□ 1.01
SRRM2-208ENST00000571378 EIF4G3O43432 1585 aaKnown RBP21.34■■□□□ 1.01
SRRM2-208ENST00000571378 MAGI3Q5TCQ9 1506 aa21.33■■□□□ 1
SRRM2-208ENST00000571378 EPRSP07814 1512 aaKnown RBP21.32■■□□□ 1
SRRM2-208ENST00000571378 KIAA0586Q9BVV6 1533 aa21.32■■□□□ 1
SRRM2-208ENST00000571378 KIAA0556O60303 1618 aa21.31■■□□□ 1
SRRM2-208ENST00000571378 GCC2Q8IWJ2 1684 aa21.3■■□□□ 1
SRRM2-208ENST00000571378 ZNF608Q9ULD9 1512 aaPredicted RBP21.29■■□□□ 1
SRRM2-208ENST00000571378 AKNAQ7Z591 1439 aa21.27■■□□□ 1
SRRM2-208ENST00000571378 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
SRRM2-208ENST00000571378 MAGI1Q96QZ7 1491 aaPredicted RBP21.26■□□□□ 0.99
SRRM2-208ENST00000571378 UACAQ9BZF9 1416 aa21.26■□□□□ 0.99
SRRM2-208ENST00000571378 MIA2Q96PC5 1412 aa21.25■□□□□ 0.99
SRRM2-208ENST00000571378 PTPRKQ15262 1439 aa21.24■□□□□ 0.99
SRRM2-208ENST00000571378 NAIPQ13075 1403 aa21.23■□□□□ 0.99
SRRM2-208ENST00000571378 DISP1Q96F81 1524 aa21.23■□□□□ 0.99
SRRM2-208ENST00000571378 RAPGEF6Q8TEU7 1601 aa21.21■□□□□ 0.99
SRRM2-208ENST00000571378 CDK13Q14004 1512 aaKnown RBP21.19■□□□□ 0.98
SRRM2-208ENST00000571378 SYNJ2O15056 1496 aa21.16■□□□□ 0.98
SRRM2-208ENST00000571378 GTF3C3Q9Y5Q9 886 aa21.15■□□□□ 0.98
SRRM2-208ENST00000571378 CEP170Q5SW79 1584 aa21.12■□□□□ 0.97
SRRM2-208ENST00000571378 NUP153P49790 1475 aaKnown RBP21.11■□□□□ 0.97
SRRM2-208ENST00000571378 SIN3AQ96ST3 1273 aa21.11■□□□□ 0.97
SRRM2-208ENST00000571378 ADCY10Q96PN6 1610 aa21.1■□□□□ 0.97
SRRM2-208ENST00000571378 PELP1Q8IZL8 1130 aaKnown RBP21.1■□□□□ 0.97
SRRM2-208ENST00000571378 DNMT1P26358 1616 aaKnown RBP21.09■□□□□ 0.97
SRRM2-208ENST00000571378 ITSN2Q9NZM3 1697 aa21.08■□□□□ 0.97
SRRM2-208ENST00000571378 PPP1R15AO75807 674 aaPredicted RBP21.08■□□□□ 0.96
SRRM2-208ENST00000571378 YTHDC1Q96MU7 727 aaKnown RBP21.08■□□□□ 0.96
SRRM2-208ENST00000571378 NUP160Q12769 1436 aa21.07■□□□□ 0.96
SRRM2-208ENST00000571378 ROCK1Q13464 1354 aa21.05■□□□□ 0.96
SRRM2-208ENST00000571378 TONSLQ96HA7 1378 aa21.04■□□□□ 0.96
SRRM2-208ENST00000571378 CDK11AQ9UQ88 783 aaPredicted RBP21.01■□□□□ 0.95
SRRM2-208ENST00000571378 DAPK1P53355 1430 aa21■□□□□ 0.95
SRRM2-208ENST00000571378 CARMIL2Q6F5E8 1435 aa21■□□□□ 0.95
SRRM2-208ENST00000571378 ADGBQ8N7X0 1667 aa21■□□□□ 0.95
SRRM2-208ENST00000571378 TROQ12816 1431 aaPredicted RBP20.99■□□□□ 0.95
SRRM2-208ENST00000571378 KDM5BQ9UGL1 1544 aa20.99■□□□□ 0.95
SRRM2-208ENST00000571378 KDM6BO15054 1643 aa20.99■□□□□ 0.95
SRRM2-208ENST00000571378 CROCC2H7BZ55 1655 aa20.96■□□□□ 0.95
SRRM2-208ENST00000571378 CHMP7Q8WUX9 453 aaPredicted RBP20.96■□□□□ 0.95
SRRM2-208ENST00000571378 DENND4BO75064 1496 aaPredicted RBP20.95■□□□□ 0.94
SRRM2-208ENST00000571378 ABCA8O94911 1581 aa20.94■□□□□ 0.94
SRRM2-208ENST00000571378 ABCC5O15440 1437 aa20.94■□□□□ 0.94
SRRM2-208ENST00000571378 RRP7BPQ9NSQ0 103 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms