RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 NISCHQ9Y2I1 1504 aa39.93■■■■□ 3.98
MSLN-207ENST00000566549 CCDC180Q9P1Z9 1646 aa34.09■■■■□ 3.05
MSLN-207ENST00000566549 SHROOM4Q9ULL8 1493 aa33.83■■■■□ 3.01
MSLN-207ENST00000566549 ZCCHC6Q5VYS8 1495 aaKnown RBP33.69■■■□□ 2.98
MSLN-207ENST00000566549 DCAF8L2P0C7V8 631 aa33.36■■■□□ 2.93
MSLN-207ENST00000566549 SUPT5HO00267 1087 aaKnown RBP32.96■■■□□ 2.87
MSLN-207ENST00000566549 DCAF1Q9Y4B6 1507 aa32.72■■■□□ 2.83
MSLN-207ENST00000566549 ABCC9O60706 1549 aa32.07■■■□□ 2.72
MSLN-207ENST00000566549 SCRIBQ14160 1630 aa31.98■■■□□ 2.71
MSLN-207ENST00000566549 MYO15BQ96JP2 1530 aa31.93■■■□□ 2.7
MSLN-207ENST00000566549 CHIC1Q5VXU3 224 aa31.78■■■□□ 2.68
MSLN-207ENST00000566549 NACADO15069 1562 aa31.66■■■□□ 2.66
MSLN-207ENST00000566549 RSF1Q96T23 1441 aaPredicted RBP31.45■■■□□ 2.62
MSLN-207ENST00000566549 RB1CC1Q8TDY2 1594 aa31.25■■■□□ 2.59
MSLN-207ENST00000566549 CECR2Q9BXF3 1484 aa31.21■■■□□ 2.59
MSLN-207ENST00000566549 MROH2BQ7Z745 1585 aa31.04■■■□□ 2.56
MSLN-207ENST00000566549 LOC105371045A0A1W2PR82 267 aa30.85■■■□□ 2.53
MSLN-207ENST00000566549 WIZO95785 1651 aa30.83■■■□□ 2.53
MSLN-207ENST00000566549 TRIM41Q8WV44 630 aa30.71■■■□□ 2.51
MSLN-207ENST00000566549 BAZ1AQ9NRL2 1556 aaPredicted RBP30.7■■■□□ 2.51
MSLN-207ENST00000566549 UNC13AQ9UPW8 1703 aa30.7■■■□□ 2.5
MSLN-207ENST00000566549 PABPN1Q86U42 306 aaKnown RBP eCLIP30.62■■■□□ 2.49
MSLN-207ENST00000566549 SMARCA4P51532 1647 aa30.49■■■□□ 2.47
MSLN-207ENST00000566549 FAM9AQ8IZU1 332 aaPredicted RBP30.49■■■□□ 2.47
MSLN-207ENST00000566549 BICRAQ9NZM4 1560 aa30.4■■■□□ 2.46
MSLN-207ENST00000566549 PCGF6Q9BYE7 350 aa30.38■■■□□ 2.45
MSLN-207ENST00000566549 TOP2AP11388 1531 aaKnown RBP30.34■■■□□ 2.45
MSLN-207ENST00000566549 EHMT2Q96KQ7 1210 aa30.29■■■□□ 2.44
MSLN-207ENST00000566549 CCDC88BA6NC98 1476 aa30.23■■■□□ 2.43
MSLN-207ENST00000566549 EIF4G1Q04637 1599 aaKnown RBP30.19■■■□□ 2.42
MSLN-207ENST00000566549 SMARCA2P51531 1590 aa30.16■■■□□ 2.42
MSLN-207ENST00000566549 ABCC8Q09428 1581 aa30.02■■■□□ 2.4
MSLN-207ENST00000566549 HRCP23327 699 aa30.02■■■□□ 2.4
MSLN-207ENST00000566549 PEG3Q9GZU2 1588 aa29.89■■■□□ 2.38
MSLN-207ENST00000566549 TRIM26Q12899 539 aaPredicted RBP29.86■■■□□ 2.37
MSLN-207ENST00000566549 ATAD2BQ9ULI0 1458 aa29.84■■■□□ 2.37
MSLN-207ENST00000566549 BAZ1BQ9UIG0 1483 aaKnown RBP29.75■■■□□ 2.35
MSLN-207ENST00000566549 SOGA1O94964 1423 aa29.67■■■□□ 2.34
MSLN-207ENST00000566549 WRNQ14191 1432 aaPredicted RBP eCLIP29.57■■■□□ 2.32
MSLN-207ENST00000566549 PPARGC1BQ86YN6 1023 aaKnown RBP29.54■■■□□ 2.32
MSLN-207ENST00000566549 RUSC2Q8N2Y8 1516 aa29.53■■■□□ 2.32
MSLN-207ENST00000566549 CSRNP3Q8WYN3 585 aa29.45■■■□□ 2.3
MSLN-207ENST00000566549 SYNJ1O43426 1573 aa29.42■■■□□ 2.3
MSLN-207ENST00000566549 EEA1Q15075 1411 aa29.38■■■□□ 2.29
MSLN-207ENST00000566549 UBTFP17480 764 aaKnown RBP29.34■■■□□ 2.29
MSLN-207ENST00000566549 NCAPD3P42695 1498 aa29.31■■■□□ 2.28
MSLN-207ENST00000566549 CEP162Q5TB80 1403 aa29.31■■■□□ 2.28
MSLN-207ENST00000566549 TNIKQ9UKE5 1360 aa29.27■■■□□ 2.28
MSLN-207ENST00000566549 HMGXB3Q12766 1538 aa29.26■■■□□ 2.28
MSLN-207ENST00000566549 GOLGA3Q08378 1498 aa29.2■■■□□ 2.26
MSLN-207ENST00000566549 TTBK1Q5TCY1 1321 aaPredicted RBP29.19■■■□□ 2.26
MSLN-207ENST00000566549 CEP164Q9UPV0 1460 aa29.08■■■□□ 2.25
MSLN-207ENST00000566549 TOP2BQ02880 1626 aa29.07■■■□□ 2.24
MSLN-207ENST00000566549 KIF21BO75037 1637 aa28.98■■■□□ 2.23
MSLN-207ENST00000566549 CFTRP13569 1480 aa28.97■■■□□ 2.23
MSLN-207ENST00000566549 ZEB1P37275 1124 aaPredicted RBP28.96■■■□□ 2.23
MSLN-207ENST00000566549 RAPGEF2Q9Y4G8 1499 aa28.96■■■□□ 2.23
MSLN-207ENST00000566549 BIVM-ERCC5R4GMW8 1640 aa28.95■■■□□ 2.22
MSLN-207ENST00000566549 RANGAP1P46060 587 aaPredicted RBP28.94■■■□□ 2.22
MSLN-207ENST00000566549 CUX1P39880 1505 aa28.92■■■□□ 2.22
MSLN-207ENST00000566549 CLIP1P30622 1438 aa28.87■■■□□ 2.21
MSLN-207ENST00000566549 CC2D2AQ9P2K1 1620 aa28.82■■■□□ 2.2
MSLN-207ENST00000566549 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.82■■■□□ 2.2
MSLN-207ENST00000566549 CADPSQ9ULU8 1353 aa28.76■■■□□ 2.19
MSLN-207ENST00000566549 CCER1Q8TC90 406 aaPredicted RBP28.71■■■□□ 2.19
MSLN-207ENST00000566549 KIF27Q86VH2 1401 aa28.7■■■□□ 2.18
MSLN-207ENST00000566549 PRXQ9BXM0 1461 aa28.69■■■□□ 2.18
MSLN-207ENST00000566549 VPS8Q8N3P4 1428 aa28.67■■■□□ 2.18
MSLN-207ENST00000566549 ERICH3Q5RHP9 1530 aa28.61■■■□□ 2.17
MSLN-207ENST00000566549 PRDM2Q13029 1718 aa28.6■■■□□ 2.17
MSLN-207ENST00000566549 APLP2Q06481 763 aa28.58■■■□□ 2.17
MSLN-207ENST00000566549 CUX2O14529 1486 aa28.54■■■□□ 2.16
MSLN-207ENST00000566549 FGD5Q6ZNL6 1462 aa28.49■■■□□ 2.15
MSLN-207ENST00000566549 FANCD2Q9BXW9 1451 aa28.48■■■□□ 2.15
MSLN-207ENST00000566549 NESP48681 1621 aa28.44■■■□□ 2.14
MSLN-207ENST00000566549 ARAP1Q96P48 1450 aa28.44■■■□□ 2.14
MSLN-207ENST00000566549 HNRNPUL2Q1KMD3 747 aaKnown RBP28.43■■■□□ 2.14
MSLN-207ENST00000566549 IGF1RP08069 1367 aa28.42■■■□□ 2.14
MSLN-207ENST00000566549 CARMIL1Q5VZK9 1371 aa28.31■■■□□ 2.12
MSLN-207ENST00000566549 DNAJC5BQ9UF47 199 aa28.3■■■□□ 2.12
MSLN-207ENST00000566549 RAD54L2Q9Y4B4 1467 aa28.28■■■□□ 2.12
MSLN-207ENST00000566549 ARHGAP35Q9NRY4 1499 aa28.27■■■□□ 2.12
MSLN-207ENST00000566549 KANK4Q5T7N3 995 aaPredicted RBP28.27■■■□□ 2.12
MSLN-207ENST00000566549 DNMBPQ6XZF7 1577 aa28.24■■■□□ 2.11
MSLN-207ENST00000566549 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
MSLN-207ENST00000566549 POLA1P09884 1462 aaPredicted RBP28.21■■■□□ 2.11
MSLN-207ENST00000566549 ABCA10Q8WWZ4 1543 aa28.12■■■□□ 2.09
MSLN-207ENST00000566549 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
MSLN-207ENST00000566549 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.09
MSLN-207ENST00000566549 P3H3Q8IVL6 736 aa28.07■■■□□ 2.08
MSLN-207ENST00000566549 PDS5BQ9NTI5 1447 aa28■■■□□ 2.07
MSLN-207ENST00000566549 TDRD9Q8NDG6 1382 aaKnown RBP27.98■■■□□ 2.07
MSLN-207ENST00000566549 ATP1B4Q9UN42 357 aaPredicted RBP27.93■■■□□ 2.06
MSLN-207ENST00000566549 RRBP1Q9P2E9 1410 aaKnown RBP27.9■■■□□ 2.06
MSLN-207ENST00000566549 ITGAEP38570 1179 aa27.89■■■□□ 2.06
MSLN-207ENST00000566549 FHOD3Q2V2M9 1422 aa27.89■■■□□ 2.05
MSLN-207ENST00000566549 KIF21AQ7Z4S6 1674 aa27.87■■■□□ 2.05
MSLN-207ENST00000566549 CUL7Q14999 1698 aa27.86■■■□□ 2.05
MSLN-207ENST00000566549 CCNB3Q8WWL7 1395 aa27.86■■■□□ 2.05
MSLN-207ENST00000566549 TIAM1Q13009 1591 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms