RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
COMMD4-216ENST00000567023 CUL7Q14999 1698 aa24.7■■□□□ 1.54
COMMD4-216ENST00000567023 KIAA0586Q9BVV6 1533 aa24.65■■□□□ 1.54
COMMD4-216ENST00000567023 CARMIL1Q5VZK9 1371 aa24.63■■□□□ 1.53
COMMD4-216ENST00000567023 NPM1P06748 294 aaKnown RBP eCLIP24.42■■□□□ 1.5
COMMD4-216ENST00000567023 RAPGEF2Q9Y4G8 1499 aa24.41■■□□□ 1.5
COMMD4-216ENST00000567023 ADCY10Q96PN6 1610 aa24.4■■□□□ 1.5
COMMD4-216ENST00000567023 IQGAP2Q13576 1575 aa24.39■■□□□ 1.5
COMMD4-216ENST00000567023 CARMIL2Q6F5E8 1435 aa24.38■■□□□ 1.49
COMMD4-216ENST00000567023 PTPRGP23470 1445 aa24.37■■□□□ 1.49
COMMD4-216ENST00000567023 MAPKBP1O60336 1514 aa24.37■■□□□ 1.49
COMMD4-216ENST00000567023 KIF13AQ9H1H9 1805 aa24.35■■□□□ 1.49
COMMD4-216ENST00000567023 TNIKQ9UKE5 1360 aa24.35■■□□□ 1.49
COMMD4-216ENST00000567023 ABCC10Q5T3U5 1492 aa24.33■■□□□ 1.49
COMMD4-216ENST00000567023 DISP1Q96F81 1524 aa24.3■■□□□ 1.48
COMMD4-216ENST00000567023 FAM69CQ0P6D2 419 aa24.29■■□□□ 1.48
COMMD4-216ENST00000567023 UGGT2Q9NYU1 1516 aa24.29■■□□□ 1.48
COMMD4-216ENST00000567023 DIP2BQ9P265 1576 aa24.24■■□□□ 1.47
COMMD4-216ENST00000567023 UHRF1BP1LA0JNW5 1464 aa24.23■■□□□ 1.47
COMMD4-216ENST00000567023 PRXQ9BXM0 1461 aa24.23■■□□□ 1.47
COMMD4-216ENST00000567023 ABCC2Q92887 1545 aa24.22■■□□□ 1.47
COMMD4-216ENST00000567023 TTBK1Q5TCY1 1321 aaPredicted RBP24.22■■□□□ 1.47
COMMD4-216ENST00000567023 UACAQ9BZF9 1416 aa24.19■■□□□ 1.46
COMMD4-216ENST00000567023 KIAA0556O60303 1618 aa24.17■■□□□ 1.46
COMMD4-216ENST00000567023 CTTNBP2Q8WZ74 1663 aa24.15■■□□□ 1.46
COMMD4-216ENST00000567023 PLB1Q6P1J6 1458 aa24.12■■□□□ 1.45
COMMD4-216ENST00000567023 ASXL2Q76L83 1435 aa24.1■■□□□ 1.45
COMMD4-216ENST00000567023 KDM5BQ9UGL1 1544 aa24.1■■□□□ 1.45
COMMD4-216ENST00000567023 GOLGA3Q08378 1498 aa24.09■■□□□ 1.45
COMMD4-216ENST00000567023 CSRNP3Q8WYN3 585 aa24.09■■□□□ 1.45
COMMD4-216ENST00000567023 GLI2P10070 1586 aa24.05■■□□□ 1.44
COMMD4-216ENST00000567023 EEA1Q15075 1411 aa24.02■■□□□ 1.44
COMMD4-216ENST00000567023 TSPOAP1O95153 1857 aa24■■□□□ 1.43
COMMD4-216ENST00000567023 ZCCHC11Q5TAX3 1644 aaKnown RBP23.99■■□□□ 1.43
COMMD4-216ENST00000567023 AEBP2Q6ZN18 517 aaPredicted RBP23.98■■□□□ 1.43
COMMD4-216ENST00000567023 EPRSP07814 1512 aaKnown RBP23.97■■□□□ 1.43
COMMD4-216ENST00000567023 KDM6BO15054 1643 aa23.96■■□□□ 1.43
COMMD4-216ENST00000567023 ABCA8O94911 1581 aa23.96■■□□□ 1.43
COMMD4-216ENST00000567023 PPRC1Q5VV67 1664 aaKnown RBP23.92■■□□□ 1.42
COMMD4-216ENST00000567023 WDR7Q9Y4E6 1490 aa23.9■■□□□ 1.42
COMMD4-216ENST00000567023 MAP3K4Q9Y6R4 1608 aa23.89■■□□□ 1.42
COMMD4-216ENST00000567023 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
COMMD4-216ENST00000567023 SAMD9Q5K651 1589 aa23.86■■□□□ 1.41
COMMD4-216ENST00000567023 P3H3Q8IVL6 736 aa23.85■■□□□ 1.41
COMMD4-216ENST00000567023 TEX14Q8IWB6 1497 aa23.82■■□□□ 1.4
COMMD4-216ENST00000567023 ATP10BO94823 1461 aa23.78■■□□□ 1.4
COMMD4-216ENST00000567023 COL17A1Q9UMD9 1497 aaPredicted RBP23.78■■□□□ 1.4
COMMD4-216ENST00000567023 KIF21BO75037 1637 aa23.77■■□□□ 1.4
COMMD4-216ENST00000567023 CHIC1Q5VXU3 224 aa23.77■■□□□ 1.4
COMMD4-216ENST00000567023 KCNH8Q96L42 1107 aa23.76■■□□□ 1.39
COMMD4-216ENST00000567023 CD109Q6YHK3 1445 aa23.75■■□□□ 1.39
COMMD4-216ENST00000567023 MAGI3Q5TCQ9 1506 aa23.74■■□□□ 1.39
COMMD4-216ENST00000567023 CFAP43Q8NDM7 1665 aa23.73■■□□□ 1.39
COMMD4-216ENST00000567023 RAPGEF6Q8TEU7 1601 aa23.71■■□□□ 1.39
COMMD4-216ENST00000567023 KDM4FA0A1W2PPD8 638 aa23.71■■□□□ 1.39
COMMD4-216ENST00000567023 ARID3CA6NKF2 412 aa23.68■■□□□ 1.38
COMMD4-216ENST00000567023 FHOD3Q2V2M9 1422 aa23.67■■□□□ 1.38
COMMD4-216ENST00000567023 RANGAP1P46060 587 aaPredicted RBP23.67■■□□□ 1.38
COMMD4-216ENST00000567023 EFCAB5A4FU69 1503 aa23.66■■□□□ 1.38
COMMD4-216ENST00000567023 NUP153P49790 1475 aaKnown RBP23.65■■□□□ 1.38
COMMD4-216ENST00000567023 ABCA9Q8IUA7 1624 aa23.6■■□□□ 1.37
COMMD4-216ENST00000567023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.58■■□□□ 1.37
COMMD4-216ENST00000567023 UBTFP17480 764 aaKnown RBP23.58■■□□□ 1.37
COMMD4-216ENST00000567023 HNRNPUL2Q1KMD3 747 aaKnown RBP23.58■■□□□ 1.37
COMMD4-216ENST00000567023 PHLDB1Q86UU1 1377 aa23.56■■□□□ 1.36
COMMD4-216ENST00000567023 ARAP3Q8WWN8 1544 aa23.56■■□□□ 1.36
COMMD4-216ENST00000567023 PLEKHD1A6NEE1 506 aa23.53■■□□□ 1.36
COMMD4-216ENST00000567023 ADGRL1O94910 1474 aa23.51■■□□□ 1.35
COMMD4-216ENST00000567023 EHMT2Q96KQ7 1210 aa23.49■■□□□ 1.35
COMMD4-216ENST00000567023 NEO1Q92859 1461 aa23.49■■□□□ 1.35
COMMD4-216ENST00000567023 ARHGAP35Q9NRY4 1499 aa23.48■■□□□ 1.35
COMMD4-216ENST00000567023 FMN1Q68DA7 1419 aa23.47■■□□□ 1.35
COMMD4-216ENST00000567023 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.4■■□□□ 1.34
COMMD4-216ENST00000567023 RAPGEF3O95398 923 aa23.39■■□□□ 1.33
COMMD4-216ENST00000567023 CDK13Q14004 1512 aaKnown RBP23.38■■□□□ 1.33
COMMD4-216ENST00000567023 HECW1Q76N89 1606 aa23.36■■□□□ 1.33
COMMD4-216ENST00000567023 FANCAO15360 1455 aa23.34■■□□□ 1.33
COMMD4-216ENST00000567023 AKNAQ7Z591 1439 aa23.33■■□□□ 1.33
COMMD4-216ENST00000567023 ATP1B4Q9UN42 357 aaPredicted RBP23.33■■□□□ 1.33
COMMD4-216ENST00000567023 CDK11AQ9UQ88 783 aaPredicted RBP23.33■■□□□ 1.33
COMMD4-216ENST00000567023 TTC37Q6PGP7 1564 aa23.32■■□□□ 1.32
COMMD4-216ENST00000567023 FRMPD1Q5SYB0 1578 aa23.31■■□□□ 1.32
COMMD4-216ENST00000567023 CFAP74Q9C0B2 1584 aa23.31■■□□□ 1.32
COMMD4-216ENST00000567023 DENND4BO75064 1496 aaPredicted RBP23.3■■□□□ 1.32
COMMD4-216ENST00000567023 PLCH2O75038 1416 aa23.29■■□□□ 1.32
COMMD4-216ENST00000567023 RICTORQ6R327 1708 aa23.25■■□□□ 1.31
COMMD4-216ENST00000567023 TROQ12816 1431 aaPredicted RBP23.24■■□□□ 1.31
COMMD4-216ENST00000567023 CASKIN1Q8WXD9 1431 aa23.23■■□□□ 1.31
COMMD4-216ENST00000567023 LRRIQ1Q96JM4 1722 aa23.21■■□□□ 1.31
COMMD4-216ENST00000567023 ZMYM4Q5VZL5 1548 aa23.19■■□□□ 1.3
COMMD4-216ENST00000567023 CLIP1P30622 1438 aa23.19■■□□□ 1.3
COMMD4-216ENST00000567023 EFCAB2Q5VUJ9 269 aa23.19■■□□□ 1.3
COMMD4-216ENST00000567023 KIF14Q15058 1648 aa23.19■■□□□ 1.3
COMMD4-216ENST00000567023 ADAMTSL3P82987 1691 aa23.18■■□□□ 1.3
COMMD4-216ENST00000567023 ARHGEF40Q8TER5 1519 aa23.18■■□□□ 1.3
COMMD4-216ENST00000567023 CCDC18Q5T9S5 1454 aa23.17■■□□□ 1.3
COMMD4-216ENST00000567023 MAGI2Q86UL8 1455 aa23.17■■□□□ 1.3
COMMD4-216ENST00000567023 SCAPERQ9BY12 1400 aa23.17■■□□□ 1.3
COMMD4-216ENST00000567023 MYO5CQ9NQX4 1742 aa23.17■■□□□ 1.3
COMMD4-216ENST00000567023 PCF11O94913 1555 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms