RNA–Protein interactions for RNA: ENST00000568412.5

TCF25-222, Transcript of transcription factor 25, human

TSL 3

Gene TCF25, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF25-222	ENST00000568412	NPM1	P06748	294 aa	Known RBP eCLIP	29.71	■■■□□ 2.35
TCF25-222	ENST00000568412	FAM69C	Q0P6D2	419 aa		29.71	■■■□□ 2.35
TCF25-222	ENST00000568412	RUSC2	Q8N2Y8	1516 aa		29.7	■■■□□ 2.34
TCF25-222	ENST00000568412	ABCC10	Q5T3U5	1492 aa		29.68	■■■□□ 2.34
TCF25-222	ENST00000568412	MAPKBP1	O60336	1514 aa		29.62	■■■□□ 2.33
TCF25-222	ENST00000568412	IGF1R	P08069	1367 aa		29.58	■■■□□ 2.33
TCF25-222	ENST00000568412	KIAA0586	Q9BVV6	1533 aa		29.58	■■■□□ 2.33
TCF25-222	ENST00000568412	ADCY10	Q96PN6	1610 aa		29.57	■■■□□ 2.32
TCF25-222	ENST00000568412	DIP2B	Q9P265	1576 aa		29.54	■■■□□ 2.32
TCF25-222	ENST00000568412	KIF27	Q86VH2	1401 aa		29.49	■■■□□ 2.31
TCF25-222	ENST00000568412	CUL7	Q14999	1698 aa		29.43	■■■□□ 2.3
TCF25-222	ENST00000568412	PTPRG	P23470	1445 aa		29.4	■■■□□ 2.3
TCF25-222	ENST00000568412	KDM6B	O15054	1643 aa		29.39	■■■□□ 2.3
TCF25-222	ENST00000568412	KDM4F	A0A1W2PPD8	638 aa		29.37	■■■□□ 2.29
TCF25-222	ENST00000568412	CARMIL1	Q5VZK9	1371 aa		29.35	■■■□□ 2.29
TCF25-222	ENST00000568412	TTBK1	Q5TCY1	1321 aa	Predicted RBP	29.33	■■■□□ 2.29
TCF25-222	ENST00000568412	TSPOAP1	O95153	1857 aa		29.32	■■■□□ 2.28
TCF25-222	ENST00000568412	TNIK	Q9UKE5	1360 aa		29.3	■■■□□ 2.28
TCF25-222	ENST00000568412	CARMIL2	Q6F5E8	1435 aa		29.29	■■■□□ 2.28
TCF25-222	ENST00000568412	ABCC2	Q92887	1545 aa		29.27	■■■□□ 2.28
TCF25-222	ENST00000568412	ASXL2	Q76L83	1435 aa		29.22	■■■□□ 2.27
TCF25-222	ENST00000568412	PLB1	Q6P1J6	1458 aa		29.21	■■■□□ 2.27
TCF25-222	ENST00000568412	IQGAP2	Q13576	1575 aa		29.18	■■■□□ 2.26
TCF25-222	ENST00000568412	UHRF1BP1L	A0JNW5	1464 aa		29.17	■■■□□ 2.26
TCF25-222	ENST00000568412	GLI2	P10070	1586 aa		29.16	■■■□□ 2.26
TCF25-222	ENST00000568412	UACA	Q9BZF9	1416 aa		29.14	■■■□□ 2.26
TCF25-222	ENST00000568412	DISP1	Q96F81	1524 aa		29.12	■■■□□ 2.25
TCF25-222	ENST00000568412	PPRC1	Q5VV67	1664 aa	Known RBP	29.09	■■■□□ 2.25
TCF25-222	ENST00000568412	KDM5B	Q9UGL1	1544 aa		29.04	■■■□□ 2.24
TCF25-222	ENST00000568412	EPRS	P07814	1512 aa	Known RBP	29.04	■■■□□ 2.24
TCF25-222	ENST00000568412	COL17A1	Q9UMD9	1497 aa	Predicted RBP	29.02	■■■□□ 2.24
TCF25-222	ENST00000568412	UGGT2	Q9NYU1	1516 aa		29.01	■■■□□ 2.23
TCF25-222	ENST00000568412	RAPGEF2	Q9Y4G8	1499 aa		29.01	■■■□□ 2.23
TCF25-222	ENST00000568412	ADGRL1	O94910	1474 aa		28.98	■■■□□ 2.23
TCF25-222	ENST00000568412	MAP3K4	Q9Y6R4	1608 aa		28.95	■■■□□ 2.23
TCF25-222	ENST00000568412	TEX14	Q8IWB6	1497 aa		28.94	■■■□□ 2.22
TCF25-222	ENST00000568412	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.93	■■■□□ 2.22
TCF25-222	ENST00000568412	KIAA0556	O60303	1618 aa		28.92	■■■□□ 2.22
TCF25-222	ENST00000568412	ILDR1	Q86SU0	546 aa	Predicted RBP	28.88	■■■□□ 2.21
TCF25-222	ENST00000568412	WDR7	Q9Y4E6	1490 aa		28.85	■■■□□ 2.21
TCF25-222	ENST00000568412	GOLGA3	Q08378	1498 aa		28.75	■■■□□ 2.19
TCF25-222	ENST00000568412	KCNH8	Q96L42	1107 aa		28.75	■■■□□ 2.19
TCF25-222	ENST00000568412	CD109	Q6YHK3	1445 aa		28.75	■■■□□ 2.19
TCF25-222	ENST00000568412	MAGI3	Q5TCQ9	1506 aa		28.73	■■■□□ 2.19
TCF25-222	ENST00000568412	ABCA8	O94911	1581 aa		28.71	■■■□□ 2.19
TCF25-222	ENST00000568412	CTTNBP2	Q8WZ74	1663 aa		28.7	■■■□□ 2.18
TCF25-222	ENST00000568412	HECW2	Q9P2P5	1572 aa		28.69	■■■□□ 2.18
TCF25-222	ENST00000568412	CFAP43	Q8NDM7	1665 aa		28.66	■■■□□ 2.18
TCF25-222	ENST00000568412	PRX	Q9BXM0	1461 aa		28.62	■■■□□ 2.17
TCF25-222	ENST00000568412	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.54	■■■□□ 2.16
TCF25-222	ENST00000568412	ARID3C	A6NKF2	412 aa		28.53	■■■□□ 2.16
TCF25-222	ENST00000568412	ARAP3	Q8WWN8	1544 aa		28.53	■■■□□ 2.16
TCF25-222	ENST00000568412	P3H3	Q8IVL6	736 aa		28.51	■■■□□ 2.15
TCF25-222	ENST00000568412	ATP10B	O94823	1461 aa		28.51	■■■□□ 2.15
TCF25-222	ENST00000568412	KIF21B	O75037	1637 aa		28.47	■■■□□ 2.15
TCF25-222	ENST00000568412	PHLDB1	Q86UU1	1377 aa		28.44	■■■□□ 2.14
TCF25-222	ENST00000568412	ABCA9	Q8IUA7	1624 aa		28.4	■■■□□ 2.14
TCF25-222	ENST00000568412	RAPGEF3	O95398	923 aa		28.38	■■■□□ 2.13
TCF25-222	ENST00000568412	CSRNP3	Q8WYN3	585 aa		28.33	■■■□□ 2.13
TCF25-222	ENST00000568412	NEO1	Q92859	1461 aa		28.33	■■■□□ 2.13
TCF25-222	ENST00000568412	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.32	■■■□□ 2.12
TCF25-222	ENST00000568412	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.32	■■■□□ 2.12
TCF25-222	ENST00000568412	PTPRM	P28827	1452 aa		28.32	■■■□□ 2.12
TCF25-222	ENST00000568412	SAMD9	Q5K651	1589 aa		28.32	■■■□□ 2.12
TCF25-222	ENST00000568412	ADAMTSL3	P82987	1691 aa		28.29	■■■□□ 2.12
TCF25-222	ENST00000568412	RAPGEF6	Q8TEU7	1601 aa		28.29	■■■□□ 2.12
TCF25-222	ENST00000568412	NUP153	P49790	1475 aa	Known RBP	28.24	■■■□□ 2.11
TCF25-222	ENST00000568412	ARID4B	Q4LE39	1312 aa	Predicted RBP	28.23	■■■□□ 2.11
TCF25-222	ENST00000568412	FBXO41	Q8TF61	875 aa		28.23	■■■□□ 2.11
TCF25-222	ENST00000568412	FRMPD1	Q5SYB0	1578 aa		28.21	■■■□□ 2.11
TCF25-222	ENST00000568412	RANGAP1	P46060	587 aa	Predicted RBP	28.19	■■■□□ 2.1
TCF25-222	ENST00000568412	BCORL1	Q5H9F3	1711 aa		28.18	■■■□□ 2.1
TCF25-222	ENST00000568412	PLEKHD1	A6NEE1	506 aa		28.17	■■■□□ 2.1
TCF25-222	ENST00000568412	FHOD3	Q2V2M9	1422 aa		28.16	■■■□□ 2.1
TCF25-222	ENST00000568412	MADD	Q8WXG6	1647 aa		28.14	■■■□□ 2.09
TCF25-222	ENST00000568412	DENND4B	O75064	1496 aa	Predicted RBP	28.13	■■■□□ 2.09
TCF25-222	ENST00000568412	AKNA	Q7Z591	1439 aa		28.11	■■■□□ 2.09
TCF25-222	ENST00000568412	PCF11	O94913	1555 aa	Known RBP	28.1	■■■□□ 2.09
TCF25-222	ENST00000568412	EEA1	Q15075	1411 aa		28.09	■■■□□ 2.09
TCF25-222	ENST00000568412	LMTK3	Q96Q04	1460 aa		28.08	■■■□□ 2.09
TCF25-222	ENST00000568412	ARHGEF40	Q8TER5	1519 aa		28.08	■■■□□ 2.09
TCF25-222	ENST00000568412	FANCA	O15360	1455 aa		28.08	■■■□□ 2.09
TCF25-222	ENST00000568412	RICTOR	Q6R327	1708 aa		28.05	■■■□□ 2.08
TCF25-222	ENST00000568412	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28.04	■■■□□ 2.08	2e-8	■□□□□ 9.9
TCF25-222	ENST00000568412	RIMS1	Q86UR5	1692 aa	Known RBP	28	■■■□□ 2.07
TCF25-222	ENST00000568412	CFAP74	Q9C0B2	1584 aa		28	■■■□□ 2.07
TCF25-222	ENST00000568412	POGZ	Q7Z3K3	1410 aa		28	■■■□□ 2.07
TCF25-222	ENST00000568412	ZMYM4	Q5VZL5	1548 aa		27.97	■■■□□ 2.07
TCF25-222	ENST00000568412	YEATS2	Q9ULM3	1422 aa		27.97	■■■□□ 2.07
TCF25-222	ENST00000568412	TTC37	Q6PGP7	1564 aa		27.97	■■■□□ 2.07
TCF25-222	ENST00000568412	EFCAB5	A4FU69	1503 aa		27.97	■■■□□ 2.07
TCF25-222	ENST00000568412	HSPA2	P54652	639 aa		27.96	■■■□□ 2.07
TCF25-222	ENST00000568412	PLPPR3	Q6T4P5	718 aa		27.95	■■■□□ 2.06
TCF25-222	ENST00000568412	ZFYVE16	Q7Z3T8	1539 aa		27.95	■■■□□ 2.06
TCF25-222	ENST00000568412	MAGI2	Q86UL8	1455 aa		27.94	■■■□□ 2.06
TCF25-222	ENST00000568412	CDK13	Q14004	1512 aa	Known RBP	27.9	■■■□□ 2.06
TCF25-222	ENST00000568412	PLCH2	O75038	1416 aa		27.9	■■■□□ 2.06
TCF25-222	ENST00000568412	SCAPER	Q9BY12	1400 aa		27.9	■■■□□ 2.06
TCF25-222	ENST00000568412	MLEC	Q14165	292 aa		27.89	■■■□□ 2.06
TCF25-222	ENST00000568412	SIGLEC1	Q9BZZ2	1709 aa		27.89	■■■□□ 2.05

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms