RNA–Protein interactions for RNA: ENST00000569352.6

CNN2-210, Transcript of calponin 2, humanhuman

TSL 5

Gene CNN2, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-210ENST00000569352 EHMT2Q96KQ7 1210 aa24.31■■□□□ 1.48
CNN2-210ENST00000569352 CLASP1Q7Z460 1538 aa24.27■■□□□ 1.48
CNN2-210ENST00000569352 JPH4Q96JJ6 628 aa24.23■■□□□ 1.47
CNN2-210ENST00000569352 CTTNBP2Q8WZ74 1663 aa24.23■■□□□ 1.47
CNN2-210ENST00000569352 IQGAP2Q13576 1575 aa24.22■■□□□ 1.47
CNN2-210ENST00000569352 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.46
CNN2-210ENST00000569352 TNIKQ9UKE5 1360 aa24.18■■□□□ 1.46
CNN2-210ENST00000569352 SHROOM2Q13796 1616 aa24.13■■□□□ 1.45
CNN2-210ENST00000569352 UGGT2Q9NYU1 1516 aa24.11■■□□□ 1.45
CNN2-210ENST00000569352 PRG4Q92954 1404 aaPredicted RBP24.1■■□□□ 1.45
CNN2-210ENST00000569352 DNAJC5Q9H3Z4 198 aa24.09■■□□□ 1.45
CNN2-210ENST00000569352 CARMIL2Q6F5E8 1435 aa24.09■■□□□ 1.45
CNN2-210ENST00000569352 RANGAP1P46060 587 aaPredicted RBP24.05■■□□□ 1.44
CNN2-210ENST00000569352 ARHGEF11O15085 1522 aa24■■□□□ 1.43
CNN2-210ENST00000569352 DISP1Q96F81 1524 aa24■■□□□ 1.43
CNN2-210ENST00000569352 EFCAB5A4FU69 1503 aa23.99■■□□□ 1.43
CNN2-210ENST00000569352 KIAA0556O60303 1618 aa23.96■■□□□ 1.43
CNN2-210ENST00000569352 CLIP1P30622 1438 aa23.96■■□□□ 1.43
CNN2-210ENST00000569352 SAMD9Q5K651 1589 aa23.95■■□□□ 1.43
CNN2-210ENST00000569352 CEP162Q5TB80 1403 aa23.95■■□□□ 1.42
CNN2-210ENST00000569352 ERCC6L2Q5T890 1561 aa23.94■■□□□ 1.42
CNN2-210ENST00000569352 RIMBP3CA6NJZ7 1639 aa23.93■■□□□ 1.42
CNN2-210ENST00000569352 RIMBP3BA6NNM3 1639 aa23.93■■□□□ 1.42
CNN2-210ENST00000569352 RIMBP3Q9UFD9 1639 aa23.93■■□□□ 1.42
CNN2-210ENST00000569352 P3H3Q8IVL6 736 aa23.93■■□□□ 1.42
CNN2-210ENST00000569352 PTPRGP23470 1445 aa23.91■■□□□ 1.42
CNN2-210ENST00000569352 ARHGAP35Q9NRY4 1499 aa23.9■■□□□ 1.42
CNN2-210ENST00000569352 FHOD3Q2V2M9 1422 aa23.85■■□□□ 1.41
CNN2-210ENST00000569352 TTBK1Q5TCY1 1321 aaPredicted RBP23.84■■□□□ 1.41
CNN2-210ENST00000569352 ARAP1Q96P48 1450 aa23.82■■□□□ 1.4
CNN2-210ENST00000569352 CYB5RLQ6IPT4 315 aa23.82■■□□□ 1.4
CNN2-210ENST00000569352 FMN1Q68DA7 1419 aa23.8■■□□□ 1.4
CNN2-210ENST00000569352 UACAQ9BZF9 1416 aa23.74■■□□□ 1.39
CNN2-210ENST00000569352 UHRF1BP1LA0JNW5 1464 aa23.68■■□□□ 1.38
CNN2-210ENST00000569352 PLB1Q6P1J6 1458 aa23.68■■□□□ 1.38
CNN2-210ENST00000569352 ABCA8O94911 1581 aa23.68■■□□□ 1.38
CNN2-210ENST00000569352 ABCC2Q92887 1545 aa23.65■■□□□ 1.38
CNN2-210ENST00000569352 RAPGEF6Q8TEU7 1601 aa23.65■■□□□ 1.38
CNN2-210ENST00000569352 VPS8Q8N3P4 1428 aa23.65■■□□□ 1.38
CNN2-210ENST00000569352 NPM1P06748 294 aaKnown RBP eCLIP23.64■■□□□ 1.37
CNN2-210ENST00000569352 CASKIN1Q8WXD9 1431 aa23.64■■□□□ 1.37
CNN2-210ENST00000569352 ATP1B4Q9UN42 357 aaPredicted RBP23.63■■□□□ 1.37
CNN2-210ENST00000569352 ADCY10Q96PN6 1610 aa23.61■■□□□ 1.37
CNN2-210ENST00000569352 FYCO1Q9BQS8 1478 aa23.6■■□□□ 1.37
CNN2-210ENST00000569352 HECW1Q76N89 1606 aa23.58■■□□□ 1.36
CNN2-210ENST00000569352 NUP153P49790 1475 aaKnown RBP23.56■■□□□ 1.36
CNN2-210ENST00000569352 PCF11O94913 1555 aaKnown RBP23.56■■□□□ 1.36
CNN2-210ENST00000569352 KDM5BQ9UGL1 1544 aa23.55■■□□□ 1.36
CNN2-210ENST00000569352 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.53■■□□□ 1.36
CNN2-210ENST00000569352 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
CNN2-210ENST00000569352 ATP10BO94823 1461 aa23.51■■□□□ 1.35
CNN2-210ENST00000569352 ARID3CA6NKF2 412 aa23.51■■□□□ 1.35
CNN2-210ENST00000569352 CCDC18Q5T9S5 1454 aa23.5■■□□□ 1.35
CNN2-210ENST00000569352 EPRSP07814 1512 aaKnown RBP23.5■■□□□ 1.35
CNN2-210ENST00000569352 APLP2Q06481 763 aa23.49■■□□□ 1.35
CNN2-210ENST00000569352 CDK11AQ9UQ88 783 aaPredicted RBP23.49■■□□□ 1.35
CNN2-210ENST00000569352 ZCCHC11Q5TAX3 1644 aaKnown RBP23.46■■□□□ 1.35
CNN2-210ENST00000569352 PLEKHD1A6NEE1 506 aa23.45■■□□□ 1.34
CNN2-210ENST00000569352 CDK13Q14004 1512 aaKnown RBP23.42■■□□□ 1.34
CNN2-210ENST00000569352 MAPKBP1O60336 1514 aa23.41■■□□□ 1.34
CNN2-210ENST00000569352 MAP3K1Q13233 1512 aa23.4■■□□□ 1.34
CNN2-210ENST00000569352 ASXL2Q76L83 1435 aa23.4■■□□□ 1.34
CNN2-210ENST00000569352 LRRIQ1Q96JM4 1722 aa23.39■■□□□ 1.33
CNN2-210ENST00000569352 WDR7Q9Y4E6 1490 aa23.35■■□□□ 1.33
CNN2-210ENST00000569352 TIAM1Q13009 1591 aa23.35■■□□□ 1.33
CNN2-210ENST00000569352 MTUS2Q5JR59 1369 aa23.32■■□□□ 1.32
CNN2-210ENST00000569352 TROQ12816 1431 aaPredicted RBP23.32■■□□□ 1.32
CNN2-210ENST00000569352 CFAP43Q8NDM7 1665 aa23.32■■□□□ 1.32
CNN2-210ENST00000569352 KCNH8Q96L42 1107 aa23.31■■□□□ 1.32
CNN2-210ENST00000569352 LRRC9Q6ZRR7 1453 aa23.26■■□□□ 1.31
CNN2-210ENST00000569352 ABCC10Q5T3U5 1492 aa23.25■■□□□ 1.31
CNN2-210ENST00000569352 EHBP1L1Q8N3D4 1523 aa23.24■■□□□ 1.31
CNN2-210ENST00000569352 KANK4Q5T7N3 995 aaPredicted RBP23.24■■□□□ 1.31
CNN2-210ENST00000569352 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
CNN2-210ENST00000569352 FAM69CQ0P6D2 419 aa23.23■■□□□ 1.31
CNN2-210ENST00000569352 TRHP20396 242 aaPredicted RBP23.2■■□□□ 1.3
CNN2-210ENST00000569352 KIF14Q15058 1648 aa23.19■■□□□ 1.3
CNN2-210ENST00000569352 GLI2P10070 1586 aa23.19■■□□□ 1.3
CNN2-210ENST00000569352 DIP2BQ9P265 1576 aa23.18■■□□□ 1.3
CNN2-210ENST00000569352 SUPT6HQ7KZ85 1726 aaKnown RBP23.15■■□□□ 1.3
CNN2-210ENST00000569352 ABCA9Q8IUA7 1624 aa23.13■■□□□ 1.29
CNN2-210ENST00000569352 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.13■■□□□ 1.292e-6■□□□□ 8.3
CNN2-210ENST00000569352 CD109Q6YHK3 1445 aa23.11■■□□□ 1.29
CNN2-210ENST00000569352 KIF13AQ9H1H9 1805 aa23.11■■□□□ 1.29
CNN2-210ENST00000569352 CCNB3Q8WWL7 1395 aa23.11■■□□□ 1.29
CNN2-210ENST00000569352 NCOA2Q15596 1464 aa23.11■■□□□ 1.29
CNN2-210ENST00000569352 PPARGC1BQ86YN6 1023 aaKnown RBP23.09■■□□□ 1.29
CNN2-210ENST00000569352 TTC37Q6PGP7 1564 aa23.07■■□□□ 1.28
CNN2-210ENST00000569352 MAP3K4Q9Y6R4 1608 aa23.06■■□□□ 1.28
CNN2-210ENST00000569352 PLCH2O75038 1416 aa23.06■■□□□ 1.28
CNN2-210ENST00000569352 EFCAB2Q5VUJ9 269 aa23.03■■□□□ 1.28
CNN2-210ENST00000569352 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
CNN2-210ENST00000569352 GPATCH8Q9UKJ3 1502 aaKnown RBP23.03■■□□□ 1.28
CNN2-210ENST00000569352 MYO5CQ9NQX4 1742 aa23.02■■□□□ 1.28
CNN2-210ENST00000569352 CFDP1Q9UEE9 299 aaPredicted RBP23.02■■□□□ 1.28
CNN2-210ENST00000569352 TEX14Q8IWB6 1497 aa23.01■■□□□ 1.27
CNN2-210ENST00000569352 MYOM3Q5VTT5 1437 aa22.99■■□□□ 1.27
CNN2-210ENST00000569352 ITSN2Q9NZM3 1697 aa22.99■■□□□ 1.27
CNN2-210ENST00000569352 CDC42BPAQ5VT25 1732 aa22.98■■□□□ 1.27
CNN2-210ENST00000569352 PHLDB1Q86UU1 1377 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms