RNA–Protein interactions for RNA: ENST00000568235.5

ACSM3-213, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 4

Gene ACSM3, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-213ENST00000568235 KIF27Q86VH2 1401 aa21.31■■□□□ 1
ACSM3-213ENST00000568235 CUL7Q14999 1698 aa21.27■■□□□ 1
ACSM3-213ENST00000568235 KIF13AQ9H1H9 1805 aa21.26■□□□□ 0.99
ACSM3-213ENST00000568235 KIAA0586Q9BVV6 1533 aa21.25■□□□□ 0.99
ACSM3-213ENST00000568235 AEBP2Q6ZN18 517 aaPredicted RBP21.22■□□□□ 0.99
ACSM3-213ENST00000568235 ADCY10Q96PN6 1610 aa21.2■□□□□ 0.98
ACSM3-213ENST00000568235 NPM1P06748 294 aaKnown RBP eCLIP21.18■□□□□ 0.98
ACSM3-213ENST00000568235 CARMIL1Q5VZK9 1371 aa21.18■□□□□ 0.98
ACSM3-213ENST00000568235 FAM69CQ0P6D2 419 aa21.16■□□□□ 0.98
ACSM3-213ENST00000568235 MAPKBP1O60336 1514 aa21.15■□□□□ 0.98
ACSM3-213ENST00000568235 ABCC10Q5T3U5 1492 aa21.15■□□□□ 0.98
ACSM3-213ENST00000568235 DIP2BQ9P265 1576 aa21.11■□□□□ 0.97
ACSM3-213ENST00000568235 TTBK1Q5TCY1 1321 aaPredicted RBP21.11■□□□□ 0.97
ACSM3-213ENST00000568235 PTPRGP23470 1445 aa21.08■□□□□ 0.97
ACSM3-213ENST00000568235 IQGAP2Q13576 1575 aa21.06■□□□□ 0.96
ACSM3-213ENST00000568235 CARMIL2Q6F5E8 1435 aa21.04■□□□□ 0.96
ACSM3-213ENST00000568235 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
ACSM3-213ENST00000568235 TSPOAP1O95153 1857 aa20.99■□□□□ 0.95
ACSM3-213ENST00000568235 ABCC2Q92887 1545 aa20.98■□□□□ 0.95
ACSM3-213ENST00000568235 RAPGEF2Q9Y4G8 1499 aa20.97■□□□□ 0.95
ACSM3-213ENST00000568235 DISP1Q96F81 1524 aa20.97■□□□□ 0.95
ACSM3-213ENST00000568235 KDM6BO15054 1643 aa20.95■□□□□ 0.94
ACSM3-213ENST00000568235 ASXL2Q76L83 1435 aa20.93■□□□□ 0.94
ACSM3-213ENST00000568235 UACAQ9BZF9 1416 aa20.92■□□□□ 0.94
ACSM3-213ENST00000568235 UHRF1BP1LA0JNW5 1464 aa20.91■□□□□ 0.94
ACSM3-213ENST00000568235 UGGT2Q9NYU1 1516 aa20.91■□□□□ 0.94
ACSM3-213ENST00000568235 PLB1Q6P1J6 1458 aa20.89■□□□□ 0.94
ACSM3-213ENST00000568235 KIAA0556O60303 1618 aa20.87■□□□□ 0.93
ACSM3-213ENST00000568235 GLI2P10070 1586 aa20.84■□□□□ 0.93
ACSM3-213ENST00000568235 KDM5BQ9UGL1 1544 aa20.83■□□□□ 0.92
ACSM3-213ENST00000568235 PPRC1Q5VV67 1664 aaKnown RBP20.83■□□□□ 0.92
ACSM3-213ENST00000568235 CTTNBP2Q8WZ74 1663 aa20.81■□□□□ 0.92
ACSM3-213ENST00000568235 ZCCHC11Q5TAX3 1644 aaKnown RBP20.81■□□□□ 0.92
ACSM3-213ENST00000568235 EPRSP07814 1512 aaKnown RBP20.79■□□□□ 0.92
ACSM3-213ENST00000568235 KDM4FA0A1W2PPD8 638 aa20.77■□□□□ 0.92
ACSM3-213ENST00000568235 PRXQ9BXM0 1461 aa20.75■□□□□ 0.91
ACSM3-213ENST00000568235 MAP3K4Q9Y6R4 1608 aa20.74■□□□□ 0.91
ACSM3-213ENST00000568235 GOLGA3Q08378 1498 aa20.73■□□□□ 0.91
ACSM3-213ENST00000568235 COL17A1Q9UMD9 1497 aaPredicted RBP20.7■□□□□ 0.9
ACSM3-213ENST00000568235 WDR7Q9Y4E6 1490 aa20.7■□□□□ 0.9
ACSM3-213ENST00000568235 ABCA8O94911 1581 aa20.68■□□□□ 0.9
ACSM3-213ENST00000568235 TEX14Q8IWB6 1497 aa20.68■□□□□ 0.9
ACSM3-213ENST00000568235 KCNH8Q96L42 1107 aa20.62■□□□□ 0.89
ACSM3-213ENST00000568235 P3H3Q8IVL6 736 aa20.61■□□□□ 0.89
ACSM3-213ENST00000568235 ADGRL1O94910 1474 aa20.6■□□□□ 0.89
ACSM3-213ENST00000568235 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
ACSM3-213ENST00000568235 CD109Q6YHK3 1445 aa20.58■□□□□ 0.88
ACSM3-213ENST00000568235 CFAP43Q8NDM7 1665 aa20.57■□□□□ 0.88
ACSM3-213ENST00000568235 CSRNP3Q8WYN3 585 aa20.56■□□□□ 0.88
ACSM3-213ENST00000568235 MAGI3Q5TCQ9 1506 aa20.55■□□□□ 0.88
ACSM3-213ENST00000568235 SAMD9Q5K651 1589 aa20.51■□□□□ 0.87
ACSM3-213ENST00000568235 ATP10BO94823 1461 aa20.51■□□□□ 0.87
ACSM3-213ENST00000568235 FAM9AQ8IZU1 332 aaPredicted RBP20.5■□□□□ 0.87
ACSM3-213ENST00000568235 RANGAP1P46060 587 aaPredicted RBP20.47■□□□□ 0.87
ACSM3-213ENST00000568235 RAPGEF6Q8TEU7 1601 aa20.45■□□□□ 0.87
ACSM3-213ENST00000568235 EEA1Q15075 1411 aa20.44■□□□□ 0.86
ACSM3-213ENST00000568235 ABCA9Q8IUA7 1624 aa20.42■□□□□ 0.86
ACSM3-213ENST00000568235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.41■□□□□ 0.86
ACSM3-213ENST00000568235 HNRNPUL2Q1KMD3 747 aaKnown RBP20.41■□□□□ 0.86
ACSM3-213ENST00000568235 FHOD3Q2V2M9 1422 aa20.41■□□□□ 0.86
ACSM3-213ENST00000568235 ARAP3Q8WWN8 1544 aa20.39■□□□□ 0.85
ACSM3-213ENST00000568235 NUP153P49790 1475 aaKnown RBP20.39■□□□□ 0.85
ACSM3-213ENST00000568235 KIF21BO75037 1637 aa20.38■□□□□ 0.85
ACSM3-213ENST00000568235 HECW2Q9P2P5 1572 aa20.34■□□□□ 0.85
ACSM3-213ENST00000568235 RAPGEF3O95398 923 aa20.31■□□□□ 0.84
ACSM3-213ENST00000568235 PHLDB1Q86UU1 1377 aa20.31■□□□□ 0.84
ACSM3-213ENST00000568235 NEO1Q92859 1461 aa20.3■□□□□ 0.84
ACSM3-213ENST00000568235 EFCAB5A4FU69 1503 aa20.28■□□□□ 0.84
ACSM3-213ENST00000568235 EHMT2Q96KQ7 1210 aa20.28■□□□□ 0.84
ACSM3-213ENST00000568235 FRMPD1Q5SYB0 1578 aa20.26■□□□□ 0.83
ACSM3-213ENST00000568235 PLEKHD1A6NEE1 506 aa20.26■□□□□ 0.83
ACSM3-213ENST00000568235 ILDR1Q86SU0 546 aaPredicted RBP20.21■□□□□ 0.83
ACSM3-213ENST00000568235 CDK13Q14004 1512 aaKnown RBP20.21■□□□□ 0.83
ACSM3-213ENST00000568235 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.21■□□□□ 0.83
ACSM3-213ENST00000568235 TTC37Q6PGP7 1564 aa20.2■□□□□ 0.82
ACSM3-213ENST00000568235 UBTFP17480 764 aaKnown RBP20.19■□□□□ 0.82
ACSM3-213ENST00000568235 ADAMTSL3P82987 1691 aa20.19■□□□□ 0.82
ACSM3-213ENST00000568235 FANCAO15360 1455 aa20.18■□□□□ 0.82
ACSM3-213ENST00000568235 AKNAQ7Z591 1439 aa20.18■□□□□ 0.82
ACSM3-213ENST00000568235 ARID4BQ4LE39 1312 aaPredicted RBP20.17■□□□□ 0.82
ACSM3-213ENST00000568235 DENND4BO75064 1496 aaPredicted RBP20.17■□□□□ 0.82
ACSM3-213ENST00000568235 PTPRMP28827 1452 aa20.16■□□□□ 0.82
ACSM3-213ENST00000568235 RICTORQ6R327 1708 aa20.16■□□□□ 0.82
ACSM3-213ENST00000568235 CHIC1Q5VXU3 224 aa20.15■□□□□ 0.82
ACSM3-213ENST00000568235 ARHGEF40Q8TER5 1519 aa20.15■□□□□ 0.82
ACSM3-213ENST00000568235 CFAP74Q9C0B2 1584 aa20.15■□□□□ 0.82
ACSM3-213ENST00000568235 BCORL1Q5H9F3 1711 aa20.14■□□□□ 0.81
ACSM3-213ENST00000568235 ATP1B4Q9UN42 357 aaPredicted RBP20.14■□□□□ 0.81
ACSM3-213ENST00000568235 MADDQ8WXG6 1647 aa20.13■□□□□ 0.81
ACSM3-213ENST00000568235 ARHGAP35Q9NRY4 1499 aa20.12■□□□□ 0.81
ACSM3-213ENST00000568235 HECW1Q76N89 1606 aa20.1■□□□□ 0.81
ACSM3-213ENST00000568235 FMN1Q68DA7 1419 aa20.1■□□□□ 0.81
ACSM3-213ENST00000568235 ZMYM4Q5VZL5 1548 aa20.07■□□□□ 0.8
ACSM3-213ENST00000568235 YEATS2Q9ULM3 1422 aa20.07■□□□□ 0.8
ACSM3-213ENST00000568235 PLCH2O75038 1416 aa20.06■□□□□ 0.8
ACSM3-213ENST00000568235 ZFYVE16Q7Z3T8 1539 aa20.06■□□□□ 0.8
ACSM3-213ENST00000568235 RIMS1Q86UR5 1692 aaKnown RBP20.05■□□□□ 0.8
ACSM3-213ENST00000568235 SCAPERQ9BY12 1400 aa20.04■□□□□ 0.8
ACSM3-213ENST00000568235 SIGLEC1Q9BZZ2 1709 aa20.04■□□□□ 0.8
ACSM3-213ENST00000568235 KIF14Q15058 1648 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms