RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 RUSC2Q8N2Y8 1516 aa27.06■■□□□ 1.92
PKD1-236ENST00000568796 FAM69CQ0P6D2 419 aa27■■□□□ 1.91
PKD1-236ENST00000568796 KIF13AQ9H1H9 1805 aa27■■□□□ 1.91
PKD1-236ENST00000568796 KIF27Q86VH2 1401 aa26.99■■□□□ 1.91
PKD1-236ENST00000568796 IGF1RP08069 1367 aa26.98■■□□□ 1.91
PKD1-236ENST00000568796 KIAA0586Q9BVV6 1533 aa26.95■■□□□ 1.9
PKD1-236ENST00000568796 ABCC10Q5T3U5 1492 aa26.91■■□□□ 1.9
PKD1-236ENST00000568796 CUL7Q14999 1698 aa26.89■■□□□ 1.89
PKD1-236ENST00000568796 ADCY10Q96PN6 1610 aa26.88■■□□□ 1.89
PKD1-236ENST00000568796 TTBK1Q5TCY1 1321 aaPredicted RBP26.88■■□□□ 1.89
PKD1-236ENST00000568796 MAPKBP1O60336 1514 aa26.86■■□□□ 1.89
PKD1-236ENST00000568796 CARMIL1Q5VZK9 1371 aa26.83■■□□□ 1.88
PKD1-236ENST00000568796 DIP2BQ9P265 1576 aa26.8■■□□□ 1.88
PKD1-236ENST00000568796 PTPRGP23470 1445 aa26.79■■□□□ 1.88
PKD1-236ENST00000568796 CARMIL2Q6F5E8 1435 aa26.73■■□□□ 1.87
PKD1-236ENST00000568796 TNIKQ9UKE5 1360 aa26.71■■□□□ 1.87
PKD1-236ENST00000568796 TSPOAP1O95153 1857 aa26.7■■□□□ 1.86
PKD1-236ENST00000568796 KDM6BO15054 1643 aa26.68■■□□□ 1.86
PKD1-236ENST00000568796 IQGAP2Q13576 1575 aa26.64■■□□□ 1.86
PKD1-236ENST00000568796 ABCC2Q92887 1545 aa26.62■■□□□ 1.85
PKD1-236ENST00000568796 ASXL2Q76L83 1435 aa26.58■■□□□ 1.85
PKD1-236ENST00000568796 UACAQ9BZF9 1416 aa26.56■■□□□ 1.84
PKD1-236ENST00000568796 PLB1Q6P1J6 1458 aa26.55■■□□□ 1.84
PKD1-236ENST00000568796 RAPGEF2Q9Y4G8 1499 aa26.54■■□□□ 1.84
PKD1-236ENST00000568796 KDM4FA0A1W2PPD8 638 aa26.53■■□□□ 1.84
PKD1-236ENST00000568796 DISP1Q96F81 1524 aa26.53■■□□□ 1.84
PKD1-236ENST00000568796 UHRF1BP1LA0JNW5 1464 aa26.52■■□□□ 1.84
PKD1-236ENST00000568796 GLI2P10070 1586 aa26.46■■□□□ 1.83
PKD1-236ENST00000568796 UGGT2Q9NYU1 1516 aa26.45■■□□□ 1.83
PKD1-236ENST00000568796 KDM5BQ9UGL1 1544 aa26.41■■□□□ 1.82
PKD1-236ENST00000568796 KIAA0556O60303 1618 aa26.4■■□□□ 1.82
PKD1-236ENST00000568796 PPRC1Q5VV67 1664 aaKnown RBP26.4■■□□□ 1.82
PKD1-236ENST00000568796 EPRSP07814 1512 aaKnown RBP26.39■■□□□ 1.82
PKD1-236ENST00000568796 ZCCHC11Q5TAX3 1644 aaKnown RBP26.36■■□□□ 1.81
PKD1-236ENST00000568796 TEX14Q8IWB6 1497 aa26.31■■□□□ 1.8
PKD1-236ENST00000568796 MAP3K4Q9Y6R4 1608 aa26.3■■□□□ 1.8
PKD1-236ENST00000568796 COL17A1Q9UMD9 1497 aaPredicted RBP26.3■■□□□ 1.8
PKD1-236ENST00000568796 GOLGA3Q08378 1498 aa26.27■■□□□ 1.8
PKD1-236ENST00000568796 WDR7Q9Y4E6 1490 aa26.27■■□□□ 1.8
PKD1-236ENST00000568796 CTTNBP2Q8WZ74 1663 aa26.26■■□□□ 1.79
PKD1-236ENST00000568796 ADGRL1O94910 1474 aa26.25■■□□□ 1.79
PKD1-236ENST00000568796 KCNH8Q96L42 1107 aa26.25■■□□□ 1.79
PKD1-236ENST00000568796 PRXQ9BXM0 1461 aa26.17■■□□□ 1.78
PKD1-236ENST00000568796 CD109Q6YHK3 1445 aa26.17■■□□□ 1.78
PKD1-236ENST00000568796 FAM9AQ8IZU1 332 aaPredicted RBP26.17■■□□□ 1.78
PKD1-236ENST00000568796 ABCA8O94911 1581 aa26.16■■□□□ 1.78
PKD1-236ENST00000568796 ARID3CA6NKF2 412 aa26.15■■□□□ 1.78
PKD1-236ENST00000568796 P3H3Q8IVL6 736 aa26.14■■□□□ 1.78
PKD1-236ENST00000568796 MAGI3Q5TCQ9 1506 aa26.09■■□□□ 1.77
PKD1-236ENST00000568796 CFAP43Q8NDM7 1665 aa26.09■■□□□ 1.77
PKD1-236ENST00000568796 CSRNP3Q8WYN3 585 aa26■■□□□ 1.75
PKD1-236ENST00000568796 ATP10BO94823 1461 aa25.99■■□□□ 1.75
PKD1-236ENST00000568796 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.98■■□□□ 1.75
PKD1-236ENST00000568796 HNRNPUL2Q1KMD3 747 aaKnown RBP25.98■■□□□ 1.75
PKD1-236ENST00000568796 ILDR1Q86SU0 546 aaPredicted RBP25.97■■□□□ 1.75
PKD1-236ENST00000568796 RANGAP1P46060 587 aaPredicted RBP25.96■■□□□ 1.75
PKD1-236ENST00000568796 HECW2Q9P2P5 1572 aa25.95■■□□□ 1.74
PKD1-236ENST00000568796 ARAP3Q8WWN8 1544 aa25.89■■□□□ 1.74
PKD1-236ENST00000568796 KIF21BO75037 1637 aa25.88■■□□□ 1.73
PKD1-236ENST00000568796 SAMD9Q5K651 1589 aa25.87■■□□□ 1.73
PKD1-236ENST00000568796 RAPGEF6Q8TEU7 1601 aa25.86■■□□□ 1.73
PKD1-236ENST00000568796 ABCA9Q8IUA7 1624 aa25.85■■□□□ 1.73
PKD1-236ENST00000568796 PHLDB1Q86UU1 1377 aa25.84■■□□□ 1.73
PKD1-236ENST00000568796 RAPGEF3O95398 923 aa25.84■■□□□ 1.73
PKD1-236ENST00000568796 FHOD3Q2V2M9 1422 aa25.8■■□□□ 1.72
PKD1-236ENST00000568796 EEA1Q15075 1411 aa25.79■■□□□ 1.72
PKD1-236ENST00000568796 NUP153P49790 1475 aaKnown RBP25.77■■□□□ 1.72
PKD1-236ENST00000568796 NEO1Q92859 1461 aa25.77■■□□□ 1.72
PKD1-236ENST00000568796 ARID4BQ4LE39 1312 aaPredicted RBP25.75■■□□□ 1.71
PKD1-236ENST00000568796 PLEKHD1A6NEE1 506 aa25.75■■□□□ 1.71
PKD1-236ENST00000568796 PTPRMP28827 1452 aa25.67■■□□□ 1.7
PKD1-236ENST00000568796 FRMPD1Q5SYB0 1578 aa25.65■■□□□ 1.7
PKD1-236ENST00000568796 ADAMTSL3P82987 1691 aa25.64■■□□□ 1.7
PKD1-236ENST00000568796 EHMT2Q96KQ7 1210 aa25.64■■□□□ 1.7
PKD1-236ENST00000568796 DENND4BO75064 1496 aaPredicted RBP25.63■■□□□ 1.69
PKD1-236ENST00000568796 AKNAQ7Z591 1439 aa25.62■■□□□ 1.69
PKD1-236ENST00000568796 EFCAB5A4FU69 1503 aa25.61■■□□□ 1.69
PKD1-236ENST00000568796 FANCAO15360 1455 aa25.6■■□□□ 1.69
PKD1-236ENST00000568796 ATP1B4Q9UN42 357 aaPredicted RBP25.59■■□□□ 1.69
PKD1-236ENST00000568796 BCORL1Q5H9F3 1711 aa25.59■■□□□ 1.69
PKD1-236ENST00000568796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.58■■□□□ 1.68
PKD1-236ENST00000568796 UBTFP17480 764 aaKnown RBP25.57■■□□□ 1.68
PKD1-236ENST00000568796 MADDQ8WXG6 1647 aa25.56■■□□□ 1.68
PKD1-236ENST00000568796 ARHGEF40Q8TER5 1519 aa25.55■■□□□ 1.68
PKD1-236ENST00000568796 PLPPR3Q6T4P5 718 aa25.55■■□□□ 1.68
PKD1-236ENST00000568796 CFAP74Q9C0B2 1584 aa25.55■■□□□ 1.68
PKD1-236ENST00000568796 CDK13Q14004 1512 aaKnown RBP25.53■■□□□ 1.68
PKD1-236ENST00000568796 TTC37Q6PGP7 1564 aa25.53■■□□□ 1.68
PKD1-236ENST00000568796 RICTORQ6R327 1708 aa25.52■■□□□ 1.68
PKD1-236ENST00000568796 POGZQ7Z3K3 1410 aa25.48■■□□□ 1.67
PKD1-236ENST00000568796 RIMS1Q86UR5 1692 aaKnown RBP25.48■■□□□ 1.67
PKD1-236ENST00000568796 MLECQ14165 292 aa25.47■■□□□ 1.67
PKD1-236ENST00000568796 YEATS2Q9ULM3 1422 aa25.46■■□□□ 1.67
PKD1-236ENST00000568796 FBXO41Q8TF61 875 aa25.46■■□□□ 1.67
PKD1-236ENST00000568796 PCF11O94913 1555 aaKnown RBP25.46■■□□□ 1.67
PKD1-236ENST00000568796 ZFYVE16Q7Z3T8 1539 aa25.46■■□□□ 1.67
PKD1-236ENST00000568796 PLCH2O75038 1416 aa25.44■■□□□ 1.66
PKD1-236ENST00000568796 SCAPERQ9BY12 1400 aa25.44■■□□□ 1.66
PKD1-236ENST00000568796 ZMYM4Q5VZL5 1548 aa25.43■■□□□ 1.66
PKD1-236ENST00000568796 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms