RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 PRG4Q92954 1404 aaPredicted RBP30.99■■■□□ 2.55
SIN3A-212ENST00000568919 TRHP20396 242 aaPredicted RBP30.96■■■□□ 2.55
SIN3A-212ENST00000568919 RUSC2Q8N2Y8 1516 aa30.96■■■□□ 2.55
SIN3A-212ENST00000568919 KIAA0586Q9BVV6 1533 aa30.93■■■□□ 2.54
SIN3A-212ENST00000568919 RAPGEF2Q9Y4G8 1499 aa30.78■■■□□ 2.52
SIN3A-212ENST00000568919 IQGAP2Q13576 1575 aa30.66■■■□□ 2.5
SIN3A-212ENST00000568919 CARMIL2Q6F5E8 1435 aa30.61■■■□□ 2.49
SIN3A-212ENST00000568919 PTPRGP23470 1445 aa30.59■■■□□ 2.49
SIN3A-212ENST00000568919 PRXQ9BXM0 1461 aa30.58■■■□□ 2.49
SIN3A-212ENST00000568919 TTBK1Q5TCY1 1321 aaPredicted RBP30.57■■■□□ 2.48
SIN3A-212ENST00000568919 NPM1P06748 294 aaKnown RBP eCLIP30.57■■■□□ 2.48
SIN3A-212ENST00000568919 TNIKQ9UKE5 1360 aa30.56■■■□□ 2.48
SIN3A-212ENST00000568919 CSRNP3Q8WYN3 585 aa30.55■■■□□ 2.48
SIN3A-212ENST00000568919 ADCY10Q96PN6 1610 aa30.52■■■□□ 2.48
SIN3A-212ENST00000568919 DISP1Q96F81 1524 aa30.52■■■□□ 2.48
SIN3A-212ENST00000568919 UGGT2Q9NYU1 1516 aa30.5■■■□□ 2.47
SIN3A-212ENST00000568919 CTTNBP2Q8WZ74 1663 aa30.43■■■□□ 2.46
SIN3A-212ENST00000568919 CHIC1Q5VXU3 224 aa30.42■■■□□ 2.46
SIN3A-212ENST00000568919 EEA1Q15075 1411 aa30.41■■■□□ 2.46
SIN3A-212ENST00000568919 MAPKBP1O60336 1514 aa30.38■■■□□ 2.45
SIN3A-212ENST00000568919 FAM9AQ8IZU1 332 aaPredicted RBP30.38■■■□□ 2.45
SIN3A-212ENST00000568919 KIAA0556O60303 1618 aa30.36■■■□□ 2.45
SIN3A-212ENST00000568919 FAM69CQ0P6D2 419 aa30.36■■■□□ 2.45
SIN3A-212ENST00000568919 UACAQ9BZF9 1416 aa30.36■■■□□ 2.45
SIN3A-212ENST00000568919 KIF13AQ9H1H9 1805 aa30.36■■■□□ 2.45
SIN3A-212ENST00000568919 ABCC10Q5T3U5 1492 aa30.33■■■□□ 2.45
SIN3A-212ENST00000568919 UHRF1BP1LA0JNW5 1464 aa30.32■■■□□ 2.44
SIN3A-212ENST00000568919 ABCC2Q92887 1545 aa30.31■■■□□ 2.44
SIN3A-212ENST00000568919 GOLGA3Q08378 1498 aa30.31■■■□□ 2.44
SIN3A-212ENST00000568919 DIP2BQ9P265 1576 aa30.23■■■□□ 2.43
SIN3A-212ENST00000568919 P3H3Q8IVL6 736 aa30.19■■■□□ 2.42
SIN3A-212ENST00000568919 ASXL2Q76L83 1435 aa30.19■■■□□ 2.42
SIN3A-212ENST00000568919 KDM5BQ9UGL1 1544 aa30.18■■■□□ 2.42
SIN3A-212ENST00000568919 PLB1Q6P1J6 1458 aa30.16■■■□□ 2.42
SIN3A-212ENST00000568919 KIF21BO75037 1637 aa30.1■■■□□ 2.41
SIN3A-212ENST00000568919 ABCA8O94911 1581 aa30.09■■■□□ 2.41
SIN3A-212ENST00000568919 RANGAP1P46060 587 aaPredicted RBP30.09■■■□□ 2.41
SIN3A-212ENST00000568919 ZCCHC11Q5TAX3 1644 aaKnown RBP30.09■■■□□ 2.41
SIN3A-212ENST00000568919 SAMD9Q5K651 1589 aa30.05■■■□□ 2.4
SIN3A-212ENST00000568919 TSPOAP1O95153 1857 aa30.04■■■□□ 2.4
SIN3A-212ENST00000568919 EHMT2Q96KQ7 1210 aa30.03■■■□□ 2.4
SIN3A-212ENST00000568919 GLI2P10070 1586 aa30.02■■■□□ 2.4
SIN3A-212ENST00000568919 EPRSP07814 1512 aaKnown RBP29.99■■■□□ 2.39
SIN3A-212ENST00000568919 UBTFP17480 764 aaKnown RBP29.98■■■□□ 2.39
SIN3A-212ENST00000568919 WDR7Q9Y4E6 1490 aa29.93■■■□□ 2.38
SIN3A-212ENST00000568919 ARID3CA6NKF2 412 aa29.93■■■□□ 2.38
SIN3A-212ENST00000568919 KCNH8Q96L42 1107 aa29.91■■■□□ 2.38
SIN3A-212ENST00000568919 FHOD3Q2V2M9 1422 aa29.9■■■□□ 2.38
SIN3A-212ENST00000568919 ATP10BO94823 1461 aa29.89■■■□□ 2.38
SIN3A-212ENST00000568919 PPRC1Q5VV67 1664 aaKnown RBP29.87■■■□□ 2.37
SIN3A-212ENST00000568919 MAP3K4Q9Y6R4 1608 aa29.85■■■□□ 2.37
SIN3A-212ENST00000568919 RAPGEF6Q8TEU7 1601 aa29.85■■■□□ 2.37
SIN3A-212ENST00000568919 KDM6BO15054 1643 aa29.84■■■□□ 2.37
SIN3A-212ENST00000568919 EFCAB5A4FU69 1503 aa29.83■■■□□ 2.37
SIN3A-212ENST00000568919 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.78■■■□□ 2.36
SIN3A-212ENST00000568919 HNRNPUL2Q1KMD3 747 aaKnown RBP29.78■■■□□ 2.36
SIN3A-212ENST00000568919 NUP153P49790 1475 aaKnown RBP29.76■■■□□ 2.35
SIN3A-212ENST00000568919 CD109Q6YHK3 1445 aa29.76■■■□□ 2.35
SIN3A-212ENST00000568919 TEX14Q8IWB6 1497 aa29.74■■■□□ 2.35
SIN3A-212ENST00000568919 CFAP43Q8NDM7 1665 aa29.69■■■□□ 2.34
SIN3A-212ENST00000568919 ARHGAP35Q9NRY4 1499 aa29.69■■■□□ 2.34
SIN3A-212ENST00000568919 COL17A1Q9UMD9 1497 aaPredicted RBP29.69■■■□□ 2.34
SIN3A-212ENST00000568919 MAGI3Q5TCQ9 1506 aa29.68■■■□□ 2.34
SIN3A-212ENST00000568919 AEBP2Q6ZN18 517 aaPredicted RBP29.66■■■□□ 2.34
SIN3A-212ENST00000568919 PLEKHD1A6NEE1 506 aa29.65■■■□□ 2.34
SIN3A-212ENST00000568919 FMN1Q68DA7 1419 aa29.61■■■□□ 2.33
SIN3A-212ENST00000568919 ATP1B4Q9UN42 357 aaPredicted RBP29.59■■■□□ 2.33
SIN3A-212ENST00000568919 ABCA9Q8IUA7 1624 aa29.57■■■□□ 2.32
SIN3A-212ENST00000568919 CDK13Q14004 1512 aaKnown RBP29.5■■■□□ 2.31
SIN3A-212ENST00000568919 KDM4FA0A1W2PPD8 638 aa29.46■■■□□ 2.31
SIN3A-212ENST00000568919 HECW1Q76N89 1606 aa29.45■■■□□ 2.31
SIN3A-212ENST00000568919 PHLDB1Q86UU1 1377 aa29.45■■■□□ 2.31
SIN3A-212ENST00000568919 ARAP3Q8WWN8 1544 aa29.44■■■□□ 2.3
SIN3A-212ENST00000568919 CDK11AQ9UQ88 783 aaPredicted RBP29.42■■■□□ 2.3
SIN3A-212ENST00000568919 CLIP1P30622 1438 aa29.4■■■□□ 2.3
SIN3A-212ENST00000568919 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.4■■■□□ 2.38e-8■■■□□ 18.8
SIN3A-212ENST00000568919 NEO1Q92859 1461 aa29.39■■■□□ 2.3
SIN3A-212ENST00000568919 RAPGEF3O95398 923 aa29.35■■■□□ 2.29
SIN3A-212ENST00000568919 CASKIN1Q8WXD9 1431 aa29.35■■■□□ 2.29
SIN3A-212ENST00000568919 LRRIQ1Q96JM4 1722 aa29.32■■■□□ 2.28
SIN3A-212ENST00000568919 TTC37Q6PGP7 1564 aa29.32■■■□□ 2.28
SIN3A-212ENST00000568919 AKNAQ7Z591 1439 aa29.28■■■□□ 2.28
SIN3A-212ENST00000568919 PCF11O94913 1555 aaKnown RBP29.28■■■□□ 2.28
SIN3A-212ENST00000568919 FANCAO15360 1455 aa29.28■■■□□ 2.28
SIN3A-212ENST00000568919 TROQ12816 1431 aaPredicted RBP29.28■■■□□ 2.28
SIN3A-212ENST00000568919 PLCH2O75038 1416 aa29.26■■■□□ 2.27
SIN3A-212ENST00000568919 ADGRL1O94910 1474 aa29.24■■■□□ 2.27
SIN3A-212ENST00000568919 CCDC18Q5T9S5 1454 aa29.23■■■□□ 2.27
SIN3A-212ENST00000568919 LOC105371045A0A1W2PR82 267 aa29.22■■■□□ 2.27
SIN3A-212ENST00000568919 FYCO1Q9BQS8 1478 aa29.22■■■□□ 2.27
SIN3A-212ENST00000568919 DENND4BO75064 1496 aaPredicted RBP29.21■■■□□ 2.27
SIN3A-212ENST00000568919 KIF14Q15058 1648 aa29.2■■■□□ 2.27
SIN3A-212ENST00000568919 CFAP74Q9C0B2 1584 aa29.2■■■□□ 2.26
SIN3A-212ENST00000568919 EFCAB2Q5VUJ9 269 aa29.19■■■□□ 2.26
SIN3A-212ENST00000568919 FRMPD1Q5SYB0 1578 aa29.18■■■□□ 2.26
SIN3A-212ENST00000568919 CEP162Q5TB80 1403 aa29.17■■■□□ 2.26
SIN3A-212ENST00000568919 MYO5CQ9NQX4 1742 aa29.14■■■□□ 2.25
SIN3A-212ENST00000568919 SCAPERQ9BY12 1400 aa29.12■■■□□ 2.25
SIN3A-212ENST00000568919 RICTORQ6R327 1708 aa29.12■■■□□ 2.25
SIN3A-212ENST00000568919 ARHGAP5Q13017 1502 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms