RNA–Protein interactions for RNA: ENST00000570802.5

SLC12A4-206, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 3,761 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-206ENST00000570802 MRC2Q9UBG0 1479 aa15.61■□□□□ 0.09
SLC12A4-206ENST00000570802 LAMC3Q9Y6N6 1575 aa15.6■□□□□ 0.09
SLC12A4-206ENST00000570802 TOPBP1Q92547 1522 aa15.59■□□□□ 0.09
SLC12A4-206ENST00000570802 RAPGEF2Q9Y4G8 1499 aa15.57■□□□□ 0.08
SLC12A4-206ENST00000570802 CUX1P39880 1505 aa15.56■□□□□ 0.08
SLC12A4-206ENST00000570802 SYNJ1O43426 1573 aa15.56■□□□□ 0.08
SLC12A4-206ENST00000570802 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
SLC12A4-206ENST00000570802 POLA1P09884 1462 aaPredicted RBP15.55■□□□□ 0.08
SLC12A4-206ENST00000570802 DDX10Q13206 875 aaKnown RBP15.52■□□□□ 0.07
SLC12A4-206ENST00000570802 POLR3GLQ9BT43 218 aa15.51■□□□□ 0.07
SLC12A4-206ENST00000570802 KCNH8Q96L42 1107 aa15.5■□□□□ 0.07
SLC12A4-206ENST00000570802 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
SLC12A4-206ENST00000570802 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
SLC12A4-206ENST00000570802 ZNF608Q9ULD9 1512 aaPredicted RBP15.49■□□□□ 0.07
SLC12A4-206ENST00000570802 CYB5RLQ6IPT4 315 aa15.49■□□□□ 0.07
SLC12A4-206ENST00000570802 VPS8Q8N3P4 1428 aa15.48■□□□□ 0.07
SLC12A4-206ENST00000570802 NPM1P06748 294 aaKnown RBP eCLIP15.48■□□□□ 0.07
SLC12A4-206ENST00000570802 TRIM52Q96A61 297 aa15.47■□□□□ 0.07
SLC12A4-206ENST00000570802 SIN3AQ96ST3 1273 aa15.47■□□□□ 0.07
SLC12A4-206ENST00000570802 IGF1RP08069 1367 aa15.47■□□□□ 0.07
SLC12A4-206ENST00000570802 ZNF777Q9ULD5 760 aaPredicted RBP15.45■□□□□ 0.06
SLC12A4-206ENST00000570802 JPH4Q96JJ6 628 aa15.44■□□□□ 0.06
SLC12A4-206ENST00000570802 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
SLC12A4-206ENST00000570802 CHIC2Q9UKJ5 165 aa15.43■□□□□ 0.06
SLC12A4-206ENST00000570802 NEFLP07196 543 aa15.41■□□□□ 0.06
SLC12A4-206ENST00000570802 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
SLC12A4-206ENST00000570802 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
SLC12A4-206ENST00000570802 IFT140Q96RY7 1462 aa15.37■□□□□ 0.05
SLC12A4-206ENST00000570802 TOP2BQ02880 1626 aa15.34■□□□□ 0.05
SLC12A4-206ENST00000570802 SNAPC4Q5SXM2 1469 aa15.34■□□□□ 0.05
SLC12A4-206ENST00000570802 ZNF326Q5BKZ1 582 aaKnown RBP15.33■□□□□ 0.04
SLC12A4-206ENST00000570802 GRIN2BQ13224 1484 aa15.32■□□□□ 0.04
SLC12A4-206ENST00000570802 CCNB3Q8WWL7 1395 aa15.32■□□□□ 0.04
SLC12A4-206ENST00000570802 RRP7BPQ9NSQ0 103 aa15.3■□□□□ 0.04
SLC12A4-206ENST00000570802 ANP32CO43423 234 aa15.3■□□□□ 0.04
SLC12A4-206ENST00000570802 FKBP8Q14318 412 aa15.28■□□□□ 0.04
SLC12A4-206ENST00000570802 PLPPR3Q6T4P5 718 aa15.28■□□□□ 0.04
SLC12A4-206ENST00000570802 CDK11AQ9UQ88 783 aaPredicted RBP15.28■□□□□ 0.04
SLC12A4-206ENST00000570802 FHOD3Q2V2M9 1422 aa15.26■□□□□ 0.03
SLC12A4-206ENST00000570802 SENP3-EIF4A1A0A087X0R7 540 aa15.26■□□□□ 0.03
SLC12A4-206ENST00000570802 EIF5BO60841 1220 aaKnown RBP15.25■□□□□ 0.03
SLC12A4-206ENST00000570802 DHX57Q6P158 1386 aaKnown RBP15.25■□□□□ 0.03
SLC12A4-206ENST00000570802 MTUS2Q5JR59 1369 aa15.24■□□□□ 0.03
SLC12A4-206ENST00000570802 PLEKHD1A6NEE1 506 aa15.24■□□□□ 0.03
SLC12A4-206ENST00000570802 KIF21BO75037 1637 aa15.23■□□□□ 0.03
SLC12A4-206ENST00000570802 TONSLQ96HA7 1378 aa15.23■□□□□ 0.03
SLC12A4-206ENST00000570802 FHAD1B1AJZ9 1412 aa15.23■□□□□ 0.03
SLC12A4-206ENST00000570802 RAB3GAP2Q9H2M9 1393 aa15.23■□□□□ 0.03
SLC12A4-206ENST00000570802 ANP32EQ9BTT0 268 aa15.23■□□□□ 0.03
SLC12A4-206ENST00000570802 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
SLC12A4-206ENST00000570802 IRX6P78412 446 aaPredicted RBP15.21■□□□□ 0.03
SLC12A4-206ENST00000570802 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
SLC12A4-206ENST00000570802 CARMIL2Q6F5E8 1435 aa15.19■□□□□ 0.02
SLC12A4-206ENST00000570802 HNRNPUQ00839 825 aaKnown RBP eCLIP15.15■□□□□ 0.02
SLC12A4-206ENST00000570802 WDR62O43379 1518 aa15.15■□□□□ 0.02
SLC12A4-206ENST00000570802 PTPRGP23470 1445 aa15.15■□□□□ 0.02
SLC12A4-206ENST00000570802 SUPT16HQ9Y5B9 1047 aaKnown RBP15.15■□□□□ 0.02
SLC12A4-206ENST00000570802 FOXD1Q16676 465 aa15.14■□□□□ 0.01
SLC12A4-206ENST00000570802 PRG4Q92954 1404 aaPredicted RBP15.14■□□□□ 0.01
SLC12A4-206ENST00000570802 FAM9BQ8IZU0 186 aa15.12■□□□□ 0.01
SLC12A4-206ENST00000570802 CLSPNQ9HAW4 1339 aa15.11■□□□□ 0.01
SLC12A4-206ENST00000570802 BIVM-ERCC5R4GMW8 1640 aa15.09■□□□□ 0.01
SLC12A4-206ENST00000570802 SETD5Q9C0A6 1442 aa15.09■□□□□ 0.01
SLC12A4-206ENST00000570802 SYNJ2O15056 1496 aa15.08■□□□□ 0
SLC12A4-206ENST00000570802 PRXQ9BXM0 1461 aa15.07■□□□□ 0
SLC12A4-206ENST00000570802 GRIN2AQ12879 1464 aa15.06■□□□□ 0
SLC12A4-206ENST00000570802 EIF4G3O43432 1585 aaKnown RBP15.06■□□□□ 0
SLC12A4-206ENST00000570802 PHLDB1Q86UU1 1377 aa15.05■□□□□ 0
SLC12A4-206ENST00000570802 CFDP1Q9UEE9 299 aaPredicted RBP15.05■□□□□ 0
SLC12A4-206ENST00000570802 ARHGAP35Q9NRY4 1499 aa15.05■□□□□ -0
SLC12A4-206ENST00000570802 THOC2Q8NI27 1593 aaKnown RBP15.05■□□□□ -0
SLC12A4-206ENST00000570802 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
SLC12A4-206ENST00000570802 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.02■□□□□ -01e-8■■□□□ 12
SLC12A4-206ENST00000570802 FAM69CQ0P6D2 419 aa15□□□□□ -0.01
SLC12A4-206ENST00000570802 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
SLC12A4-206ENST00000570802 SENP3Q9H4L4 574 aaPredicted RBP15□□□□□ -0.01
SLC12A4-206ENST00000570802 KDM2AQ9Y2K7 1162 aa14.99□□□□□ -0.01
SLC12A4-206ENST00000570802 PPP1R15AO75807 674 aaPredicted RBP14.99□□□□□ -0.01
SLC12A4-206ENST00000570802 SLC4A1APQ9BWU0 796 aaKnown RBP14.99□□□□□ -0.01
SLC12A4-206ENST00000570802 PRDM2Q13029 1718 aa14.98□□□□□ -0.01
SLC12A4-206ENST00000570802 ERICH3Q5RHP9 1530 aa14.98□□□□□ -0.01
SLC12A4-206ENST00000570802 TSPY4P0CV99 314 aa14.96□□□□□ -0.01
SLC12A4-206ENST00000570802 TSPY10P0CW01 314 aa14.96□□□□□ -0.01
SLC12A4-206ENST00000570802 MLECQ14165 292 aa14.96□□□□□ -0.01
SLC12A4-206ENST00000570802 FMN1Q68DA7 1419 aa14.96□□□□□ -0.01
SLC12A4-206ENST00000570802 TARBP1Q13395 1621 aaKnown RBP14.96□□□□□ -0.02
SLC12A4-206ENST00000570802 ARID4BQ4LE39 1312 aaPredicted RBP14.95□□□□□ -0.02
SLC12A4-206ENST00000570802 MRS2Q9HD23 443 aa14.95□□□□□ -0.02
SLC12A4-206ENST00000570802 KIAA0586Q9BVV6 1533 aa14.95□□□□□ -0.02
SLC12A4-206ENST00000570802 EIF4G2P78344 907 aaKnown RBP eCLIP14.94□□□□□ -0.029e-7■■■■■ 27.1
SLC12A4-206ENST00000570802 ANO8Q9HCE9 1232 aaPredicted RBP14.94□□□□□ -0.02
SLC12A4-206ENST00000570802 HNRNPMP52272 730 aaKnown RBP eCLIP14.9□□□□□ -0.02
SLC12A4-206ENST00000570802 HSPA5P11021 654 aaKnown RBP14.9□□□□□ -0.02
SLC12A4-206ENST00000570802 RRBP1Q9P2E9 1410 aaKnown RBP14.9□□□□□ -0.02
SLC12A4-206ENST00000570802 PLB1Q6P1J6 1458 aa14.9□□□□□ -0.02
SLC12A4-206ENST00000570802 CCDC136Q96JN2 1154 aa14.89□□□□□ -0.03
SLC12A4-206ENST00000570802 ESF1Q9H501 851 aaKnown RBP14.88□□□□□ -0.03
SLC12A4-206ENST00000570802 LRRC9Q6ZRR7 1453 aa14.88□□□□□ -0.03
SLC12A4-206ENST00000570802 IQGAP2Q13576 1575 aa14.87□□□□□ -0.03
SLC12A4-206ENST00000570802 ZNF644Q9H582 1327 aaPredicted RBP14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms