RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 DIEXFQ68CQ4 756 aaKnown RBP27.86■■■□□ 2.05
MSLN-207ENST00000566549 WDR97A6NE52 1622 aa27.84■■■□□ 2.05
MSLN-207ENST00000566549 FHAD1B1AJZ9 1412 aa27.83■■■□□ 2.05
MSLN-207ENST00000566549 GAPVD1Q14C86 1478 aa27.82■■■□□ 2.04
MSLN-207ENST00000566549 PCF11O94913 1555 aaKnown RBP27.79■■■□□ 2.04
MSLN-207ENST00000566549 ABCA5Q8WWZ7 1642 aa27.78■■■□□ 2.04
MSLN-207ENST00000566549 LRRC9Q6ZRR7 1453 aa27.78■■■□□ 2.04
MSLN-207ENST00000566549 ZNF316A6NFI3 1004 aaPredicted RBP27.76■■■□□ 2.03
MSLN-207ENST00000566549 MAP3K1Q13233 1512 aa27.75■■■□□ 2.03
MSLN-207ENST00000566549 DHX57Q6P158 1386 aaKnown RBP27.75■■■□□ 2.03
MSLN-207ENST00000566549 PHLDB1Q86UU1 1377 aa27.72■■■□□ 2.03
MSLN-207ENST00000566549 EFCAB5A4FU69 1503 aa27.72■■■□□ 2.03
MSLN-207ENST00000566549 CTTNBP2Q8WZ74 1663 aa27.71■■■□□ 2.03
MSLN-207ENST00000566549 TARBP1Q13395 1621 aaKnown RBP27.65■■■□□ 2.02
MSLN-207ENST00000566549 FAM50AQ14320 339 aaKnown RBP27.65■■■□□ 2.02
MSLN-207ENST00000566549 FYCO1Q9BQS8 1478 aa27.65■■■□□ 2.02
MSLN-207ENST00000566549 CASKIN1Q8WXD9 1431 aa27.64■■■□□ 2.01
MSLN-207ENST00000566549 CFAP43Q8NDM7 1665 aa27.63■■■□□ 2.01
MSLN-207ENST00000566549 AQRO60306 1485 aaKnown RBP eCLIP27.61■■■□□ 2.01
MSLN-207ENST00000566549 FMN1Q68DA7 1419 aa27.59■■■□□ 2.01
MSLN-207ENST00000566549 MRC2Q9UBG0 1479 aa27.59■■■□□ 2.01
MSLN-207ENST00000566549 CLSPNQ9HAW4 1339 aa27.57■■■□□ 2
MSLN-207ENST00000566549 RAB3GAP2Q9H2M9 1393 aa27.55■■■□□ 2
MSLN-207ENST00000566549 SNAPC4Q5SXM2 1469 aa27.53■■■□□ 2
MSLN-207ENST00000566549 SAMD9Q5K651 1589 aa27.51■■□□□ 1.99
MSLN-207ENST00000566549 PBRM1Q86U86 1689 aa27.47■■□□□ 1.99
MSLN-207ENST00000566549 MTUS2Q5JR59 1369 aa27.46■■□□□ 1.99
MSLN-207ENST00000566549 ZNF608Q9ULD9 1512 aaPredicted RBP27.44■■□□□ 1.98
MSLN-207ENST00000566549 SETD5Q9C0A6 1442 aa27.44■■□□□ 1.98
MSLN-207ENST00000566549 GRIN2BQ13224 1484 aa27.4■■□□□ 1.98
MSLN-207ENST00000566549 ADAMTS12P58397 1594 aa27.39■■□□□ 1.98
MSLN-207ENST00000566549 SCAF1Q9H7N4 1312 aaKnown RBP27.38■■□□□ 1.97
MSLN-207ENST00000566549 IFT140Q96RY7 1462 aa27.36■■□□□ 1.97
MSLN-207ENST00000566549 WDR62O43379 1518 aa27.34■■□□□ 1.97
MSLN-207ENST00000566549 FGD6Q6ZV73 1430 aa27.34■■□□□ 1.97
MSLN-207ENST00000566549 LRRIQ1Q96JM4 1722 aa27.34■■□□□ 1.97
MSLN-207ENST00000566549 ERCC6Q03468 1493 aa27.33■■□□□ 1.97
MSLN-207ENST00000566549 IQGAP2Q13576 1575 aa27.33■■□□□ 1.97
MSLN-207ENST00000566549 MIER1Q8N108 512 aa27.32■■□□□ 1.96
MSLN-207ENST00000566549 NEUROD1Q13562 356 aa27.32■■□□□ 1.96
MSLN-207ENST00000566549 MAPKBP1O60336 1514 aa27.32■■□□□ 1.96
MSLN-207ENST00000566549 ARID3CA6NKF2 412 aa27.31■■□□□ 1.96
MSLN-207ENST00000566549 ACIN1Q9UKV3 1341 aaKnown RBP27.29■■□□□ 1.96
MSLN-207ENST00000566549 NCOA2Q15596 1464 aa27.28■■□□□ 1.96
MSLN-207ENST00000566549 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.25■■□□□ 1.95
MSLN-207ENST00000566549 YTHDC1Q96MU7 727 aaKnown RBP27.24■■□□□ 1.95
MSLN-207ENST00000566549 THOC2Q8NI27 1593 aaKnown RBP27.24■■□□□ 1.95
MSLN-207ENST00000566549 SIN3AQ96ST3 1273 aa27.22■■□□□ 1.95
MSLN-207ENST00000566549 MAGI3Q5TCQ9 1506 aa27.21■■□□□ 1.95
MSLN-207ENST00000566549 CENPBP07199 599 aaPredicted RBP27.21■■□□□ 1.95
MSLN-207ENST00000566549 MYOM3Q5VTT5 1437 aa27.21■■□□□ 1.95
MSLN-207ENST00000566549 EHBP1L1Q8N3D4 1523 aa27.2■■□□□ 1.95
MSLN-207ENST00000566549 PTPRKQ15262 1439 aa27.19■■□□□ 1.94
MSLN-207ENST00000566549 EIF4G3O43432 1585 aaKnown RBP27.18■■□□□ 1.94
MSLN-207ENST00000566549 CCDC18Q5T9S5 1454 aa27.17■■□□□ 1.94
MSLN-207ENST00000566549 SUPT6HQ7KZ85 1726 aaKnown RBP27.17■■□□□ 1.94
MSLN-207ENST00000566549 HECW1Q76N89 1606 aa27.16■■□□□ 1.94
MSLN-207ENST00000566549 CDK13Q14004 1512 aaKnown RBP27.16■■□□□ 1.94
MSLN-207ENST00000566549 EPRSP07814 1512 aaKnown RBP27.14■■□□□ 1.94
MSLN-207ENST00000566549 UGGT2Q9NYU1 1516 aa27.13■■□□□ 1.93
MSLN-207ENST00000566549 FBLN2P98095 1184 aa27.12■■□□□ 1.93
MSLN-207ENST00000566549 GRIN2AQ12879 1464 aa27.12■■□□□ 1.93
MSLN-207ENST00000566549 KIAA0586Q9BVV6 1533 aa27.11■■□□□ 1.93
MSLN-207ENST00000566549 CHMP7Q8WUX9 453 aaPredicted RBP27.09■■□□□ 1.93
MSLN-207ENST00000566549 DISP1Q96F81 1524 aa27.07■■□□□ 1.92
MSLN-207ENST00000566549 HFM1A2PYH4 1435 aa27.06■■□□□ 1.92
MSLN-207ENST00000566549 ARHGEF11O15085 1522 aa27.06■■□□□ 1.92
MSLN-207ENST00000566549 PTPN23Q9H3S7 1636 aa27.06■■□□□ 1.92
MSLN-207ENST00000566549 CHIC2Q9UKJ5 165 aa27.06■■□□□ 1.92
MSLN-207ENST00000566549 KIAA0556O60303 1618 aa27.04■■□□□ 1.92
MSLN-207ENST00000566549 RRP7BPQ9NSQ0 103 aa27.01■■□□□ 1.92
MSLN-207ENST00000566549 NAIPQ13075 1403 aa27.01■■□□□ 1.91
MSLN-207ENST00000566549 MAGI1Q96QZ7 1491 aaPredicted RBP26.99■■□□□ 1.91
MSLN-207ENST00000566549 GTF3C3Q9Y5Q9 886 aa26.98■■□□□ 1.91
MSLN-207ENST00000566549 SYNJ2O15056 1496 aa26.96■■□□□ 1.91
MSLN-207ENST00000566549 UACAQ9BZF9 1416 aa26.95■■□□□ 1.9
MSLN-207ENST00000566549 CEP170Q5SW79 1584 aa26.94■■□□□ 1.9
MSLN-207ENST00000566549 NUP153P49790 1475 aaKnown RBP26.94■■□□□ 1.9
MSLN-207ENST00000566549 TCOF1Q13428 1488 aaKnown RBP26.93■■□□□ 1.9
MSLN-207ENST00000566549 RAPGEF6Q8TEU7 1601 aa26.88■■□□□ 1.89
MSLN-207ENST00000566549 MIA2Q96PC5 1412 aa26.87■■□□□ 1.89
MSLN-207ENST00000566549 TIMELESSQ9UNS1 1208 aa26.87■■□□□ 1.89
MSLN-207ENST00000566549 PPP1R15AO75807 674 aaPredicted RBP26.86■■□□□ 1.89
MSLN-207ENST00000566549 TONSLQ96HA7 1378 aa26.85■■□□□ 1.89
MSLN-207ENST00000566549 JPH4Q96JJ6 628 aa26.85■■□□□ 1.89
MSLN-207ENST00000566549 PLB1Q6P1J6 1458 aa26.85■■□□□ 1.89
MSLN-207ENST00000566549 TRIM52Q96A61 297 aa26.85■■□□□ 1.89
MSLN-207ENST00000566549 HIRIP3Q9BW71 556 aaPredicted RBP26.85■■□□□ 1.89
MSLN-207ENST00000566549 CDK11AQ9UQ88 783 aaPredicted RBP26.84■■□□□ 1.89
MSLN-207ENST00000566549 ZNF644Q9H582 1327 aaPredicted RBP26.83■■□□□ 1.89
MSLN-207ENST00000566549 PRG4Q92954 1404 aaPredicted RBP26.81■■□□□ 1.88
MSLN-207ENST00000566549 NUP160Q12769 1436 aa26.8■■□□□ 1.88
MSLN-207ENST00000566549 CARMIL2Q6F5E8 1435 aa26.78■■□□□ 1.88
MSLN-207ENST00000566549 KDM6BO15054 1643 aa26.77■■□□□ 1.88
MSLN-207ENST00000566549 DDX10Q13206 875 aaKnown RBP26.74■■□□□ 1.87
MSLN-207ENST00000566549 GCC2Q8IWJ2 1684 aa26.73■■□□□ 1.87
MSLN-207ENST00000566549 DAPK1P53355 1430 aa26.73■■□□□ 1.87
MSLN-207ENST00000566549 TROQ12816 1431 aaPredicted RBP26.72■■□□□ 1.87
MSLN-207ENST00000566549 AKNAQ7Z591 1439 aa26.72■■□□□ 1.87
MSLN-207ENST00000566549 ABCC5O15440 1437 aa26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms