RNA–Protein interactions for RNA: ENST00000570802.5

SLC12A4-206, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 3,761 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-206ENST00000570802 NISCHQ9Y2I1 1504 aa21.42■■□□□ 1.02
SLC12A4-206ENST00000570802 DCAF8L2P0C7V8 631 aa19.87■□□□□ 0.77
SLC12A4-206ENST00000570802 SHROOM4Q9ULL8 1493 aa19.08■□□□□ 0.65
SLC12A4-206ENST00000570802 SUPT5HO00267 1087 aaKnown RBP18.93■□□□□ 0.62
SLC12A4-206ENST00000570802 ABCC9O60706 1549 aa18.81■□□□□ 0.6
SLC12A4-206ENST00000570802 CCDC180Q9P1Z9 1646 aa18.18■□□□□ 0.5
SLC12A4-206ENST00000570802 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.58e-7■■□□□ 11.4
SLC12A4-206ENST00000570802 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
SLC12A4-206ENST00000570802 PCGF6Q9BYE7 350 aa17.81■□□□□ 0.44
SLC12A4-206ENST00000570802 ZCCHC6Q5VYS8 1495 aaKnown RBP17.76■□□□□ 0.43
SLC12A4-206ENST00000570802 FAM9AQ8IZU1 332 aaPredicted RBP17.7■□□□□ 0.42
SLC12A4-206ENST00000570802 PELP1Q8IZL8 1130 aaKnown RBP17.7■□□□□ 0.42
SLC12A4-206ENST00000570802 CHIC1Q5VXU3 224 aa17.68■□□□□ 0.42
SLC12A4-206ENST00000570802 SCRIBQ14160 1630 aa17.63■□□□□ 0.41
SLC12A4-206ENST00000570802 LOC105371045A0A1W2PR82 267 aa17.61■□□□□ 0.41
SLC12A4-206ENST00000570802 RB1CC1Q8TDY2 1594 aa17.51■□□□□ 0.39
SLC12A4-206ENST00000570802 MYT1Q01538 1121 aa17.45■□□□□ 0.38
SLC12A4-206ENST00000570802 NACADO15069 1562 aa17.4■□□□□ 0.38
SLC12A4-206ENST00000570802 PPARGC1BQ86YN6 1023 aaKnown RBP17.36■□□□□ 0.37
SLC12A4-206ENST00000570802 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
SLC12A4-206ENST00000570802 TTBK1Q5TCY1 1321 aaPredicted RBP17.34■□□□□ 0.37
SLC12A4-206ENST00000570802 HRCP23327 699 aa17.27■□□□□ 0.36
SLC12A4-206ENST00000570802 MYO15BQ96JP2 1530 aa17.23■□□□□ 0.35
SLC12A4-206ENST00000570802 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
SLC12A4-206ENST00000570802 CECR2Q9BXF3 1484 aa17.01■□□□□ 0.31
SLC12A4-206ENST00000570802 TRIM26Q12899 539 aaPredicted RBP17■□□□□ 0.31
SLC12A4-206ENST00000570802 RANGAP1P46060 587 aaPredicted RBP16.97■□□□□ 0.31
SLC12A4-206ENST00000570802 DNAJC5BQ9UF47 199 aa16.82■□□□□ 0.28
SLC12A4-206ENST00000570802 CCER1Q8TC90 406 aaPredicted RBP16.8■□□□□ 0.28
SLC12A4-206ENST00000570802 UBTFP17480 764 aaKnown RBP16.78■□□□□ 0.28
SLC12A4-206ENST00000570802 RSF1Q96T23 1441 aaPredicted RBP16.76■□□□□ 0.27
SLC12A4-206ENST00000570802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.72■□□□□ 0.27
SLC12A4-206ENST00000570802 MROH2BQ7Z745 1585 aa16.71■□□□□ 0.27
SLC12A4-206ENST00000570802 BICRAQ9NZM4 1560 aa16.64■□□□□ 0.25
SLC12A4-206ENST00000570802 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
SLC12A4-206ENST00000570802 BAZ1BQ9UIG0 1483 aaKnown RBP16.62■□□□□ 0.25
SLC12A4-206ENST00000570802 BAZ1AQ9NRL2 1556 aaPredicted RBP16.6■□□□□ 0.25
SLC12A4-206ENST00000570802 UNC13AQ9UPW8 1703 aa16.56■□□□□ 0.24
SLC12A4-206ENST00000570802 APLP2Q06481 763 aa16.54■□□□□ 0.24
SLC12A4-206ENST00000570802 WIZO95785 1651 aa16.5■□□□□ 0.23
SLC12A4-206ENST00000570802 EIF4G1Q04637 1599 aaKnown RBP16.5■□□□□ 0.23
SLC12A4-206ENST00000570802 HNRNPUL2Q1KMD3 747 aaKnown RBP16.48■□□□□ 0.23
SLC12A4-206ENST00000570802 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
SLC12A4-206ENST00000570802 YTHDC1Q96MU7 727 aaKnown RBP16.44■□□□□ 0.22
SLC12A4-206ENST00000570802 FBLN2P98095 1184 aa16.43■□□□□ 0.22
SLC12A4-206ENST00000570802 SMARCA4P51532 1647 aa16.42■□□□□ 0.22
SLC12A4-206ENST00000570802 CC2D2AQ9P2K1 1620 aa16.38■□□□□ 0.21
SLC12A4-206ENST00000570802 SMARCA2P51531 1590 aa16.34■□□□□ 0.21
SLC12A4-206ENST00000570802 ERCC6Q03468 1493 aa16.32■□□□□ 0.2
SLC12A4-206ENST00000570802 ATP1B4Q9UN42 357 aaPredicted RBP16.32■□□□□ 0.2
SLC12A4-206ENST00000570802 CCDC88BA6NC98 1476 aa16.3■□□□□ 0.2
SLC12A4-206ENST00000570802 ITGAEP38570 1179 aa16.29■□□□□ 0.2
SLC12A4-206ENST00000570802 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
SLC12A4-206ENST00000570802 DIEXFQ68CQ4 756 aaKnown RBP16.24■□□□□ 0.19
SLC12A4-206ENST00000570802 NCAPD3P42695 1498 aa16.19■□□□□ 0.18
SLC12A4-206ENST00000570802 NESP48681 1621 aa16.19■□□□□ 0.18
SLC12A4-206ENST00000570802 ERICH6Q7L0X2 663 aa16.18■□□□□ 0.18
SLC12A4-206ENST00000570802 CENPBP07199 599 aaPredicted RBP16.17■□□□□ 0.18
SLC12A4-206ENST00000570802 CADPSQ9ULU8 1353 aa16.15■□□□□ 0.18
SLC12A4-206ENST00000570802 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
SLC12A4-206ENST00000570802 PRKCSHP14314 528 aaPredicted RBP16.11■□□□□ 0.17
SLC12A4-206ENST00000570802 SOGA1O94964 1423 aa16.07■□□□□ 0.16
SLC12A4-206ENST00000570802 ABCC8Q09428 1581 aa16.07■□□□□ 0.16
SLC12A4-206ENST00000570802 P3H3Q8IVL6 736 aa16.06■□□□□ 0.16
SLC12A4-206ENST00000570802 PDS5BQ9NTI5 1447 aa16.05■□□□□ 0.16
SLC12A4-206ENST00000570802 SCAF1Q9H7N4 1312 aaKnown RBP16.05■□□□□ 0.16
SLC12A4-206ENST00000570802 WRNQ14191 1432 aaPredicted RBP eCLIP16.04■□□□□ 0.16
SLC12A4-206ENST00000570802 GTF3C3Q9Y5Q9 886 aa16.02■□□□□ 0.16
SLC12A4-206ENST00000570802 ARID3CA6NKF2 412 aa16.02■□□□□ 0.15
SLC12A4-206ENST00000570802 BCL11AQ9H165 835 aa16.01■□□□□ 0.15
SLC12A4-206ENST00000570802 CEP162Q5TB80 1403 aa16■□□□□ 0.15
SLC12A4-206ENST00000570802 NEUROD1Q13562 356 aa15.99■□□□□ 0.15
SLC12A4-206ENST00000570802 TDRD9Q8NDG6 1382 aaKnown RBP15.97■□□□□ 0.15
SLC12A4-206ENST00000570802 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
SLC12A4-206ENST00000570802 CHMP7Q8WUX9 453 aaPredicted RBP15.97■□□□□ 0.15
SLC12A4-206ENST00000570802 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
SLC12A4-206ENST00000570802 ACIN1Q9UKV3 1341 aaKnown RBP15.92■□□□□ 0.14
SLC12A4-206ENST00000570802 CEP164Q9UPV0 1460 aa15.91■□□□□ 0.14
SLC12A4-206ENST00000570802 RUSC2Q8N2Y8 1516 aa15.9■□□□□ 0.14
SLC12A4-206ENST00000570802 HMGXB3Q12766 1538 aa15.9■□□□□ 0.14
SLC12A4-206ENST00000570802 FAM50AQ14320 339 aaKnown RBP15.84■□□□□ 0.13
SLC12A4-206ENST00000570802 CUX2O14529 1486 aa15.82■□□□□ 0.12
SLC12A4-206ENST00000570802 CFTRP13569 1480 aa15.81■□□□□ 0.12
SLC12A4-206ENST00000570802 CLIP1P30622 1438 aa15.81■□□□□ 0.12
SLC12A4-206ENST00000570802 TNIKQ9UKE5 1360 aa15.8■□□□□ 0.12
SLC12A4-206ENST00000570802 MIER1Q8N108 512 aa15.8■□□□□ 0.12
SLC12A4-206ENST00000570802 RAD54L2Q9Y4B4 1467 aa15.79■□□□□ 0.12
SLC12A4-206ENST00000570802 PEG3Q9GZU2 1588 aa15.75■□□□□ 0.11
SLC12A4-206ENST00000570802 GOLGA3Q08378 1498 aa15.74■□□□□ 0.11
SLC12A4-206ENST00000570802 KIF27Q86VH2 1401 aa15.72■□□□□ 0.11
SLC12A4-206ENST00000570802 AQRO60306 1485 aaKnown RBP eCLIP15.7■□□□□ 0.12e-7■■■■■ 35
SLC12A4-206ENST00000570802 CNGB1Q14028 1251 aaPredicted RBP15.69■□□□□ 0.1
SLC12A4-206ENST00000570802 FGD5Q6ZNL6 1462 aa15.69■□□□□ 0.1
SLC12A4-206ENST00000570802 HIRIP3Q9BW71 556 aaPredicted RBP15.65■□□□□ 0.1
SLC12A4-206ENST00000570802 KANK4Q5T7N3 995 aaPredicted RBP15.65■□□□□ 0.1
SLC12A4-206ENST00000570802 EEA1Q15075 1411 aa15.63■□□□□ 0.09
SLC12A4-206ENST00000570802 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
SLC12A4-206ENST00000570802 MYT1LQ9UL68 1186 aa15.62■□□□□ 0.09
SLC12A4-206ENST00000570802 BCANQ96GW7 911 aa15.62■□□□□ 0.09
SLC12A4-206ENST00000570802 SLC24A1O60721 1099 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms